Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05524 and BL03684
See
Amino acid alignment /
Visit
BSNT_05524 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence dna-align/BSNT_05524___ywqH.1.5803.seq
# -bsequence dna-align/BL03684.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05524___ywqH-BL03684.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05524___ywqH-BL03684.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05524___ywqH
# 2: BL03684
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 502
# Identity: 261/502 (52.0%)
# Similarity: 261/502 (52.0%)
# Gaps: 146/502 (29.1%)
# Score: 535.5
#
#
#=======================================
BSNT_05524___ 1 ATGGGTTATGAAAGT-ATGCTAGC--------GGATATCAAAAGTTCGCT 41
||| ||| ||||.||| ..|||||.|.||..||.|
BL03684 1 -------ATG--AGTCATGCGAGCACATTGAATCATATCCACAGCACGAT 41
BSNT_05524___ 42 CAACGGAAAAATTTCCGACGT-GGAAGACAAGATCGAA-AAGCTGAAAAA 89
.|||..|||..|..||||.|| |.|||.| .|||.||| .|| |.||||.
BL03684 42 TAACCAAAAGCTGGCCGATGTAGAAAGGC-GGATTGAACGAG-TTAAAAC 89
BSNT_05524___ 90 AGCAAAAAAGGACATAGACACACTGCAAGAAGAGGCAATC---ACT---G 133
|||||||||||..||.|| |.|||||.|.|.||.| |.| |
BL03684 90 AGCAAAAAAGGGGATTGA------GAAAGAACACGAAACCGGGATTGTCG 133
BSNT_05524___ 134 AAATCAAAGAAATTGTGAAACCGGAATTGGGCAAGCATTGGAC-GGGAAC 182
|.||||...||||..||.|.||..|..||..||..||.||||| |||.||
BL03684 134 AGATCAGGCAAATCTTGCACCCTCATCTGAACAGCCACTGGACAGGGGAC 183
BSNT_05524___ 183 AAAAGCCGATGATTTCGACAAGG-GAA-GAGAAGAGGCGAAATCGGAAGC 230
...|||.|.|||||.| |.|| ||| |.||.||||| || |..|
BL03684 184 -TTCGCCAACGATTTTG--ATGGCGAACGGGATGAGGC----TC--ATAC 224
BSNT_05524___ 231 ATC------CAAGATTGTGAATGATAAATATAACGAGTATATGGCTTCGA 274
||| |||.||.|||||.|..||.||..|.|..|||||
BL03684 225 ATCTATGTACAACATCGTGAACGGAAAGTACGAAGGCTATAT-------- 266
BSNT_05524___ 275 TTCAAAGCAAAATATTCTGGCTTGAGACAGAGAAA----TTTGAGCT-GA 319
|||..|| |||| ||||||| ||||.||| ||
BL03684 267 TTCCCAG---------CTGG--------AGAGAAAAATTTTTGCGCTCGA 299
BSNT_05524___ 320 ATTTGACAAAAAGTGCAGC---GAAT--------GCCGCAGGCGACCTTC 358
|.||| |||||..|||| |||| ||.|||
BL03684 300 AGTTG---AAAAGCACAGCCTTGAATTGGCGGGAGCGGCA---------- 336
BSNT_05524___ 359 TTGCTAAAGGAGAAGA--------TTTC----GTAGAAGAAGCAGGAAGA 396
|||||||..|..|| |||| |..|||.|||| ||..||
BL03684 337 --GCTAAAGAGGCGGATCATTTGCTTTCTCTGGGGGAAAAAGC-GGTTGA 383
BSNT_05524___ 397 -CAAATTAG---TAAA-----------CTAAAA----TGGTGGTGA---- 423
||..|.|| |||| |.|||| |||.|.||.
BL03684 384 TCAGTTGAGCGATAAAATCCGCTCAATCAAAAACAGTTGGAGCTGGTTTT 433
BSNT_05524___ 423 -- 423
BL03684 434 AA 435
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.