Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03747 and BL03698
See
Amino acid alignment /
Visit
BSNT_03747 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence dna-align/BSNT_03747___yqfR.1.5803.seq
# -bsequence dna-align/BL03698___yqfR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03747___yqfR-BL03698___yqfR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03747___yqfR-BL03698___yqfR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03747___yqfR
# 2: BL03698___yqfR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1371
# Identity: 997/1371 (72.7%)
# Similarity: 997/1371 (72.7%)
# Gaps: 78/1371 ( 5.7%)
# Score: 3576.0
#
#
#=======================================
BSNT_03747___ 1 ATGTGCCGCTTTAAGGAGCTGGGAAAAATGAAAGAAACGAAATTTGAACT 50
||||||.||||||||||||||.|
BL03698___yqf 1 ---------------------------ATGAAACAAACGAAATTTGAAAT 23
BSNT_03747___ 51 TTATGAATTGAAACCATTTATTATAGATGCAGTACATCGCCTTGGTTTTT 100
.||.||.||.||.||.|||||||||||.||.||.||.|.|.|.||.||||
BL03698___yqf 24 GTACGATTTAAAGCCGTTTATTATAGAGGCTGTTCACCACTTGGGATTTT 73
BSNT_03747___ 101 ACGAACCAACTGATATCCAGAAAAGGCTGATTCCTGCAGTGTTAAAAAAA 150
|.||.||.||||||||.||.||..||.|.||.|||||.|.|.|.|||...
BL03698___yqf 74 ATGAGCCGACTGATATTCAAAAGCGGTTAATCCCTGCGGCGCTGAAAGGG 123
BSNT_03747___ 151 GAAAGCGTCATCGGCCAGTCTCAGACGGGTACTGGAAAGACTCACGCTTA 200
||.||||..|||||.|||||.|||||.|||||.|||||.||.|||||.||
BL03698___yqf 124 GAGAGCGCGATCGGGCAGTCGCAGACAGGTACGGGAAAAACGCACGCCTA 173
BSNT_03747___ 201 TTTACTGCCTTTATTAAACAAAATCGATCCTGCTAAGGATGTCGTTCAGG 250
|.|.||.||..|.||||.||..||||||||||..|||||..|||||||.|
BL03698___yqf 174 TCTGCTCCCGCTTTTAAGCAGGATCGATCCTGAAAAGGAGTTCGTTCAAG 223
BSNT_03747___ 251 TAGTCATTACGGCTCCGACAAGAGAGCTAGCCAACCAGATTTATCAGGAA 300
|.||.|||||||||||||||||.|||||.||||||||||||.||||||||
BL03698___yqf 224 TCGTGATTACGGCTCCGACAAGGGAGCTGGCCAACCAGATTCATCAGGAA 273
BSNT_03747___ 301 GCGCTTAAAATCACGC--------AGGG--TGAGGAAGGCAGTCAGATTC 340
|..||.|||||||| | |||| |||.|||| .|||||
BL03698___yqf 274 GTTCTGAAAATCAC-CAAGTTTTTAGGGCCTGATGAAG------CGATTC 316
BSNT_03747___ 341 GCTCGAAATGTTTTATCGGAGGCACTGATAAACAAAAATCAATTGATAAA 390
|.|||||||||||.|||||.||.||.||||||||||||||.|||||.|||
BL03698___yqf 317 GTTCGAAATGTTTCATCGGCGGTACCGATAAACAAAAATCGATTGACAAA 366
BSNT_03747___ 391 TTGAAAATACAGCCGCATCTGGTTGTCGGTACACCCGGACGGATTGCTGA 440
||.||||..|||||.||||||||.||.|||||.||.||.||.|||||.||
BL03698___yqf 367 TTAAAAACGCAGCCCCATCTGGTGGTAGGTACGCCGGGGCGAATTGCAGA 416
BSNT_03747___ 441 CTTAATCAAAGAACAGGCGTTAAGTGTTCATAAAGCGGAATCTCTTGTTA 490
|.|.||||..||.||||||.|...||||||||||||.|..||..|.||||
BL03698___yqf 417 CCTGATCAGGGAGCAGGCGCTCGATGTTCATAAAGCCGGTTCGTTCGTTA 466
BSNT_03747___ 491 TTGATGAAGCGGATCTAATGCTGGACATGGGATTCCTTGCAGATGTAGAT 540
||||.||.|||||..|||||||.||.||||||||..|.|.||||||.|||
BL03698___yqf 467 TTGACGAGGCGGACTTAATGCTTGATATGGGATTTTTGGAAGATGTCGAT 516
BSNT_03747___ 541 TACATCGGTTCCCGCATGCCTG-AGGATCTGCAAATGCTTGTGTTCTCAG 589
|..|||||.||.|..|||||.| |||.| ||||.||||||||.||.||.|
BL03698___yqf 517 TTTATCGGGTCGCATATGCCGGAAGGCT-TGCAGATGCTTGTATTTTCCG 565
BSNT_03747___ 590 CGACCATACCGGAAAAGCTGAAACCATTTTTGAAGAAATACATGGAAAAT 639
|.||.||.||.|||||..|.||.||.||..||||.||||||||||..|||
BL03698___yqf 566 CAACGATTCCCGAAAAATTAAAGCCTTTCCTGAAAAAATACATGGCCAAT 615
BSNT_03747___ 640 CCGAAATACGCCCATGTGGAGCCAAAACAGGTGACTGCTGCGAAAATCGA 689
||||..||.||.|||||.|||||.||.||..|.||.||||..||||||||
BL03698___yqf 616 CCGAGGTATGCACATGTTGAGCCGAAGCACATCACGGCTGAAAAAATCGA 665
BSNT_03747___ 690 GCATATCCTCATTCCTTCGAAACATCGTGACAAGGACAAGCTCCTTTTTG 739
.||..|.||.||.|||||.|..||..|.||.||..|..||||.||..|.|
BL03698___yqf 666 ACACGTGCTGATACCTTCCAGGCACAGGGATAAAAATGAGCTGCTGCTCG 715
BSNT_03747___ 740 ACATCATGTCGCATCTGAATCCATACTTGGGGATTGTGTTTGCCAACACG 789
|..|||||.|.|||.|.|||||.||.||||.||||||.||.|||||.||.
BL03698___yqf 716 AGGTCATGACCCATTTAAATCCGTATTTGGCGATTGTTTTCGCCAATACA 765
BSNT_03747___ 790 AAAAATACGGCTGACCATATTGCCCAGTATCTGACTGGCAAAGGCATGAA 839
||||..|||||.|||.|.||.|||...||||||||.|.||||||.|||||
BL03698___yqf 766 AAAACAACGGCCGACGAGATCGCCGCTTATCTGACGGACAAAGGGATGAA 815
BSNT_03747___ 840 AATCGG-CTTGCTGCACGGCGGATTAACACCACGTGAGCGGAAAAAAGTC 888
|.|||| ||| ||||||||.||..|.||.||.||.||.||.||||||||.
BL03698___yqf 816 AGTCGGACTT-CTGCACGGGGGGCTTACGCCGCGGGAACGAAAAAAAGTG 864
BSNT_03747___ 889 ATGAAGCAGATCAATGATTTGGAATTCACTTATGTCATTGCAACTGACCT 938
||||||||.|||...|||.||||||||||.|||.||||.||.|||||..|
BL03698___yqf 865 ATGAAGCAAATCGGCGATCTGGAATTCACCTATATCATAGCCACTGATTT 914
BSNT_03747___ 939 TGCCGCAAGAGGTATTGATATTAAAGGTGTCAGCCATGTTATCAACTATG 988
.||.|||||.||.||.|||||||||||.|||||||||||.||.|||||||
BL03698___yqf 915 GGCTGCAAGGGGAATCGATATTAAAGGCGTCAGCCATGTCATTAACTATG 964
BSNT_03747___ 989 AGCTGCCGGATGATCTCGATTTCTATGTTCACCGTGTGGGCAGAACGGCT 1038
|.|||||.||||||||.||.||.||.||||||||.||.|||.|.||.||.
BL03698___yqf 965 AACTGCCTGATGATCTTGACTTTTACGTTCACCGCGTCGGCCGTACAGCG 1014
BSNT_03747___ 1039 CGTGCCGGCTCATCAGGACAAGCGATGACCATTTATGAGCTTA---CTGA 1085
||.|||||..||||.|||..||||.||||..||||||| || ||||
BL03698___yqf 1015 CGCGCCGGAACATCCGGAACAGCGGTGACGTTTTATGA---TACATCTGA 1061
BSNT_03747___ 1086 TGAGGATGCATTAGT-AAGACTTGAAAAAATGGGCATCGAATTTGATTAC 1134
|||.||||||.|.|| ||| ||||||.|.|||||.||||..|||||..||
BL03698___yqf 1062 TGAAGATGCACTTGTGAAG-CTTGAACAGATGGGGATCGTGTTTGAAAAC 1110
BSNT_03747___ 1135 TTAGA-GCTTGAAAAGGGCGAATGGAAAAAAGGCGATGACCGTCAGCGCC 1183
.| || |.|||||||.|||||.||||||||...|||||||||..||||||
BL03698___yqf 1111 AT-GAGGATTGAAAAAGGCGAGTGGAAAAAGATCGATGACCGCAAGCGCC 1159
BSNT_03747___ 1184 GCAAAAAGCGTAAAAAAACGCCGAATGAAGCGGATGAAATTGCTCATCGT 1233
|..|.||.||.||||.||||||..|||||.|||||||..|.||..|.||.
BL03698___yqf 1160 GTCAGAACCGAAAAAGAACGCCTGATGAAACGGATGAGGTCGCCAAGCGG 1209
BSNT_03747___ 1234 CTCGTGAAAAAGCCGAAGAAGGTTAAGCCTGGGTATAAAAAGAAAATGAG 1283
||.||||||||.||||..||.||.||||||||.|||||.|||||||||
BL03698___yqf 1210 CTTGTGAAAAAACCGAGAAAAGTCAAGCCTGGATATAAGAAGAAAATG-- 1257
BSNT_03747___ 1284 CTATGAGATGGAGAAAATC-----AAGAAAAA-ACAG---AGAAGAAACC 1324
.|||.|| ||||| ||.||||| |||| |.||||||.|
BL03698___yqf 1258 ----CAGACGG---AAATCCAAAAAATAAAAAGACAGCAAAAAAGAAAGC 1300
BSNT_03747___ 1325 AATCTAAGAAAA-GAAAGTAG 1344
||| |.|||||| ||||||||
BL03698___yqf 1301 AAT-TTAGAAAAGGAAAGTAG 1320
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.