Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03775 and BL03671

See Amino acid alignment / Visit BSNT_03775 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence dna-align/BSNT_03775___yqfG.1.5803.seq
#    -bsequence dna-align/BL03671.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03775___yqfG-BL03671.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03775___yqfG-BL03671.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03775___yqfG
# 2: BL03671
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity:     347/490 (70.8%)
# Similarity:   347/490 (70.8%)
# Gaps:          29/490 ( 5.9%)
# Score: 1179.0
# 
#
#=======================================

BSNT_03775___      1 ATGAGTTTACTGATTGATATCGTTGATGAAACAGGAAGCGTCTCAGAAGA     50
                     |||||||||.|..|.||||||...||.||.||.|||.|||||.|.|||||
BL03671            1 ATGAGTTTAATTCTAGATATCACAGACGAGACCGGACGCGTCCCTGAAGA     50

BSNT_03775___     51 GC----TGCTCAAAGAAGTAGAAAATCTGCTTCAATTTGCCGCTGAGCGT     96
                     .|    ||||    |||.|.|||||.||.||||||||.||.||.|.|...
BL03671           51 CCGGCTTGCT----GAAATTGAAAAGCTTCTTCAATTCGCAGCGGCGGAG     96

BSNT_03775___     97 GAAGGCGTTCAAGACCAGGCTGAAGTTTCTGTCACGATTGTTTCCAATGA    146
                     ||||||||...||||...||.|||||.||.||.|||||.||...||||||
BL03671           97 GAAGGCGTCGCAGACGGCGCCGAAGTCTCGGTTACGATCGTCAACAATGA    146

BSNT_03775___    147 TGACATACATCAGATTAACAAAGAATACCGGGGAAAGGATGCTCCGACAG    196
                     .||.|||||..|.||.||||||||.|||.|.||.||.|||...|||||.|
BL03671          147 AGAGATACAAAAAATCAACAAAGAGTACAGAGGCAAAGATTACCCGACTG    196

BSNT_03775___    197 ATGTCATCTCATTTGCTCTTGAAGAAGAGGGAGAAGGCGAGATCGAAATC    246
                     |.|||||.||||||||.||.||||||||.||.|||||.|||.|.|||||.
BL03671          197 ACGTCATTTCATTTGCCCTCGAAGAAGACGGCGAAGGAGAGGTTGAAATT    246

BSNT_03775___    247 GTGGGCGCCGAAATGCCTCCGGTTTTAGGTGATATTATCATCAGTGCCGA    296
                     .|.|||||.||.|||||.||.|||.|.||.|||||.||||||||.|.|||
BL03671          247 ATCGGCGCTGATATGCCGCCCGTTCTCGGAGATATCATCATCAGCGTCGA    296

BSNT_03775___    297 TCGCACAA-----GAGAGCAGGCAGAGGAGTATAATCATTCTTTTAAAAG    341
                     |     ||     |.||.|||||.||.||.||....|||||..|.|..||
BL03671          297 T-----AAAGCCCGGGAACAGGCCGAAGAATACGGACATTCACTGATGAG    341

BSNT_03775___    342 AGAGCTCGGATTTCTAGCTGTACACGGATTTCTGCACCTTTTAGGATATG    391
                     .|||||.||.|||||..|.||.|||||.|||.|||||||..|.||.||||
BL03671          342 GGAGCTGGGTTTTCTGACGGTTCACGGCTTTTTGCACCTCCTCGGCTATG    391

BSNT_03775___    392 ACCATATGACGAAAGAGGAAGAAG---AGGAGATGTTTACTAAGCAAAAG    438
                     ||||||||||   |||||||||||   |.||||||||.||||||||||||
BL03671          392 ACCATATGAC---AGAGGAAGAAGAAAAAGAGATGTTCACTAAGCAAAAG    438

BSNT_03775___    439 GAATTGCTGGA-CGCTTATGGACTCAAAAGA---TCATAG    474
                     |||.|..||.| || .|||||.|||..||||   |||||.
BL03671          439 GAAATTTTGAATCG-ATATGGGCTCTCAAGATCCTCATAA    477


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