Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03765 and BL03678

See Amino acid alignment / Visit BSNT_03765 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence dna-align/BSNT_03765___yqzB.1.5803.seq
#    -bsequence dna-align/BL03678___ccpN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03765___yqzB-BL03678___ccpN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03765___yqzB-BL03678___ccpN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03765___yqzB
# 2: BL03678___ccpN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 695
# Identity:     510/695 (73.4%)
# Similarity:   510/695 (73.4%)
# Gaps:          58/695 ( 8.3%)
# Score: 2021.0
# 
#
#=======================================

BSNT_03765___      0 --------------------------------------------------      0
                                                                       
BL03678___ccp      1 ATGTTATCGACTTTTATACATAACGAACGAATTGTGAGCTTCGGCTTAAA     50

BSNT_03765___      1 ----GTGAGTACGATCGAACTAAATAAACGGCAAGAACATATTTTGCAGA     46
                         ||||||||||||||||||||||||||.||.||.|||||||||||||
BL03678___ccp     51 GGTGGTGAGTACGATCGAACTAAATAAACGTCAGGAGCATATTTTGCAGA    100

BSNT_03765___     47 TTGTAAAAGAAAACGGGCCGATTACAGGGGAGCATATTGCAGAAAAGCTG     96
                     ||||.|||||.||||||||||||||.||.||.|||||.||.|||||||||
BL03678___ccp    101 TTGTCAAAGAGAACGGGCCGATTACCGGAGAACATATCGCGGAAAAGCTG    150

BSNT_03765___     97 AACCTAACCAGGGCGACATTGCGCCCGGATTTAGCCATACTCACCATGTC    146
                     ||.||.||.|||||.||..|.||.||||||||.||.|||.|.||.|||||
BL03678___ccp    151 AATCTGACGAGGGCTACCCTTCGTCCGGATTTGGCAATATTGACGATGTC    200

BSNT_03765___    147 AGGATTCCTCGAGGCGCGCCCGAGAGTCGGTTATTTCTATACGGGAAAAA    196
                     .|||||..|.||.||..|.|||.|.||||||||||||||.||||||||.|
BL03678___ccp    201 GGGATTTTTGGAAGCAAGGCCGCGGGTCGGTTATTTCTACACGGGAAAGA    250

BSNT_03765___    197 CCGGCACACAGCTTTTGGCAGATAAACTCAAAAAGCTTCAGGTGAAAGAC    246
                     |.|||||.|||||.|||||.|||||.||.|||||.||.||||||||||||
BL03678___ccp    251 CGGGCACGCAGCTCTTGGCTGATAAGCTGAAAAAACTGCAGGTGAAAGAC    300

BSNT_03765___    247 TTTCAATCTATCCCCGTAGTGATTCACGAAAACGTTTCTGTGTACGATGC    296
                     ||.||.||.||.||.||.||.|||||.|||||.||.||.||.||.|||||
BL03678___ccp    301 TTCCAGTCCATTCCGGTGGTCATTCATGAAAATGTCTCCGTTTATGATGC    350

BSNT_03765___    297 GATTTGCACCATGTTTTTAGAAGATGTAGGTACTCTGTTTGTGGTGGACC    346
                     |||||||||.|||||||||||.||.|||||.||.||.|||||.||.||..
BL03678___ccp    351 GATTTGCACGATGTTTTTAGAGGACGTAGGAACGCTTTTTGTCGTTGATG    400

BSNT_03765___    347 GCGATGCTGTTTTAGTCGGGGTGCTTTCACGAAAAGACTTGCTCAGAGCG    396
                     ...||||..|.||||||||.||.||||||||||||||||||||||||||.
BL03678___ccp    401 ATAATGCCATCTTAGTCGGTGTACTTTCACGAAAAGACTTGCTCAGAGCC    450

BSNT_03765___    397 AGCATTGGCCAGCAGGAGCTTACATCGGTCCCTGTTCACATCATCATGAC    446
                     |||||.|||.|.||||||||..|.||..|.||.||.||.|||||.|||||
BL03678___ccp    451 AGCATCGGCAAACAGGAGCTCCCTTCAATACCCGTCCATATCATTATGAC    500

BSNT_03765___    447 AAGGATGCCGAACATTACGGTGTGCAGACGCGAGGATT--ATGTGATGGA    494
                     .||.|||||||||||||||.|.|||||.|||||.||||  ||.|  ||||
BL03678___ccp    501 GAGAATGCCGAACATTACGCTTTGCAGGCGCGACGATTTCATTT--TGGA    548

BSNT_03765___    495 CATTGCAAAGCACTTAATAGAAAAACAAATTGATGCACTGCCTGTCATCA    544
                     ||||||.|||....|.||.||||||||||||||.|||||||||||..|.|
BL03678___ccp    549 CATTGCCAAGATGCTCATCGAAAAACAAATTGACGCACTGCCTGTTGTAA    598

BSNT_03765___    545 AAGACACCGATAAAGGCTTTGAAGTGATCGGCAGAGTGACAAAAACAAAT    594
                     ||||.||.||.|||||||.||||||..|.||.|||.|.||.|||||.||.
BL03678___ccp    599 AAGATACAGAAAAAGGCTATGAAGTTGTGGGAAGAATTACGAAAACGAAC    648

BSNT_03765___    595 ATGACAAAAATACTTGTCAGTTTATCTGAAAATGAAATCTTATAA    639
                     |||||||||||..|.|||.|.||||||||||||||||||.|.||.
BL03678___ccp    649 ATGACAAAAATTTTAGTCGGCTTATCTGAAAATGAAATCATGTAG    693


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