Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03746 and BL03699
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence dna-align/BSNT_03746___yqfS.1.5803.seq
# -bsequence dna-align/BL03699___nfo.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03746___yqfS-BL03699___nfo.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03746___yqfS-BL03699___nfo.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03746___yqfS
# 2: BL03699___nfo
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 900
# Identity: 688/900 (76.4%)
# Similarity: 688/900 (76.4%)
# Gaps: 39/900 ( 4.3%)
# Score: 2666.0
#
#
#=======================================
BSNT_03746___ 1 ---------------------------ATGAGCGGAAAACATATGCTTCT 23
||||||||||||||||||||.||
BL03699___nfo 1 TTGTTGAAAATCGGTTCACACGTCTCAATGAGCGGAAAACATATGCTGCT 50
BSNT_03746___ 24 GGCTGCAAGCCAGGAAGCAGTCTCTTATGGGGCGAATACGTTTATGATCT 73
.||.||.||.|||||.|||..|||.||.||.||.|||||.||||||||||
BL03699___nfo 51 TGCGGCCAGTCAGGAGGCAAGCTCCTACGGCGCCAATACATTTATGATCT 100
BSNT_03746___ 74 ATACAGGCGCACCGCAAAATACGCGCCGAAAGAAAATTGAAGACTTAAAT 123
||||.||.||.|||||.||.||||||.|.||.|||||.||.||.||.|||
BL03699___nfo 101 ATACGGGAGCGCCGCAGAACACGCGCAGGAAAAAAATCGAGGATTTGAAT 150
BSNT_03746___ 124 ATAGAAGCAGGCCGGGCACATATGCAAGAAAACGGCATTGACGAGATTAT 173
||.|||||.||..||||.||.|||.||||.||||||||....||.||..|
BL03699___nfo 151 ATTGAAGCGGGAAGGGCTCACATGGAAGAGAACGGCATCTCTGATATCGT 200
BSNT_03746___ 174 CGTACACGCGCCTTATATTATTAATATTGGCAACACGACAAATCCGTCCA 223
|||.||.||.||.||||||||.|||||||.|||.||.||.||||||.|||
BL03699___nfo 201 CGTTCATGCCCCGTATATTATCAATATTGCCAATACAACGAATCCGGCCA 250
BSNT_03746___ 224 CTTTTGAGCTGGGTGTTGATTTTCTT-CGTTCAGAAATTGAACGGACAGC 272
|.||||||||.|||||.|| .||||| |||||.|||||||||.||||..|
BL03699___nfo 251 CATTTGAGCTCGGTGTCGA-GTTCTTGCGTTCTGAAATTGAAAGGACGTC 299
BSNT_03746___ 273 GGCCATCGGAGCGAAGCAAATTGTCCTTCATCCTGGTGCTCACGTAGGGG 322
|||.|||||.||.|..|||||.||.|||||.||.||.|||||.|||||.|
BL03699___nfo 300 GGCGATCGGCGCCAGACAAATCGTTCTTCACCCGGGAGCTCATGTAGGCG 349
BSNT_03746___ 323 CAGGAGCTGAAGCCGGCATCAAAAAAATTATTGAAGGCTTAAATGAAGTG 372
||||.||.|||.|.|||||..|||||||.||.|||||.||.||.||.||.
BL03699___nfo 350 CAGGCGCAGAAACGGGCATTCAAAAAATCATCGAAGGATTGAACGAGGTC 399
BSNT_03746___ 373 ATTGATCCGAATCAAAATGTCCAGATTGCATTAGAAACAATGGCTGGAAA 422
||.||.||||||||.|||||.|||||.||.||.|||||.|||||.||.||
BL03699___nfo 400 ATCGACCCGAATCAGAATGTGCAGATCGCTTTGGAAACGATGGCCGGGAA 449
BSNT_03746___ 423 AGGATCGGAATGC-GGCAGAAGCTTTGAGGAGCTTGCACAGATTATCGAA 471
|||.||.|||||| |||.||.| ||||||||||||||||||||.|||||.
BL03699___nfo 450 AGGTTCAGAATGCGGGCGGACG-TTTGAGGAGCTTGCACAGATCATCGAC 498
BSNT_03746___ 472 GGCGTTACACACAATGAGCAGCTGTCAGTGTGCTTTGACACGTGCCATAC 521
||||||||||||||.|||||..|.||.||.|||||.||.||.||||||||
BL03699___nfo 499 GGCGTTACACACAACGAGCATTTATCCGTCTGCTTCGATACATGCCATAC 548
BSNT_03746___ 522 ACATGATGCCGGGTATAACATTGTCGAA---GACTTTGACGGAGTGCTGA 568
.|||||.||.|| |.||..|||.|.| |||||||||||.||..|.|
BL03699___nfo 549 CCATGACGCGGG---TTACGATGTAGTATCCGACTTTGACGGTGTCTTAA 595
BSNT_03746___ 569 ACGAGTTCGATAAAATCATTGGCATTGACCGTATTAAAGTGCTTCATATC 618
||||.|||||||||||..|.||.||.||||||.|.||||||||||||||.
BL03699___nfo 596 ACGAATTCGATAAAATTGTCGGAATCGACCGTTTAAAAGTGCTTCATATT 645
BSNT_03746___ 619 AATGACAGCAAAAATGTCAAAGGTGCGAGAAAAGACCGCCATGAAAATAT 668
|||||||||||.|||||||.||||||||||||.||||||||.|||||.||
BL03699___nfo 646 AATGACAGCAAGAATGTCAGAGGTGCGAGAAAGGACCGCCACGAAAACAT 695
BSNT_03746___ 669 TGGCTTTGGTGAAATAGGTTTTGACGCACTGCAATATGTTGTTCACCATG 718
.||.||.||.|||||.||||||||.||.||.|||||..|.||||||||.|
BL03699___nfo 696 CGGATTCGGAGAAATCGGTTTTGATGCGCTCCAATACATCGTTCACCACG 745
BSNT_03746___ 719 AGCAGTTAAAAGACATTCCAAAAATTCTTGAAACACCATACGTCGGTGAA 768
|.|||.|.|||||.|||||.|||||.||||||||.||.||.||.||.|||
BL03699___nfo 746 ATCAGCTGAAAGATATTCCGAAAATCCTTGAAACGCCTTATGTAGGAGAA 795
BSNT_03746___ 769 GATAAAAAGAACAAAAAACCGCCATACCGTTTTGAGATTGAAATGCTGAA 818
|||||||||||||||||.|||||.|||||.|||||.|||||||||||.||
BL03699___nfo 796 GATAAAAAGAACAAAAAGCCGCCTTACCGGTTTGAAATTGAAATGCTCAA 845
BSNT_03746___ 819 AGAAAAACAATTTGATGATACA-TTGCTCGAAAAGATTTTACAGCAATAA 867
|.|.|||||.|||||||| |.| .||||.|||||.||....|||||||||
BL03699___nfo 846 AAATAAACAGTTTGATGA-AGAGCTGCTTGAAAAAATCAAGCAGCAATAA 894
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