Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03767 and BL03677
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03767___glyS.1.5803.seq
# -bsequence dna-align/BL03677___glyS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03767___glyS-BL03677___glyS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03767___glyS-BL03677___glyS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03767___glyS
# 2: BL03677___glyS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2116
# Identity: 1491/2116 (70.5%)
# Similarity: 1491/2116 (70.5%)
# Gaps: 152/2116 ( 7.2%)
# Score: 5002.5
#
#
#=======================================
BSNT_03767___ 1 ATGAGTAAACAGGATTTACTTTTAGAGATCGGATTAGAGGAAATGCCGGC 50
||||||||.||.|||||.||||||||.|||||||||||.|||||||||||
BL03677___gly 1 ATGAGTAATCAAGATTTGCTTTTAGAAATCGGATTAGAAGAAATGCCGGC 50
BSNT_03767___ 51 GCGCTTTTTGAATGAAAGCATGGTTCAGCTTGGCGACAAGCTGACAGGCT 100
||||||..||.||||.||||||..||||||.||.||.||||||..|.|||
BL03677___gly 51 GCGCTTCATGCATGACAGCATGACTCAGCTGGGTGAGAAGCTGGAAAGCT 100
BSNT_03767___ 101 GGCTTAAAGAAAAAAATATTACTCACGGTGAAGTGAAACTCTTCAATACA 150
||||.||.||||||||||||.|...||||...||.||.||.|..||..|.
BL03677___gly 101 GGCTCAAGGAAAAAAATATTGCCTTCGGTTCCGTCAAGCTGTATAACTCC 150
BSNT_03767___ 151 CCGAGACGTCTTGCTGTGTTCGTTAAGGGTGTCGCAGAAAAGCAGGATGA 200
||.|||.|.||.||.||..|.||..||...||.||.||.|||||||||||
BL03677___gly 151 CCTAGAAGACTGGCCGTTCTTGTCGAGAACGTGGCGGAGAAGCAGGATGA 200
BSNT_03767___ 201 TATAAAAGAAGAAGCAAAAGGACCTGCGAAAAAAATTGCCCTTGATGCGG 250
|.|.|||||||||||.||||||||.||.||.|||||.||||||||.|...
BL03677___gly 201 TGTGAAAGAAGAAGCGAAAGGACCGGCAAAGAAAATCGCCCTTGACGAAA 250
BSNT_03767___ 251 ACGG-GAACTGGACAAAAGCGGCAATCGGCTTTTCAAAAGGCCAAGGCGC 299
|||| ||| ||||||||.|||||.||||||||||||...||.|||||.||
BL03677___gly 251 ACGGCGAA-TGGACAAAGGCGGCCATCGGCTTTTCACGGGGGCAAGGAGC 299
BSNT_03767___ 300 GAATGTGGAAGACCTGTACATCAAAGAAGTAAAAGGCATAGAGTATGTAT 349
.|.|..||||||..||||..|.|||||..|.|||||.|..||.|||||||
BL03677___gly 300 AAGTCCGGAAGATTTGTATTTTAAAGACATCAAAGGAACGGAATATGTAT 349
BSNT_03767___ 350 TCGTGCAAAAATTCCAAGCCGGCCAAGAAACGAAGTCGCTTCTGCCAGAA 399
|.|||||||||||||||...|||||.||.|||...||..|.||.||.||.
BL03677___gly 350 TTGTGCAAAAATTCCAAAAAGGCCAGGATACGTTTTCATTGCTTCCTGAG 399
BSNT_03767___ 400 TTGAGCGGTTTAATTACAAGCTTGCATTTCCCGAAAAACATGCGCTGGGG 449
.|..|||.|||..|.||||||.|.||.||.||||||||||||||||||||
BL03677___gly 400 CTCCGCGATTTGGTGACAAGCCTCCACTTTCCGAAAAACATGCGCTGGGG 449
BSNT_03767___ 450 AAATGAAGATTTGCGTTATATCCGACCGATCAAATGGATTGTCGCATTAT 499
.|..||||||||....||||||.|.|||||.||||||||.|||||..|.|
BL03677___gly 450 CAGCGAAGATTTAAAATATATCAGGCCGATTAAATGGATCGTCGCGCTGT 499
BSNT_03767___ 500 TTGGACAG-GATGTCATTCCATTTTCGATCACAAACGTTGAGTCTGGACG 548
|.||| || ||.|||.||||.|||||..||.|..|.||.||..|.|||||
BL03677___gly 500 TCGGA-AGTGAAGTCGTTCCGTTTTCAGTCGCTCATGTCGAAACCGGACG 548
BSNT_03767___ 549 GACAACACAGGGACATCGTTTCCTCGGACATGAAGTGTC--AATTGA-AT 595
.|||||.||||||||.||.|||||||||.|.|.|| | |.|||| ..
BL03677___gly 549 CACAACGCAGGGACACCGCTTCCTCGGAAAAGCAG---CCGACTTGAGCG 595
BSNT_03767___ 596 CACCTTCAGCTTATGAAGAG-CAGCT-GAAAGAACAGCATGTTATTGCTG 643
|||||||.|..||.||||.| || || ||||| .|||..|||.|||||.|
BL03677___gly 596 CACCTTCTGAATACGAAGCGACA-CTGGAAAG-CCAGTTTGTGATTGCCG 643
BSNT_03767___ 644 ATCCTAGCGTC----CGAAAGCAAATGAT--TCAATCTCAGCTGGAAGCA 687
||| ||.| ||.|||||..|||| |.|| .|||||.||.|.|
BL03677___gly 644 ATC----CGGCCAAACGGAAGCAGCTGATCGTTAA--GCAGCTTGACGAA 687
BSNT_03767___ 688 ATGGCTGCTGAAAACAATTGGAGCATTCC-AGTTGACGAAGACCTTCTTG 736
.||||||||||.||....|||..|||||| || .|||||.||.||.||.|
BL03677___gly 688 CTGGCTGCTGAGAAGTCCTGGGACATTCCGAG-AGACGAGGATCTGCTGG 736
BSNT_03767___ 737 ATGAAGTGAATCATTTAGTAGAATACCCGACAGCTCTTTACGGTTCATTT 786
||||.||.||.|||.|.||.|||||.||.||.|..||.|.||||||.|..
BL03677___gly 737 ATGAGGTCAACCATCTGGTTGAATATCCAACGGTACTGTTCGGTTCTTAC 786
BSNT_03767___ 787 GAATCGGAGTTTCTGTCAATTCCTGAAGAAGTGCTTGTCACGACAATGAA 836
|||..|||.|||||..|||||||||||||.|||||.||.||.||||||||
BL03677___gly 787 GAAGAGGAATTTCTCGCAATTCCTGAAGAGGTGCTCGTGACAACAATGAA 836
BSNT_03767___ 837 AGAGCATCAGCGCTACTTCCCTGTCAAAGACAAAAACGGTGACCTGCTGC 886
||||||||||||.||.||||||||||||||..|||||||...|.||||.|
BL03677___gly 837 AGAGCATCAGCGTTATTTCCCTGTCAAAGATGAAAACGGCAGCTTGCTTC 886
BSNT_03767___ 887 CTCACTTTATCACAGTCCGAAACGGCAACAGCCACGCGATTGAAAATGTG 936
||.|||||.|.||.|||||.|||||..||||||.|||..|||||||.|||
BL03677___gly 887 CTTACTTTGTGACCGTCCGCAACGGAGACAGCCGCGCCCTTGAAAACGTG 936
BSNT_03767___ 937 GCCCGAGGCAATGAAAAAGTGCTGCGCGCACGTTTATCTGATGCTTCATT 986
||..||||.|||||||||||||||.|.|||.|..|.||.||.|||||.||
BL03677___gly 937 GCGAGAGGGAATGAAAAAGTGCTGAGAGCAAGGCTTTCAGACGCTTCCTT 986
BSNT_03767___ 987 CTTCTACAAGGAAGATCAGAAACTAAACATTGATGCAAATGTGAAGAAGC 1036
||||||.||.||||||||.|||.||||||||||.|..|||||||..||||
BL03677___gly 987 CTTCTATAAAGAAGATCAAAAATTAAACATTGACGAGAATGTGAGAAAGC 1036
BSNT_03767___ 1037 TTGAAAATATCGTTTTCCATGAAGAGCTTGGTTCTCTTGCTGATAAGGTT 1086
|.|||||.|||||||||||||||||.||.||.||.||.|..|||||.||.
BL03677___gly 1037 TCGAAAAGATCGTTTTCCATGAAGAACTGGGGTCGCTCGGAGATAAAGTG 1086
BSNT_03767___ 1087 AGAAGAGTCACATCAATCGCA--GAGAAACTTGCCGTTC----------- 1123
||| |||| |||...|||||.|..|
BL03677___gly 1087 AGA--------------CGCACTGAGGCGCTTGCTGAACGGATCGCTGAA 1122
BSNT_03767___ 1124 GTCTTCAG-GCTGATGAAGATACATTAAAACATG-TGAAGCGGGCTGCTG 1171
|||.||.| ||.|||.||||.||..|..|.| || |.|||||.|||||..
BL03677___gly 1123 GTCATCGGTGCCGATCAAGAGACGGTGCAGC-TGATCAAGCGCGCTGCGC 1171
BSNT_03767___ 1172 AAATTTCTAAATTCGACCTTGTGACGCATATGATATATGAATTCCCTGAA 1221
|.|||||.|||||||||||||||||.||.|||.|.||.|||||.|||||.
BL03677___gly 1172 ACATTTCAAAATTCGACCTTGTGACACACATGGTTTACGAATTTCCTGAG 1221
BSNT_03767___ 1222 CTTCAAGGAATTATGGGCGAAAAGTATGCGAGAATGCTTGGCGAAGATGA 1271
||.||.||.||.|||||.|||||.||||||.|.|||||.||.||..|.||
BL03677___gly 1222 CTGCAGGGCATCATGGGTGAAAAATATGCGCGGATGCTCGGTGAGAAAGA 1271
BSNT_03767___ 1272 AGCTGTGGCTGCG---GCAGTTAATGAACATTATATGCCTAGATCAGCGG 1318
||..|| |||| |||||.|||||.||.||||||||.|||..|||.|
BL03677___gly 1272 AGAAGT---TGCGCTCGCAGTCAATGAGCACTATATGCCGAGACAAGCCG 1318
BSNT_03767___ 1319 GCGGAGAAACGCCTTCTACTTTCACCGGAGCTGTTGTAGCAATGGCGGAT 1368
|.|||.||||||||||..|..||.||||.||.||.||.|||.|||||||.
BL03677___gly 1319 GAGGACAAACGCCTTCATCAATCGCCGGCGCCGTCGTCGCATTGGCGGAC 1368
BSNT_03767___ 1369 AAGCTTGACACAATCGCTTCATTCTTCTCTATCGGCGTAATTCCGACCGG 1418
||.||.||.||..||||||||||||||...||||||||.||||||||.||
BL03677___gly 1369 AAACTCGATACGGTCGCTTCATTCTTCAAAATCGGCGTCATTCCGACAGG 1418
BSNT_03767___ 1419 TTCCCAGGACCCTTACGGACTGCGCCGCCAAGCAAGCGGTATTGTTGCGA 1468
.||.|||||.||.||.||||||.|..|.||.||.|||||.||.||....|
BL03677___gly 1419 ATCTCAGGATCCGTATGGACTGAGAAGACAGGCGAGCGGCATCGTCCAAA 1468
BSNT_03767___ 1469 TTCTTCTTGACCGCAACTGGGGAATTTCATTTGAAGAGCTGCTTACTTT- 1517
|.||.||||||||.||||||||.||||||||..||||.|||..|.|.||
BL03677___gly 1469 TCCTGCTTGACCGGAACTGGGGCATTTCATTCAAAGAACTGGCTGCGTTT 1518
BSNT_03767___ 1518 --CGTACA--AACCGATAAAGAAATTGAACTGCTGGATTTCTTCACTCAG 1563
||.||| ||.| |.|.|..||||||||.||.|||||.|..|||
BL03677___gly 1519 GCCGGACAGGAAGC-----AAACAGCGAACTGCTCGAATTCTTTAAACAG 1563
BSNT_03767___ 1564 CGCTTGAAATATGTCTTGAATGCTGAACAAATCAGACATGATGTCATTGA 1613
|||.|.||||||||.||.|..||.|||.|.|||.||.|.||.|||.|.||
BL03677___gly 1564 CGCCTCAAATATGTATTAACAGCGGAAAACATCCGATACGACGTCGTGGA 1613
BSNT_03767___ 1614 CGCCGTGCTGGAAAGCTCTGAGCTTGAGCCGTACTCTGCGCTGCATAAAG 1663
.||||||||.||||||.|..|.|||||||||||.||.||..|..|.||||
BL03677___gly 1614 TGCCGTGCTCGAAAGCACGAACCTTGAGCCGTATTCGGCTGTCAAAAAAG 1663
BSNT_03767___ 1664 CACAAGT----------ACTGGAGCAAAAGCTTGGTGCACCTGGCTTTAA 1703
|....|| .|||.|||.|| |||.|..|||||
BL03677___gly 1664 CCGCCGTCCTTGAATCGGCTGCAGCCAA----------ACCGGAATTTAA 1703
BSNT_03767___ 1704 GGAAACAGCCGAAGCGTTAGGC-CGAGTGATCTCTATCAGCAAA------ 1746
.|||||.||.||||||.| ||| .|.||.||.||.|||||||||
BL03677___gly 1704 AGAAACGGCTGAAGCGCT-GGCAAGGGTTATTTCGATCAGCAAAAAGAGC 1752
BSNT_03767___ 1747 -AAAGGAGTCCGCGGAGACATTCA-GCCTGATCTGTTTGAAAA---TGAA 1791
|||.||| ||| ||||.| ||.|.| ||||||||||| |.||
BL03677___gly 1753 GAAACGAG--CGC-----CATTGACGCTTCA-CTGTTTGAAAACCCTCAA 1794
BSNT_03767___ 1792 TACGAAG-------CAAAACTGTTTGATGCCTACCAAACAGCGAAGCAAA 1834
.|.||.| ||||.|| |.|||.||.| .||| |.||||||
BL03677___gly 1795 GAAGAGGAGCTTTTCAAAGCT-TATGAGGCGT-----GCAG-GCAGCAAA 1837
BSNT_03767___ 1835 ATCTGCAGGAAAACTTCAGCAA--AAAAGATTATGAGGCGGCGCTTGCTT 1882
.||..|..|||.|.||| ||||||||||||| ||||| |||
BL03677___gly 1838 -----TAGAGACCCTTTACCAAGCAAAAGATTATGAG--GGCGC---CTT 1877
BSNT_03767___ 1883 CACT----TG---CAGCCTTAAAAGAACCGATCGATGCTTACTTCGATCA 1925
||.| || .||| |.|||||.|||||.||.||.||.||.|||||
BL03677___gly 1878 CAGTGAGCTGTCCAAGC--TGAAAGAGCCGATTGAAGCGTATTTTGATCA 1925
BSNT_03767___ 1926 TACAATGGTTATA-GCGGATAATGAGTCATTAAAGGCAAATCGTTTAGCG 1974
|||.|||| ||.| ||.||..||||...||||||.|||||.||..|.|||
BL03677___gly 1926 TACGATGG-TACATGCCGAAGATGAAAGATTAAAAGCAAACCGCCTGGCG 1974
BSNT_03767___ 1975 CAAATGGTAAGCTTGGCGGATGAGATCAAGTCCTTTGCGAATATGAATGC 2024
|||||||.||||||||||||...||||...||.|||||.||.||.|||||
BL03677___gly 1975 CAAATGGCAAGCTTGGCGGAGCTGATCCGATCTTTTGCAAACATCAATGC 2024
BSNT_03767___ 2025 CCTTATTGTAAAATAA 2040
|.|.||||||||||||
BL03677___gly 2025 CATCATTGTAAAATAA 2040
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