Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03765 and BL03678
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03765___yqzB.1.5803.seq
# -bsequence dna-align/BL03678___ccpN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03765___yqzB-BL03678___ccpN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03765___yqzB-BL03678___ccpN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03765___yqzB
# 2: BL03678___ccpN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 695
# Identity: 510/695 (73.4%)
# Similarity: 510/695 (73.4%)
# Gaps: 58/695 ( 8.3%)
# Score: 2021.0
#
#
#=======================================
BSNT_03765___ 0 -------------------------------------------------- 0
BL03678___ccp 1 ATGTTATCGACTTTTATACATAACGAACGAATTGTGAGCTTCGGCTTAAA 50
BSNT_03765___ 1 ----GTGAGTACGATCGAACTAAATAAACGGCAAGAACATATTTTGCAGA 46
||||||||||||||||||||||||||.||.||.|||||||||||||
BL03678___ccp 51 GGTGGTGAGTACGATCGAACTAAATAAACGTCAGGAGCATATTTTGCAGA 100
BSNT_03765___ 47 TTGTAAAAGAAAACGGGCCGATTACAGGGGAGCATATTGCAGAAAAGCTG 96
||||.|||||.||||||||||||||.||.||.|||||.||.|||||||||
BL03678___ccp 101 TTGTCAAAGAGAACGGGCCGATTACCGGAGAACATATCGCGGAAAAGCTG 150
BSNT_03765___ 97 AACCTAACCAGGGCGACATTGCGCCCGGATTTAGCCATACTCACCATGTC 146
||.||.||.|||||.||..|.||.||||||||.||.|||.|.||.|||||
BL03678___ccp 151 AATCTGACGAGGGCTACCCTTCGTCCGGATTTGGCAATATTGACGATGTC 200
BSNT_03765___ 147 AGGATTCCTCGAGGCGCGCCCGAGAGTCGGTTATTTCTATACGGGAAAAA 196
.|||||..|.||.||..|.|||.|.||||||||||||||.||||||||.|
BL03678___ccp 201 GGGATTTTTGGAAGCAAGGCCGCGGGTCGGTTATTTCTACACGGGAAAGA 250
BSNT_03765___ 197 CCGGCACACAGCTTTTGGCAGATAAACTCAAAAAGCTTCAGGTGAAAGAC 246
|.|||||.|||||.|||||.|||||.||.|||||.||.||||||||||||
BL03678___ccp 251 CGGGCACGCAGCTCTTGGCTGATAAGCTGAAAAAACTGCAGGTGAAAGAC 300
BSNT_03765___ 247 TTTCAATCTATCCCCGTAGTGATTCACGAAAACGTTTCTGTGTACGATGC 296
||.||.||.||.||.||.||.|||||.|||||.||.||.||.||.|||||
BL03678___ccp 301 TTCCAGTCCATTCCGGTGGTCATTCATGAAAATGTCTCCGTTTATGATGC 350
BSNT_03765___ 297 GATTTGCACCATGTTTTTAGAAGATGTAGGTACTCTGTTTGTGGTGGACC 346
|||||||||.|||||||||||.||.|||||.||.||.|||||.||.||..
BL03678___ccp 351 GATTTGCACGATGTTTTTAGAGGACGTAGGAACGCTTTTTGTCGTTGATG 400
BSNT_03765___ 347 GCGATGCTGTTTTAGTCGGGGTGCTTTCACGAAAAGACTTGCTCAGAGCG 396
...||||..|.||||||||.||.||||||||||||||||||||||||||.
BL03678___ccp 401 ATAATGCCATCTTAGTCGGTGTACTTTCACGAAAAGACTTGCTCAGAGCC 450
BSNT_03765___ 397 AGCATTGGCCAGCAGGAGCTTACATCGGTCCCTGTTCACATCATCATGAC 446
|||||.|||.|.||||||||..|.||..|.||.||.||.|||||.|||||
BL03678___ccp 451 AGCATCGGCAAACAGGAGCTCCCTTCAATACCCGTCCATATCATTATGAC 500
BSNT_03765___ 447 AAGGATGCCGAACATTACGGTGTGCAGACGCGAGGATT--ATGTGATGGA 494
.||.|||||||||||||||.|.|||||.|||||.|||| ||.| ||||
BL03678___ccp 501 GAGAATGCCGAACATTACGCTTTGCAGGCGCGACGATTTCATTT--TGGA 548
BSNT_03765___ 495 CATTGCAAAGCACTTAATAGAAAAACAAATTGATGCACTGCCTGTCATCA 544
||||||.|||....|.||.||||||||||||||.|||||||||||..|.|
BL03678___ccp 549 CATTGCCAAGATGCTCATCGAAAAACAAATTGACGCACTGCCTGTTGTAA 598
BSNT_03765___ 545 AAGACACCGATAAAGGCTTTGAAGTGATCGGCAGAGTGACAAAAACAAAT 594
||||.||.||.|||||||.||||||..|.||.|||.|.||.|||||.||.
BL03678___ccp 599 AAGATACAGAAAAAGGCTATGAAGTTGTGGGAAGAATTACGAAAACGAAC 648
BSNT_03765___ 595 ATGACAAAAATACTTGTCAGTTTATCTGAAAATGAAATCTTATAA 639
|||||||||||..|.|||.|.||||||||||||||||||.|.||.
BL03678___ccp 649 ATGACAAAAATTTTAGTCGGCTTATCTGAAAATGAAATCATGTAG 693
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