Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03741 and BL03724

See Amino acid alignment / Visit BSNT_03741 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence dna-align/BSNT_03741___yqfW.1.5803.seq
#    -bsequence dna-align/BL03724.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03741___yqfW-BL03724.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03741___yqfW-BL03724.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03741___yqfW
# 2: BL03724
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity:     433/606 (71.5%)
# Similarity:   433/606 (71.5%)
# Gaps:          45/606 ( 7.4%)
# Score: 1537.5
# 
#
#=======================================

BSNT_03741___      1 ATGTTACGCTTAGGAATAGATATTGACGGCACAATCACGGCTCAGGATAC     50
                     |||||||..||||||||.||||||||.||.||.|||||.||.||||||||
BL03724            1 ATGTTACATTTAGGAATCGATATTGATGGAACGATCACTGCCCAGGATAC     50

BSNT_03741___     51 ATTCGTCCCTTATTTGAACCGTTCGTTTAATCTTTCCATTTCATTAAACG    100
                     .||.||.||.|||||||||...|||||.|..||.||||||.||||..|.|
BL03724           51 TTTTGTTCCCTATTTGAACGAGTCGTTCAGCCTCTCCATTACATTGGAAG    100

BSNT_03741___    101 ATATGACGGATTATGATTTAACAAAGCTGTTAAACATTACCCAGGAAGAA    150
                     ||||.|.|||.|||||..|.|||||||||.|.||.||..|.||.|||||.
BL03724          101 ATATTAAGGAATATGACCTGACAAAGCTGCTGAATATATCTCAAGAAGAT    150

BSNT_03741___    151 TTTTGGGATTGGATGAATCAAAATGAAGCGATCATATATAAGGAAGCATT    200
                     ||||||.|.||||||||..||||.||..|...|||.|||.||||||||||
BL03724          151 TTTTGGAAATGGATGAACGAAAACGAGCCCCGCATCTATCAGGAAGCATT    200

BSNT_03741___    201 GCTTGCACAGCATGCGAAACAGTCACTTGATCTTCTCAAAGAGGAGCACA    250
                     |||.||.||..||||.||||||.|.||.|||...||.|||.||.||||.|
BL03724          201 GCTGGCTCAATATGCCAAACAGACGCTGGATGAGCTGAAAAAGCAGCATA    250

BSNT_03741___    251 AGCTTATTTATATTACAGCGAGACGGAC-TCATTTAACT----GATATTA    295
                     ||||.||.|||||||||||.||| .||| ||    |.||    |||||.|
BL03724          251 AGCTGATATATATTACAGCAAGA-AGACATC----ACCTGGAGGATATCA    295

BSNT_03741___    296 CCTATGAATGGTTTGACAGACAAAACATTCATTATGACCACATCGAACTC    345
                     |||||||.|||||.||.|.||...||||||||||||||||.||.|||||.
BL03724          296 CCTATGACTGGTTCGAGAAACGCGACATTCATTATGACCATATAGAACTT    345

BSNT_03741___    346 GTTGGCGGTCATCACAAAGTTGAAGCGGTC--AAGAATCATAACATCGAC    393
                     ||.||||||||..|.|||.|.|||||.|||  .|||  |||.|.||||| 
BL03724          346 GTCGGCGGTCACGATAAATTGGAAGCCGTCTTCAGA--CATGAGATCGA-    392

BSNT_03741___    394 CTGTTT--TTTGAGGATCATCACGGGAACGCCATGATGATTGCGAAAGAA    441
                      |||||  |||||.||.||.||||||||.||.|..|||||.||.||||||
BL03724          393 -TGTTTTCTTTGAAGACCACCACGGGAATGCAACCATGATCGCAAAAGAA    441

BSNT_03741___    442 GCCGGGATACCGGTGATTTTGTTCAATTCCCCTTATAATCAGCTTCCGAT    491
                     ||.||.||.||.||..|.|||||.|||.|.||.||.|||||||||||||.
BL03724          442 GCAGGCATTCCTGTTCTGTTGTTTAATACGCCGTACAATCAGCTTCCGAC    491

BSNT_03741___    492 TGATTCAAACATCATCAGAGTAAACAACTGGCTAGAAGCCGTTCAATGGA    541
                     .||||||||||||.|||||||..|||.||||||.|||||||...|||||.
BL03724          492 CGATTCAAACATCGTCAGAGTCGACAGCTGGCTTGAAGCCGCCGAATGGC    541

BSNT_03741___    542 TGAACAACAACAAGCATCACTTAATACGCGTCAA---------------T    576
                     ||||.||.|||.||        ||.||||.|.||               |
BL03724          542 TGAAAAAGAACGAG--------AAAACGCTTAAAGCCGCAAAAAGCATGT    583

BSNT_03741___    577 AACTGA    582
                     ||    
BL03724          584 AA----    585


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