Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03745 and BL03723

See Amino acid alignment / Visit BSNT_03745 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence dna-align/BSNT_03745___yqfT.1.5803.seq
#    -bsequence dna-align/BL03723.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03745___yqfT-BL03723.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03745___yqfT-BL03723.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03745___yqfT
# 2: BL03723
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     175/281 (62.3%)
# Similarity:   175/281 (62.3%)
# Gaps:          52/281 (18.5%)
# Score: 525.5
# 
#
#=======================================

BSNT_03745___      1 ATGATTTTATTTCAAAGAATTATTTTACAGCGGCTTAATCAGGCTACTGC     50
                     .|||||||||||||||..||..|..|.|||||..|.|||||||..||.||
BL03723            1 GTGATTTTATTTCAAAAGATCGTGCTGCAGCGTTTAAATCAGGTCACGGC     50

BSNT_03745___     51 TGATGATTTGCTGAAGTACTCAAAACAATACGGAAT--CAGCTTAACAAG     98
                     |||.||..|||||||||||.|.||||||||||||||  .||  |||||||
BL03723           51 TGACGAGGTGCTGAAGTACGCTAAACAATACGGAATTCAAG--TAACAAG     98

BSNT_03745___     99 ATCGCAGGCAGTTGAAGTAGCGAA-CCTGTTATACGGGAAAAATGTAAAC    147
                     |...|||||..|||||||.|..|| |.|||.| |.||.|||||..|.||.
BL03723           99 AAAACAGGCGCTTGAAGTGGAAAAGCTTGTGA-AAGGAAAAAACATCAAT    147

BSNT_03745___    148 ATCTTTAATGAGAG-TGAACG-----AATGCGGCTGCTGAAACAAGTAGA    191
                     ||.|||||||| || .|||||     ||     |||||.||.|||||.||
BL03723          148 ATTTTTAATGA-AGAAGAACGCAATAAA-----CTGCTCAAGCAAGTGGA    191

BSNT_03745___    192 GACGATTACATCGAAAGAAACAGCTCAAACAGTTAATG-AACTATTCAAA    240
                     ..||.|.||.||.||||||.|.|             || |.|||||.||.
BL03723          192 AGCGGTCACTTCAAAAGAAGCGG-------------TGCAGCTATTGAAC    228

BSNT_03745___    241 CA---ATTTACAAGCTAA-------------    255
                     ||   .|||    |||.|             
BL03723          229 CAGCTGTTT----GCTCAATACGTATCATAA    255


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