Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03742 and BL03703
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence dna-align/BSNT_03742___zur.1.5803.seq
# -bsequence dna-align/BL03703___zur.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03742___zur-BL03703___zur.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03742___zur-BL03703___zur.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03742___zur
# 2: BL03703___zur
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 344/446 (77.1%)
# Similarity: 344/446 (77.1%)
# Gaps: 22/446 ( 4.9%)
# Score: 1332.0
#
#
#=======================================
BSNT_03742___ 1 ATGAACGTACAAGAAGCGCTGAACCTACTAAAAGAAAACGGATATAAATA 50
.||||||||||.||||||||..|..||||.||.|||||.|||||||||||
BL03703___zur 1 GTGAACGTACAGGAAGCGCTTGATTTACTGAAGGAAAAAGGATATAAATA 50
BSNT_03742___ 51 TACAAACAAACGGGAGGATATGCTGCAGCTTTTTGCTGATTCAGACAGAT 100
|||||.||||||||||||||||||.|||||.|||..|||||||||.|.||
BL03703___zur 51 TACAAGCAAACGGGAGGATATGCTTCAGCTGTTTAGTGATTCAGATAAAT 100
BSNT_03742___ 101 ATCTTACCGCTAAAAACGTACTGTCTGCACTGAATGATGATTATCCAGGC 150
||.|.||.||.|||||.||.||.||.||..|.||||||||||||||.||.
BL03703___zur 101 ATTTAACGGCGAAAAATGTCCTTTCCGCTTTAAATGATGATTATCCGGGG 150
BSNT_03742___ 151 TTAAGCTTTGATACAATCTACAGAAATCTTTCTTTATATGAAGAACTTGG 200
.||||||||||||||||||||||.|||.|.||..|.|.|||||||||.||
BL03703___zur 151 CTAAGCTTTGATACAATCTACAGGAATTTGTCGCTGTTTGAAGAACTCGG 200
BSNT_03742___ 201 GATTTTGGAAACAACTGAGCTGTCCGGTGAAAAGCTCTTCCGATTTAAGT 250
.|||||||||||.||||||||.||||||||||||||.|||||.|||||.|
BL03703___zur 201 CATTTTGGAAACGACTGAGCTTTCCGGTGAAAAGCTGTTCCGTTTTAAAT 250
BSNT_03742___ 251 GTTCATTC-ACCCATCACCACCATCATTTTATTTGTCTTGCCTGCGGCAA 299
|||| ||| .|.||.||||||||.|||||||||||..|.|..||||||||
BL03703___zur 251 GTTC-TTCTGCTCACCACCACCACCATTTTATTTGCATGGTGTGCGGCAA 299
BSNT_03742___ 300 AACAAAGGAAATTGAATCATGTCCGATGGACAAGCTTTGTGATGATTTGG 349
|||.||.||||||||...||||||||||||.|||||....||.|||.|.|
BL03703___zur 300 AACGAAAGAAATTGAGCTATGTCCGATGGAAAAGCTGACAGACGATCTTG 349
BSNT_03742___ 350 ATGGCTATCAGGTCAGCGGGCATAAATTTGAGATTTATGGCACATGCCCT 399
|.|||||||||.|||||||.|||||.|||||.|||||.||.||.|||||
BL03703___zur 350 ACGGCTATCAGATCAGCGGCCATAAGTTTGAAATTTACGGAACCTGCCC- 398
BSNT_03742___ 400 GATTGTACAGCG----GAAAACCAAGAAAACACTACTGC---GTAA 438
||| ||| .||||||.|||....|| ||||
BL03703___zur 399 ---------GCGCTGTGAA---GAAGAAAGCACGGAAGCGCAGTAA 432
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