Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03733 and BL03707
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence dna-align/BSNT_03733___yqgE.1.5803.seq
# -bsequence dna-align/BL03707___yqgE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03733___yqgE-BL03707___yqgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03733___yqgE-BL03707___yqgE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03733___yqgE
# 2: BL03707___yqgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1326
# Identity: 947/1326 (71.4%)
# Similarity: 947/1326 (71.4%)
# Gaps: 72/1326 ( 5.4%)
# Score: 3186.0
#
#
#=======================================
BSNT_03733___ 1 ATGAGCAAACTAAAAAAAGTGATAGGCGATGTAGACGTAAACAAAGGGTT 50
|||||||.|.|.|||||..|.|||||||||||.||..||||| ||||
BL03707___yqg 1 ATGAGCAGAATCAAAAACATAATAGGCGATGTGGAATTAAAC--AGGG-- 46
BSNT_03733___ 51 A-CTCTTTCTGCTGAC---CA-TTGGCGGGCTTTACTCGCTGGGAATTGC 95
| |||.|.|||||| | || |.|||||.|||||.||.||..|.|||||
BL03707___yqg 47 ACCTCCTGCTGCTG-CTTGCAGTCGGCGGCCTTTATTCTCTTAGCATTGC 95
BSNT_03733___ 96 ACTGTCCAATACTTTTGTTAATGTGTATCTTTGGAAGCAGTCAGGGAAAT 145
.||.||||||||.|||||.|||||.|||||.|||||||||||.||..|.|
BL03707___yqg 96 CCTTTCCAATACGTTTGTGAATGTATATCTGTGGAAGCAGTCCGGACAGT 145
BSNT_03733___ 146 TTATTGATTTGGCGATATATAATTTATCCATTGTGACAATGCAGCCGATA 195
||.|.||||||||.||.||||||||.||.||.||....|||||||||||.
BL03707___yqg 146 TTGTCGATTTGGCCATTTATAATTTGTCGATCGTCGTGATGCAGCCGATT 195
BSNT_03733___ 196 ACCTTTTAT-TTGGCTGGACGGTTAGCCAAAAAAATAGACAGGGTATTCA 244
|.| ||||| ||.||.||.||..|.|||||||||||.||||||||.||.|
BL03707___yqg 196 ATC-TTTATGTTCGCCGGCCGCCTTGCCAAAAAAATCGACAGGGTTTTTA 244
BSNT_03733___ 245 TTTTAAGGTTCGGCGTCATT--TTTTTAGCTGCCTTTTATTTAAGTGTGC 292
|..|.|||||.||||| || ||||||||||..||||||||||.|||||
BL03707___yqg 245 TACTCAGGTTTGGCGT--TTCGTTTTTAGCTGTATTTTATTTAACTGTGC 292
BSNT_03733___ 293 TTTTAGCCGGAGAAACGGCGG--CCAGCCGCCTCGTGCTAATCGGCGCGG 340
|.||.||.||.||||..|||| .|| ||.||.|||||..||||....|
BL03707___yqg 293 TGTTGGCGGGGGAAAATGCGGGATCA--CGGCTGGTGCTGCTCGGAAGTG 340
BSNT_03733___ 341 TGCTCGGAGTGGGCTATGGCTTTTATTGGCTAGCGTTTAACGTACTGACC 390
||||||||.|.|||||.||.|||||||||||.||||||||.||.|||||.
BL03707___yqg 341 TGCTCGGAATTGGCTACGGATTTTATTGGCTTGCGTTTAATGTCCTGACA 390
BSNT_03733___ 391 TTTGAAATAACAGAGCCGGATACACGAGACTTTTTCAACGGGTTTATGGG 440
||||||||.||.||||||||.||..||||.|||||.||||||||..|.||
BL03707___yqg 391 TTTGAAATCACTGAGCCGGACACGAGAGATTTTTTTAACGGGTTCCTCGG 440
BSNT_03733___ 441 CATTCTTTCTTCCTCTGCAGGAATGATCGGCCCGATTGTAGCCGGATTCG 490
||||.|...||||...||.|||||||||||.||||||||.|||||.|..|
BL03707___yqg 441 CATTTTAAATTCCGGCGCGGGAATGATCGGTCCGATTGTTGCCGGCTATG 490
BSNT_03733___ 491 TGATCTCAAGGCTTGAAAATAATACGGGTTATACAGTGATTTTCAGTCTC 540
|.||.||||||||||...|.||.|||||.||.||.|||||||||||.||.
BL03707___yqg 491 TCATTTCAAGGCTTGCCGACAACACGGGATACACGGTGATTTTCAGCCTG 540
BSNT_03733___ 541 TCCCTCAGTTTATTTGCCCTGGCTGTCGTGATGAGCTTTTTCTTAAAACG 590
|||.|...|||||||.|..||||.|||.|.|.|||||||||.||||||.|
BL03707___yqg 541 TCCTTGGCTTTATTTTCAGTGGCCGTCATTACGAGCTTTTTTTTAAAAAG 590
BSNT_03733___ 591 GAGAGAATCAAAGGGCCGTTTTATGCTGAGCAAAGTATTTGGA--GAGCG 638
|.|.|||||....|||||.|..||..||| |||..||.|||| ||.||
BL03707___yqg 591 GCGTGAATCGCGCGGCCGCTACATTTTGA--AAAAAATCTGGACGGAACG 638
BSNT_03733___ 639 CCAT--AGCAATATGAATTGGCGGAGAATCACGAATGCGCATTTTTTTCA 686
..|| || |...|||||||||.||.||.||.|||||.|||||||||||
BL03707___yqg 639 AAATTCAG--ACCCGAATTGGCGCAGCATTACAAATGCTCATTTTTTTCA 686
BSNT_03733___ 687 GGGTTTGAGAGAAGGGATTTTTGTCTTTTTAATCAGTGTGTTTGTATTTA 736
|||..||||||||||||||||.||.||||||||||.|||.|||||.||||
BL03707___yqg 687 GGGGCTGAGAGAAGGGATTTTCGTTTTTTTAATCAATGTCTTTGTCTTTA 736
BSNT_03733___ 737 TTGAGACAAACAGTGAACTTGCTCTCGGTACATTCGGTCTTG-TCAATTC 785
|...||||||.||.||..|.||..|.||.|..||||| |||| |.|||||
BL03707___yqg 737 TCACGACAAAGAGCGAGTTGGCATTGGGGAAGTTCGG-CTTGATTAATTC 785
BSNT_03733___ 786 AGCTGTTTCCTTCTTTGCCTACTACTTTGCATCCAGGCTGATTAAGAAAA 835
|||||||||.||.|||||.|||||.||.|||.|..||||.||| ||||
BL03707___yqg 786 AGCTGTTTCTTTTTTTGCATACTATTTCGCAACGCGGCTTATT---AAAA 832
BSNT_03733___ 836 AG---GCGAGAAAAAAATCGATTTTGCTGGGCGGACTTATTTTGTATGGC 882
|| |||.|.|||||..|||||||..|||||||.||..|..|||..|||
BL03707___yqg 833 AGGGAGCGCGCAAAAAGGCGATTTTAATGGGCGGTCTCGTCCTGTTCGGC 882
BSNT_03733___ 883 GCGCTGTTTTTGATTCTGTTCCATATGAGCTTTTCGACATTATTAACGTA 932
||.||.|||.|||||.||||.|||||||..|.|..|||..|.||...|||
BL03707___yqg 883 GCTCTCTTTCTGATTTTGTTTCATATGACGTATGTGACGCTTTTGCTGTA 932
BSNT_03733___ 933 CGGCGTTTTTATTGCCATCGGCTATCCTCTGTTGCTTGTGCCATATGTAT 982
.|..|||...|||||.|||||||||||..|.|||||.||.||.|||..||
BL03707___yqg 933 TGCTGTTGCGATTGCGATCGGCTATCCGATTTTGCTCGTACCGTATTCAT 982
BSNT_03733___ 983 CACTTACATATGATGTGATAGGGAACGCGAGGCATGCCAGAAAAGCAAGA 1032
|.||.||||||||||||||.||.||.||||||.|||||.|.|||||..|.
BL03707___yqg 983 CGCTCACATATGATGTGATCGGTAAAGCGAGGTATGCCCGGAAAGCGCGG 1032
BSNT_03733___ 1033 ATTGAATATATCGTGCTTAGAGAAATGTTCTTGAATGCCGGCAGAATTGT 1082
||.|||||.||.||..|.||||||.|.||.||.||...|||..|.|||||
BL03707___yqg 1033 ATCGAATACATTGTCGTCAGAGAAGTTTTTTTAAACATCGGACGGATTGT 1082
BSNT_03733___ 1083 TTCCATTTTGTGCTTTCTCCTGATCATGGCCCTTCTGAAAGAGGATGTGG 1132
.||.||||||...|||.|.|||.||.||.|.||||||||.|||||..|||
BL03707___yqg 1083 CTCGATTTTGGTTTTTTTGCTGCTCGTGTCGCTTCTGAAGGAGGACTTGG 1132
BSNT_03733___ 1133 GAATTCC--TTTGTCAC---TTGCGATATTGGGTATAGGACATCCTTTGA 1177
|.||||| |||.||.| |||| ||||...|||.||..|..|||
BL03707___yqg 1133 GCATTCCGGTTTCTCTCGTTTTGC-----TGGGGGCAGGCCACACGCTGA 1177
BSNT_03733___ 1178 TTTATTACTTTGTCAAGGATATCCGTTTTAAGGAGAAAGAAG-------G 1220
|.||.||.||.|||||.|||||||||.| ||.|| || |
BL03707___yqg 1178 TCTACTATTTCGTCAAAGATATCCGTCT------GACAG-AGCCCGCCCG 1220
BSNT_03733___ 1221 GGAAAATGAAACCAAGGAAGAAGACGGCCAAAAACGGGTAACA---GAAC 1267
.||||..| ..|||| ||||.|..||.|||| .|||| ||||
BL03707___yqg 1221 CGAAACGG-----TCGGAA-AAGATGCGCATAAAC---AAACAGCTGAAC 1261
BSNT_03733___ 1268 CGACCCTGTTAAAAGGCGAGAGATAA 1293
|||.....|||.||||..|.||.|||
BL03707___yqg 1262 CGAATTATTTAGAAGGAAAAAGGTAA 1287
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