Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03769 and BL03675
See
Amino acid alignment /
Visit
BSNT_03769 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03769___recO.1.5803.seq
# -bsequence dna-align/BL03675___recO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03769___recO-BL03675___recO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03769___recO-BL03675___recO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03769___recO
# 2: BL03675___recO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 800
# Identity: 575/800 (71.9%)
# Similarity: 575/800 (71.9%)
# Gaps: 61/800 ( 7.6%)
# Score: 2036.5
#
#
#=======================================
BSNT_03769___ 1 ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGA 50
||||||||.|||||||||||.|||||.|||||.|||||.||.||.||.||
BL03675___rec 1 ATGCTGACGAAATGTGAAGGTATCGTCCTTCGTACAAACGACTATGGTGA 50
BSNT_03769___ 51 GACGAATAAAATCGTAACTTTACTGACAAGAGAACACGGAAAAATAGGTG 100
.||.|||||.|||.|.||..||.||||.|||||||||||.|||||.||||
BL03675___rec 51 AACAAATAAGATCATTACGCTATTGACGAGAGAACACGGGAAAATCGGTG 100
BSNT_03769___ 101 TTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGC 150
|..|||||.|.|||||||||||.|||||||||||.||.|||||..|...|
BL03675___rec 101 TGCTGGCAAGGGGCGCCAAAAAGCCGAACAGCCGCTTGTCAGCGATTTCC 150
BSNT_03769___ 151 CAGCCCTTTTTGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGG 200
|||||.||..|.||||..|||||.|||.|.|..|||.||||.||||||||
BL03675___rec 151 CAGCCGTTCCTTTATGCATCTTTTTTATTCCGCAAATCATCCGGCCTCGG 200
BSNT_03769___ 201 AACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGCATCAGGGAAG 250
.||..|..|||||||.||.||||||...||||||||....|||.|.||.|
BL03675___rec 201 CACATTGGAGCAGGGCGAGATGATCGAAAGCATGAGGAATATCCGCGAGG 250
BSNT_03769___ 251 ACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGA 300
|..|||||||||||||.||.||.|||||.||.|||||.|||.||||||..
BL03675___rec 251 ATCTGTTTTTAACAGCTTACGCGGCCTACATCGCTGAATTAATCGACAAG 300
BSNT_03769___ 301 GGCACAGAAGAAAAAAAGCCAAATCCTTATTTATTTGA-----------A 339
||.||.||.|||||.||.||.|||||.|.||||||||| |
BL03675___rec 301 GGAACGGAGGAAAAGAAACCGAATCCGTTTTTATTTGAGCTGCTGCTTCA 350
BSNT_03769___ 340 TTCATATTAGAATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGT 389
.||| ||.||.| .|||||||||.||.||||||||.||..|
BL03675___rec 351 GTCA-ATGAGGA----------GGCTGAATGACGGTACAGATCCCGACAT 389
BSNT_03769___ 390 TATC----ACCTTCATTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTG 435
|||| ||| ||||.| ||.|.||.||||||.|.||.|||||.|||
BL03675___rec 390 TATCGCCAACC-TCATCG---AAGTCAAAATGCTCAGCGTGATGGGGCTG 435
BSNT_03769___ 436 TATCCTGAGCTGAATCATTGTGTACATTGTAAGAGCCAAGACGGAACCTT 485
|||||.||||||.||.|.|||||.||.||.||.|||.|||||||.||.||
BL03675___rec 436 TATCCGGAGCTGGATGAATGTGTGCACTGCAAAAGCAAAGACGGCACATT 485
BSNT_03769___ 486 TCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAA 535
||||||.||..|.||.||.||.||.|||||.||||||||||||||||..|
BL03675___rec 486 TCATTTTTCGATCCGCGACAACGGCTTTATCTGCCACCGCTGTTTTGCGA 535
BSNT_03769___ 536 AAGATCCTTACAGGATACCG----CTCAAACCGCAAACGGCAAGGCTGTT 581
|||||||.|||||||||||| ||| |||| |.|.||.||||||||
BL03675___rec 536 AAGATCCATACAGGATACCGCTGTCTC---CCGC-ATCCGCCAGGCTGTT 581
BSNT_03769___ 582 AAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAA 631
.|||||.||||..||||||||.|||||.||||||||.|||||.||..|.|
BL03675___rec 582 GAGACTGTTTTTTTATTTTGACCTGTCAAGGCTCGGAAATGTCTCGGTCA 631
BSNT_03769___ 632 AAGAGGAAACAAA-----AGCTGAATTAAAGCAAGTGATTGATTTA---- 672
||.||||.||.|| ||||||| |||.| |.|||.|
BL03675___rec 632 AACAGGAGACGAAGGATGAGCTGAA-------AAGGG--TTATTCAGACG 672
BSNT_03769___ 673 TATTACGAAGAATATTC-GGGATTGTATTTAAAATCAAAGCGCTTTTTAG 721
||.||.||.||.||.|| |||| |.||..|.|||||...||||||..|.|
BL03675___rec 673 TACTATGACGAGTACTCAGGGA-TCTACCTGAAATCGCGGCGCTTCATGG 721
BSNT_03769___ 722 ATCAAATGGAAAGCATGAAACATCTTATGGG---TGAAAACAAAAGTTGA 768
|.||||||||.|..||||||.|..|..|||| ||||||||||||||||
BL03675___rec 722 AACAAATGGACAATATGAAAAAGATGCTGGGCGATGAAAACAAAAGTTGA 771
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.