Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03741 and BL03724
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence dna-align/BSNT_03741___yqfW.1.5803.seq
# -bsequence dna-align/BL03724.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03741___yqfW-BL03724.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03741___yqfW-BL03724.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03741___yqfW
# 2: BL03724
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity: 433/606 (71.5%)
# Similarity: 433/606 (71.5%)
# Gaps: 45/606 ( 7.4%)
# Score: 1537.5
#
#
#=======================================
BSNT_03741___ 1 ATGTTACGCTTAGGAATAGATATTGACGGCACAATCACGGCTCAGGATAC 50
|||||||..||||||||.||||||||.||.||.|||||.||.||||||||
BL03724 1 ATGTTACATTTAGGAATCGATATTGATGGAACGATCACTGCCCAGGATAC 50
BSNT_03741___ 51 ATTCGTCCCTTATTTGAACCGTTCGTTTAATCTTTCCATTTCATTAAACG 100
.||.||.||.|||||||||...|||||.|..||.||||||.||||..|.|
BL03724 51 TTTTGTTCCCTATTTGAACGAGTCGTTCAGCCTCTCCATTACATTGGAAG 100
BSNT_03741___ 101 ATATGACGGATTATGATTTAACAAAGCTGTTAAACATTACCCAGGAAGAA 150
||||.|.|||.|||||..|.|||||||||.|.||.||..|.||.|||||.
BL03724 101 ATATTAAGGAATATGACCTGACAAAGCTGCTGAATATATCTCAAGAAGAT 150
BSNT_03741___ 151 TTTTGGGATTGGATGAATCAAAATGAAGCGATCATATATAAGGAAGCATT 200
||||||.|.||||||||..||||.||..|...|||.|||.||||||||||
BL03724 151 TTTTGGAAATGGATGAACGAAAACGAGCCCCGCATCTATCAGGAAGCATT 200
BSNT_03741___ 201 GCTTGCACAGCATGCGAAACAGTCACTTGATCTTCTCAAAGAGGAGCACA 250
|||.||.||..||||.||||||.|.||.|||...||.|||.||.||||.|
BL03724 201 GCTGGCTCAATATGCCAAACAGACGCTGGATGAGCTGAAAAAGCAGCATA 250
BSNT_03741___ 251 AGCTTATTTATATTACAGCGAGACGGAC-TCATTTAACT----GATATTA 295
||||.||.|||||||||||.||| .||| || |.|| |||||.|
BL03724 251 AGCTGATATATATTACAGCAAGA-AGACATC----ACCTGGAGGATATCA 295
BSNT_03741___ 296 CCTATGAATGGTTTGACAGACAAAACATTCATTATGACCACATCGAACTC 345
|||||||.|||||.||.|.||...||||||||||||||||.||.|||||.
BL03724 296 CCTATGACTGGTTCGAGAAACGCGACATTCATTATGACCATATAGAACTT 345
BSNT_03741___ 346 GTTGGCGGTCATCACAAAGTTGAAGCGGTC--AAGAATCATAACATCGAC 393
||.||||||||..|.|||.|.|||||.||| .||| |||.|.|||||
BL03724 346 GTCGGCGGTCACGATAAATTGGAAGCCGTCTTCAGA--CATGAGATCGA- 392
BSNT_03741___ 394 CTGTTT--TTTGAGGATCATCACGGGAACGCCATGATGATTGCGAAAGAA 441
||||| |||||.||.||.||||||||.||.|..|||||.||.||||||
BL03724 393 -TGTTTTCTTTGAAGACCACCACGGGAATGCAACCATGATCGCAAAAGAA 441
BSNT_03741___ 442 GCCGGGATACCGGTGATTTTGTTCAATTCCCCTTATAATCAGCTTCCGAT 491
||.||.||.||.||..|.|||||.|||.|.||.||.|||||||||||||.
BL03724 442 GCAGGCATTCCTGTTCTGTTGTTTAATACGCCGTACAATCAGCTTCCGAC 491
BSNT_03741___ 492 TGATTCAAACATCATCAGAGTAAACAACTGGCTAGAAGCCGTTCAATGGA 541
.||||||||||||.|||||||..|||.||||||.|||||||...|||||.
BL03724 492 CGATTCAAACATCGTCAGAGTCGACAGCTGGCTTGAAGCCGCCGAATGGC 541
BSNT_03741___ 542 TGAACAACAACAAGCATCACTTAATACGCGTCAA---------------T 576
||||.||.|||.|| ||.||||.|.|| |
BL03724 542 TGAAAAAGAACGAG--------AAAACGCTTAAAGCCGCAAAAAGCATGT 583
BSNT_03741___ 577 AACTGA 582
||
BL03724 584 AA---- 585
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