Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03726 and BL03715

See Amino acid alignment / Visit BSNT_03726 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence dna-align/BSNT_03726___pstBB.1.5803.seq
#    -bsequence dna-align/BL03715___pstBB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03726___pstBB-BL03715___pstBB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03726___pstBB-BL03715___pstBB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03726___pstBB
# 2: BL03715___pstBB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 797
# Identity:     561/797 (70.4%)
# Similarity:   561/797 (70.4%)
# Gaps:          31/797 ( 3.9%)
# Score: 1855.5
# 
#
#=======================================

BSNT_03726___      1 ATGAGTATTGCTACCGAAGCCGTAATGAAACAGGAAGTCTATCAAGTCAA     50
                     |||||...||..||   |||.||||.|..|.|.||.||.||.||..||||
BL03715___pst      1 ATGAGCGCTGTAAC---AGCTGTAAAGCCAGAAGATGTATACCAGATCAA     47

BSNT_03726___     51 TGGAATGAACTTATGGTATGGACAGCATCATGCTTTAAAAAATATCAATT    100
                     .|...||||.||||||||.||..|.|||||.||.|||||.||.||.||.|
BL03715___pst     48 CGACTTGAATTTATGGTACGGCGAACATCACGCATTAAAGAACATTAACT     97

BSNT_03726___    101 TGAGCATT-------TATGAAAATGAGGTTACGGCGATTATCGGTCCATC    143
                     ||| ||.|       ||.||||      ||||.||.||.||.||.||.||
BL03715___pst     98 TGA-CAATACCCGAGTACGAAA------TTACCGCCATCATTGGACCGTC    140

BSNT_03726___    144 CGGATGCGGGAAATCGACCTTTATCAAGACATTGAATTTAATGATTCAA-    192
                     .||.|||||.||.|||||.||.||.||.||..|||||.|.|||| |||| 
BL03715___pst    141 AGGGTGCGGAAAGTCGACATTCATTAAAACGCTGAATCTCATGA-TCAAT    189

BSNT_03726___    193 ATGACGCCAAATGTAAAGCTTGCAGGTGAGCTGAACTATAATGGCAGCAA    242
                     |||...||.|||||.||..|..|.||.|||.|.|.|||.||.||.|..||
BL03715___pst    190 ATGGTTCCGAATGTCAAAATGACCGGAGAGATCAGCTACAACGGAACGAA    239

BSNT_03726___    243 CATTTTAAAGGATAAAGTGGACATCGTGGATTTACGGAAAAATATCGGCA    292
                     |.|..|.||....|||||.|||.|.||.||.|||||||||||..||||||
BL03715___pst    240 CGTACTCAACAGCAAAGTCGACCTTGTCGAGTTACGGAAAAAAGTCGGCA    289

BSNT_03726___    293 TGGTATTCCAAAAAGGGAACCCGTTTCCGCAATCTATTTTTGATAATGTG    342
                     ||||.||.||||||||.|||||||||||.||.||.||.|||||||||||.
BL03715___pst    290 TGGTGTTTCAAAAAGGAAACCCGTTTCCCCAGTCGATCTTTGATAATGTC    339

BSNT_03726___    343 GCTTACGGACCGAGAGTCCACGGCACCAAAAA-TAAGAAGAAGCTTCAGG    391
                     ||.||||||||.|||.||||.||....||||| .||.||||| ||..|.|
BL03715___pst    340 GCATACGGACCAAGAATCCATGGATTGAAAAACAAAAAAGAA-CTGAATG    388

BSNT_03726___    392 AAATTGTGGAAAAGTCATTAAAAGACGTGGCGTTATGGGATGAGGTGAAG    441
                     |.|..|||||||||.|..|....||.||.|||.|.||||||||.|||||.
BL03715___pst    389 AGAGAGTGGAAAAGGCGCTTGTGGATGTAGCGCTGTGGGATGAAGTGAAA    438

BSNT_03726___    442 GATCGATTGCATACGTCC---GCTCTTTCG--CTGTCAGGGGGCCAGCAG    486
                     ||.||..|.|||   |||   ||.|  |||  ||.||.|||||.||||||
BL03715___pst    439 GACCGTCTTCAT---TCCCAGGCGC--TCGGACTTTCCGGGGGGCAGCAG    483

BSNT_03726___    487 CAGCGTCTTTGCATCGCCAGAGCACTTGCGACCAATCCTGATATTTTGCT    536
                     |||||.||.||||||||.||.||.||.||.|||||||||||..||.|..|
BL03715___pst    484 CAGCGCCTCTGCATCGCAAGGGCGCTGGCCACCAATCCTGACGTTCTCTT    533

BSNT_03726___    537 GATGGATGAACCGACATCTGCACTAGATCCAATCTCAACGAGAAAAATTG    586
                     ||||||||||||||||||.||.||.|||||..|.|||||....|||||.|
BL03715___pst    534 GATGGATGAACCGACATCCGCCCTTGATCCCGTTTCAACTTTGAAAATCG    583

BSNT_03726___    587 AAGAACTCATTCTAGAGCTAAAAAATAAATATACAATTGTCATTGTCACG    636
                     ||||.||.||.||..||||.|||.|.|||||||||||||.|||.||||||
BL03715___pst    584 AAGAGCTGATGCTCAAGCTGAAAGAGAAATATACAATTGCCATCGTCACG    633

BSNT_03726___    637 CATAACATGCAGCAGGCAGCAAGGGTTTCTGATCAAACCGCCTTTTTCTA    686
                     ||.||||||||||||||..|.||..||||.||||||||.||.||||||..
BL03715___pst    634 CACAACATGCAGCAGGCCTCGAGAATTTCCGATCAAACGGCGTTTTTCCT    683

BSNT_03726___    687 CATGGGCGAGCTTGTTGAATGCGACAATACGAATAAAATGTTCTCTAACC    736
                     .|||||||||||..||||.|||.|..|||||...||||||||.||.|..|
BL03715___pst    684 GATGGGCGAGCTGATTGAGTGCAATGATACGGTCAAAATGTTTTCAAGTC    733

BSNT_03726___    737 CGAAGGACCAAAGAACGCTCGATTACATTTCAGGAAAGTTTGGATGA    783
                     |..|.||.||..|.|||...|||||.||..||||...|||.||||||
BL03715___pst    734 CTGACGATCATCGGACGAAAGATTATATAACAGGCCGGTTCGGATGA    780


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