Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03723 and BL03729
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03723___yqzD.1.5803.seq
# -bsequence dna-align/BL03729___yqzD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03723___yqzD-BL03729___yqzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03723___yqzD-BL03729___yqzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03723___yqzD
# 2: BL03729___yqzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 355
# Identity: 272/355 (76.6%)
# Similarity: 272/355 (76.6%)
# Gaps: 5/355 ( 1.4%)
# Score: 1026.5
#
#
#=======================================
BSNT_03723___ 1 GTGGAAATTGCTATTATTGCGTTGTTTATCGTCAGTATAGCGCTAATTGC 50
||||||||||||||.||||||.||.|..|.||||||||.|||||.|||||
BL03729___yqz 1 GTGGAAATTGCTATCATTGCGCTGCTCGTTGTCAGTATTGCGCTGATTGC 50
BSNT_03723___ 51 ATTCTCATATTCTCAAAGAGACCCGATGAAAGATGTAGAACAGGAACTCG 100
|||||||||||.|||||||||.|||||.||.||.||.||||||||..|.|
BL03729___yqz 51 ATTCTCATATTTTCAAAGAGAACCGATCAAGGAAGTTGAACAGGAGTTGG 100
BSNT_03723___ 101 AAACACTGCAGCTTTCTGCGATGCAGGAAATTTACAAGCTCAAAAAGAAA 150
||||.||.|||||.||.||.|||||||||||.||.||.||.||||||||.
BL03729___yqz 101 AAACCCTTCAGCTGTCCGCCATGCAGGAAATCTATAAACTGAAAAAGAAG 150
BSNT_03723___ 151 ATGACAGTGCTTGAGGAAGAATTACTGGAAACAAACCTTGTCATTCGCAA 200
|||||.||||||||||||||..|.||.||..||||..|.|||.|.||||.
BL03729___yqz 151 ATGACCGTGCTTGAGGAAGAGCTCCTCGATTCAAATGTGGTCGTCCGCAG 200
BSNT_03723___ 201 ATC-AAAGCAGAGCGACATCAATCAAAAAATCGCTAAACAAATACTTTCT 249
|.| ||.|| ||..||||..||..|.||.||.||.||.||.|||||.
BL03729___yqz 201 ACCGAATGC----CGGAATCAGCCAGCATATTGCGAAGCAGATTCTTTCA 246
BSNT_03723___ 250 AAATATAATAACGGTATGTCAGCTGAAGCGATTGCTAAAGCTGAGCATGT 299
||||||.|.|||||.|||||.|..||.||.||.||.|||||||||||.||
BL03729___yqz 247 AAATATCAAAACGGCATGTCTGTAGACGCCATCGCAAAAGCTGAGCACGT 296
BSNT_03723___ 300 ATCAGTGGAAGACGTGAATACGATTATCAAGGATAATGAGAAGGTGCTCG 349
|||.||.|||||.||.||..||||.||.||.||.|||||||.||||||.|
BL03729___yqz 297 ATCTGTCGAAGATGTCAAAGCGATCATTAAAGACAATGAGAGGGTGCTTG 346
BSNT_03723___ 350 TATGA 354
|||||
BL03729___yqz 347 TATGA 351
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