Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03772 and BL03673
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03772___cdd.1.5803.seq
# -bsequence dna-align/BL03673___cdd.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03772___cdd-BL03673___cdd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03772___cdd-BL03673___cdd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03772___cdd
# 2: BL03673___cdd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 413
# Identity: 317/413 (76.8%)
# Similarity: 317/413 (76.8%)
# Gaps: 4/413 ( 1.0%)
# Score: 1196.0
#
#
#=======================================
BSNT_03772___ 1 ATGAACAGACAAGAATTAATAACAGAAGCTTTAAAAGCGCGTGATATGGC 50
.|||..|.|||||||||.||..||||||||||||||||..|.||..|.||
BL03673___cdd 1 TTGACTAAACAAGAATTGATTGCAGAAGCTTTAAAAGCAAGGGAATTTGC 50
BSNT_03772___ 51 ATATACGCCGTATTCCAAATTCCAAGTAGGAGCCGCTCTTCTTACCAAGG 100
||||...||||||||.||||||.||||.||.||.||.|||.|.|||.|.|
BL03673___cdd 51 ATATGTTCCGTATTCGAAATTCAAAGTCGGCGCTGCACTTTTAACCGAAG 100
BSNT_03772___ 101 ATGGAAAAGTGTACAGAGGCTGCAACATTGAGAACGCGGCATACAGCATG 150
|.||.||.|||||||.|||||||||||||||.||.||.|||||||||.||
BL03673___cdd 101 ACGGCAAGGTGTACAAAGGCTGCAACATTGAAAATGCTGCATACAGCCTG 150
BSNT_03772___ 151 TGCAATTGCGCCGAGCGTACTGCTTTATTTAAAGCTGTTTCTGAAGGGGA 200
|||||.|||||||||||.||.||..|.||.||.|||..|||.||||||||
BL03673___cdd 151 TGCAACTGCGCCGAGCGGACAGCGCTGTTCAAGGCTTATTCAGAAGGGGA 200
BSNT_03772___ 201 TACAGAGTTTCAGATGCTGGCCGTTGCGGCTGACACCCCTGGACCGGTAT 250
.|.|...|||.|||||||.||||||||.||.||.||.||.||.|||||.|
BL03673___cdd 201 AAAATCCTTTAAGATGCTTGCCGTTGCTGCGGATACGCCGGGTCCGGTGT 250
BSNT_03772___ 251 CTCCGTGCGGAGCCTGCCGCCAGGTGATTTCTGAGCTTTG--CACAAAAG 298
|.||||||||.||||||.|.|||||||||||.||.||||| |.|.||
BL03673___cdd 251 CGCCGTGCGGCGCCTGCAGACAGGTGATTTCCGAACTTTGTTCGCCAA-- 298
BSNT_03772___ 299 ACGTTATTGTCGTACTAACTAATTTACAAGGACAAATAAAAGAAATGACT 348
||.|...||||.|..||||.|||.|..|.||.|||.|.|||||||||||.
BL03673___cdd 299 ACATGCCTGTCATCTTAACCAATCTGAATGGCCAAGTCAAAGAAATGACG 348
BSNT_03772___ 349 GTGGAAGATTTATTGCCAGGCGCATTTTCATCGGAGGATTTACATGACGA 398
||..||||.|||.|||||||.|||||||||||||||||.|||||||||..
BL03673___cdd 349 GTTCAAGAATTACTGCCAGGAGCATTTTCATCGGAGGACTTACATGACAC 398
BSNT_03772___ 399 ACGAAAGCTTTAA 411
|.|||||||||||
BL03673___cdd 399 AGGAAAGCTTTAA 411
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