Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03774 and BL03672
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03774___dgkA.1.5803.seq
# -bsequence dna-align/BL03672___dgkA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03774___dgkA-BL03672___dgkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03774___dgkA-BL03672___dgkA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03774___dgkA
# 2: BL03672___dgkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 263/420 (62.6%)
# Similarity: 263/420 (62.6%)
# Gaps: 87/420 (20.7%)
# Score: 726.0
#
#
#=======================================
BSNT_03774___ 1 ATGGACTCAAAAGA---TCATAGA-------AATGAG------CTG--AA 32
||||.|||..|||| |||||.| |||| | ||| ||
BL03672___dgk 1 ATGGGCTCTCAAGATCCTCATAAACAAAACGAATG-GCGCCGTCTGAAAA 49
BSNT_03774___ 33 TCGA-TTCTTCAAAAG-CTTCGTGCATGCAGGCCGGGGCATCTGGGAAA- 79
| || ||.||||||.| ||| |.|||| ||
BL03672___dgk 50 T-GAGTTTTTCAAACGCCTT------TACAGG---------------AAT 77
BSNT_03774___ 80 ---CAGTGCGGACG---------GAGCGGAATTTCCAATTTCA-TGCCGC 116
|| .|||| |||||.|||||...|.|||| || ||.
BL03672___dgk 78 TATCA----AGACGTTCATATCAGAGCGCAATTTTAGAATTCACTG-CGG 122
BSNT_03774___ 117 AGCCGCC-TGCGC-TGTTCTCATTTGCGGC--TTCCTTGTAGAGCTCA-G 161
||||||| |.|.| ||.||.| .|||||| ||.||| .|| |||.| |
BL03672___dgk 123 AGCCGCCATCCTCGTGATCGC--CTGCGGCTTTTTCTT-CAG-GCTGACG 168
BSNT_03774___ 162 CATGATTGAGTGGATGATTATATTCCTTTTGATAGGCGGTATGTTTTCGC 211
| ||||.||.||||...|.||.||..|..||||.|||||.||| .||||
BL03672___dgk 169 C-TGATCGAATGGACCGTCATCTTGATCCTGATCGGCGGAATG--CTCGC 215
BSNT_03774___ 212 --TTGAGCTTTTAAATACAGCCATTGAACATACGGTGGA---TTTAATAA 256
|.|||||..|.|||||.||..||||.||||||||.|| .||.|.||
BL03672___dgk 216 CTTGGAGCTGATGAATACGGCTGTTGAGCATACGGTCGACCTCTTCACAA 265
BSNT_03774___ 257 CTGACAAACATCACCCTCTTGCTAAAGCGGCCAAGGACGCTGCCGCCGGG 306
..||.| |.|||||.|||||.|||||.||.||||||||.||.||||||
BL03672___dgk 266 AAGAGA---ACCACCCGCTTGCAAAAGCTGCAAAGGACGCGGCAGCCGGG 312
BSNT_03774___ 307 GCTGTTTGCGTTTTTGCCGTGATTTCGTGTATCATTGGTTTACTTATTTT 356
||.||||||||.|||||.|...||||||||||.|||||.||||||||.||
BL03672___dgk 313 GCGGTTTGCGTGTTTGCAGCCGTTTCGTGTATGATTGGGTTACTTATCTT 362
BSNT_03774___ 357 TTTGCCAAAGCTGT----AA 372
||||.||||..||| |
BL03672___dgk 363 TTTGTCAAAATTGTTTTGA- 381
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