Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03727 and BL03714
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:45
# Commandline: needle
# -asequence dna-align/BSNT_03727___pstBA.1.5803.seq
# -bsequence dna-align/BL03714___pstBA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03727___pstBA-BL03714___pstBA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03727___pstBA-BL03714___pstBA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03727___pstBA
# 2: BL03714___pstBA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 901
# Identity: 608/901 (67.5%)
# Similarity: 608/901 (67.5%)
# Gaps: 101/901 (11.2%)
# Score: 1955.5
#
#
#=======================================
BSNT_03727___ 1 ATGGCTTGGCACGATGATCTACAAGAAGCTTACGGCAAATTAGAACGGAA 50
|||||| ||.|.| .|||.|| ||| || ..||||
BL03714___pst 1 ATGGCT---CAGGTT-------CAGATGC---CGG----TT---TTGGAA 30
BSNT_03727___ 51 AGAG---GCGAAAAACATGTCTGAA-CAAATGGTAAAAGAAAAACCTGAG 96
|..| ||||.| ||.||.||| |
BL03714___pst 31 ACCGTGCGCGACA---ATATCGGAATC----------------------- 54
BSNT_03727___ 97 CGAGCTGTTATTGTTCC--GAAGCAGA---ACCACGTGCTTGAGGTCAAA 141
||| ..||||| ||||| || |.||..|..|.||.||.|||
BL03714___pst 55 ---GCT----CCGTTCCCTGAAGC-GAAAGAGCATATTTTAGAAGTGAAA 96
BSNT_03727___ 142 GATCTGTCTATTTTTTACGGAAATAAACAAGCCGTTCA---TCATGTAAA 188
.||.|...|||||..||.|||.|.||.|..|||| ||| .|||.| .
BL03714___pst 97 AATTTAAATATTTACTATGGAGAAAAGCGGGCCG-TCAACGACATTT--C 143
BSNT_03727___ 189 CATGGATATTGAAAAAAATGCGGTGACTGCTTTAATTGGGCCGTCGGGAT 238
||||..||||||.|||.|||||||.||.|||||.||.||.|||||.||.|
BL03714___pst 144 CATGCGTATTGACAAACATGCGGTCACGGCTTTGATCGGTCCGTCAGGCT 193
BSNT_03727___ 239 GCGGAAAATCTACTTTTTTGAGAAATATTAACCGAATGAACGATTTAATT 288
||||||||||.||||||||.||||..||.|||||.|||||||||.|.|||
BL03714___pst 194 GCGGAAAATCGACTTTTTTAAGAAGCATCAACCGGATGAACGATCTGATT 243
BSNT_03727___ 289 CCATCTGCAAGA----GCGGAAGGTGAAATCCTTTATGAAGGATTAAATA 334
|||||.||.||| .|||| |||||.|..||||||||..|.||.|
BL03714___pst 244 CCATCAGCCAGAACATCCGGA----GAAATACGGTATGAAGGGCTTAACA 289
BSNT_03727___ 335 T-----ATTGGGCGGCAATATTAACGTTGTCAGCTTGAGAAGAGAAATCG 379
| ||| .||||||.||.||.||||...|||||||.||.||||
BL03714___pst 290 TCCTTGATT-----CCAATATCAATGTCGTCAATCTGAGAAGGGAGATCG 334
BSNT_03727___ 380 GAATGGTTTTCCAAAAACCAAATCCATTTCCGAAATCGATCTA-TGCGAA 428
|.|||||.||.||.||.||.||.||.|||||.||||||||.|| .|| ||
BL03714___pst 335 GCATGGTATTTCAGAAGCCGAACCCCTTTCCAAAATCGATTTACAGC-AA 383
BSNT_03727___ 429 TATCACACATGCATTGAAATATGCCGGAGAGCGGAATAAAGCTGTTTTAG 478
.||.||.||.|||||.||||||||.||.||.|||...|||.|.||..|.|
BL03714___pst 384 CATTACCCACGCATTAAAATATGCGGGCGAACGGCGGAAATCCGTGCTTG 433
BSNT_03727___ 479 ATGGAATTGTGGAAGAAAGTTTAACAAAAGCGGCTCTCTGGGATGAGGTG 528
|||..||.|||||||||||.||.||.|||||.||.||.||||||||.|||
BL03714___pst 434 ATGAGATCGTGGAAGAAAGCTTGACGAAAGCCGCGCTGTGGGATGAAGTG 483
BSNT_03727___ 529 AAGGATCGTTTACATTCATCCGCACTCTCGTTATCCGGCGGCCAGCAGCA 578
||.||..|..|.|||...||.||.||.|||.|.||.|||||.||||||||
BL03714___pst 484 AAAGACAGGCTGCATGAGTCGGCTCTTTCGCTGTCAGGCGGGCAGCAGCA 533
BSNT_03727___ 579 GCGTTTATGCATCGCGAGAACGCTTGCGATGAAGCCGGCTGTTCTTCTGC 628
||||.|.||||||||..|.|||||.|||||||||||.|..||.||.|| |
BL03714___pst 534 GCGTCTCTGCATCGCCCGGACGCTCGCGATGAAGCCCGAAGTCCTGCT-C 582
BSNT_03727___ 629 TT-GATGAACCAGCTTCAGCGCTTGATCCGATTTCAAATGCGAAAATAGA 677
|| |||||.||.|||||||||||.||.|||||||||||.|||||||||||
BL03714___pst 583 TTGGATGAGCCTGCTTCAGCGCTCGACCCGATTTCAAACGCGAAAATAGA 632
BSNT_03727___ 678 GGAATTAATTACAGGATTGAAAAGA-GAATACTCAATTATTATTGTCACG 726
|||||||||....|| ||.|||||| ||||||||.||.||.|||||||||
BL03714___pst 633 GGAATTAATCGTCGG-TTTAAAAGAGGAATACTCGATCATCATTGTCACG 681
BSNT_03727___ 727 CACAATATGCAGCAGGCTCTGCGGGTTTCTGACCGGACGGCATTCTTTTT 776
||.||.||||||||.|||....|..||||.||.|..|||||.||.||..|
BL03714___pst 682 CATAACATGCAGCAAGCTTCAAGAATTTCCGATCAAACGGCGTTTTTCCT 731
BSNT_03727___ 777 AAACGGCGAGCTTGTAGAATACGGACAGACCGAACAGATTTTCACGAGTC 826
.|||||.||..|..|.|||||||..|..||.|||.|||||||.|.||.||
BL03714___pst 732 TAACGGAGATTTAATCGAATACGATCGTACGGAAAAGATTTTTATGAATC 781
BSNT_03727___ 827 C----GAAAAAGCAAAAGACAGAGGATTATATTAATGGGAAATTCGGATA 872
| |||| ||||||||||||||||.||.||.||.|.|||.|||||
BL03714___pst 782 CTTCAGAAA----AAAAGACAGAGGATTACATCAACGGCAGATTTGGATA 827
BSNT_03727___ 873 G 873
.
BL03714___pst 828 A 828
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