Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03777 and BL03669
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence dna-align/BSNT_03777___phoH.1.5803.seq
# -bsequence dna-align/BL03669___phoH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03777___phoH-BL03669___phoH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03777___phoH-BL03669___phoH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03777___phoH
# 2: BL03669___phoH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 974
# Identity: 743/974 (76.3%)
# Similarity: 743/974 (76.3%)
# Gaps: 28/974 ( 2.9%)
# Score: 2804.0
#
#
#=======================================
BSNT_03777___ 1 ATGACAGAACATTTACTTGCGATGAATCAAAAACTGAAAAACCCGGACGA 50
|||||||||||.|||||||||||..||||..|||||.|||..|||.|.||
BL03669___pho 1 ATGACAGAACACTTACTTGCGATTCATCAGCAACTGGAAAGTCCGAATGA 50
BSNT_03777___ 51 GGCGCTTTCA----CTCTTCGGGAACCAAGATTCTTTTTTGAAATTGATG 96
||| ||| ||.||.||||||||.|||||...||||||.||||||
BL03669___pho 51 GGC----TCAAGCGCTGTTTGGGAACCAGGATTCCCATTTGAAGTTGATG 96
BSNT_03777___ 97 GAGAAAGATCTGAATGTAAATATCA----TTACGCGCGGCGAGACGATTT 142
|||.||||.|||| |.||.||| |.||||||||.||.||..|.|
BL03669___pho 97 GAGGAAGAGCTGA----ACATTTCAATTGTCACGCGCGGAGAAACCGTGT 142
BSNT_03777___ 143 ATGTTTCAGGCGATGATGAATCGTTTCAGATTGCAGACAGGCTGCTGGGA 192
||||..||||.|||||.|||.|||||.|.||.||.|||||.|||||.|..
BL03669___pho 143 ATGTGACAGGAGATGAAGAAACGTTTGAAATCGCGGACAGCCTGCTTGCC 192
BSNT_03777___ 193 TCGCTCCTCGCTTTAATTCGCAAGGGGATAGAGATCTCTGAACGTGATGT 242
||.|||||...|.|.||.|||||.||.||.|||||.||.|||||.|||||
BL03669___pho 193 TCTCTCCTAAATCTGATCCGCAAAGGAATCGAGATATCCGAACGCGATGT 242
BSNT_03777___ 243 GATTTACGCCATCAAAATGGCAAAGAAGAATGAA-CTTGAATACTTTGAA 291
..|.||.||.|||||.|||||.||.|||.| ||| |||||.|..||||||
BL03669___pho 243 CTTGTATGCGATCAAGATGGCGAAAAAGCA-GAAGCTTGAGTTTTTTGAA 291
BSNT_03777___ 292 AGCATGTATGAAGAAGAAATTACAAAAAACGCAAAAGGCAAATCAATCCG 341
||||||||||||||.||||||||.||||||||.|||||.|||.|.|||.|
BL03669___pho 292 AGCATGTATGAAGAGGAAATTACGAAAAACGCCAAAGGAAAACCGATCAG 341
BSNT_03777___ 342 TGTAAAAACAATGGGACAGCGGGAATACGTGGCCGCTATGAAGCGGAATG 391
.||.|||||.||.||.||..|.||||||.|.|||||.|||||..||.|.|
BL03669___pho 342 AGTCAAAACCATCGGTCAAAGAGAATACATCGCCGCCATGAAAAGGCACG 391
BSNT_03777___ 392 ACCTTGTATTCGGCATTGGTCCGGCGGGAACCGGGAAAACGTACCTGGCT 441
||.|..|.||||||||.||.||.||.|||||.||||||||.||..|||||
BL03669___pho 392 ACTTAATCTTCGGCATCGGCCCAGCAGGAACGGGGAAAACCTATTTGGCT 441
BSNT_03777___ 442 GTCGTAAAAGCAGTCCATGCTTTAAAAAACGGACATATCAAAAAAATCAT 491
||||||||.||.||.||||...|.||||||||||..||||||||.|||||
BL03669___pho 442 GTCGTAAAGGCCGTTCATGAACTGAAAAACGGACGCATCAAAAAGATCAT 491
BSNT_03777___ 492 TTTAACAAGACCTGCCGTGGAAGCCGGTGAAAGCCTTGGTTTTCTCCCAG 541
|||.||||||||.||.||.|||||.||.||||||||.||.|||.|.||.|
BL03669___pho 492 TTTGACAAGACCAGCTGTTGAAGCAGGGGAAAGCCTCGGATTTTTACCGG 541
BSNT_03777___ 542 GTGACCTAAAAGAAAAAGTAGATCCTTATTTGCGCCCGCTGTATGACGCT 591
|.||..||||.||.|||||.||.||||||||..|.||||||||.||.||.
BL03669___pho 542 GGGATTTAAAGGAGAAAGTCGACCCTTATTTAAGGCCGCTGTACGATGCG 591
BSNT_03777___ 592 CTCCATGATGTGCTTGGGGCAGATCATACAGAACGTCTGATGGAAAGAGG 641
||||||||||||||.||..|.||.|||||.|.|||.|||.|.||||||||
BL03669___pho 592 CTCCATGATGTGCTCGGAACGGACCATACGGCACGGCTGCTTGAAAGAGG 641
BSNT_03777___ 642 CATCATTGAAATTGCTCCGCTCGCATATATGAGGGGGCGGACGCTCGATG 691
.|..||||||||.||.|||||.||.||.|||||||||||||||||.||.|
BL03669___pho 642 AACGATTGAAATCGCGCCGCTTGCTTACATGAGGGGGCGGACGCTTGACG 691
BSNT_03777___ 692 ATGCTTATGTTATACTTGATGAAGCACAGAATACCACGCCTGCTCAAATG 741
|.||.|.|||.||..|.||||||||.||||||||.||.||.||.||||||
BL03669___pho 692 ACGCATTTGTGATTTTGGATGAAGCGCAGAATACGACACCGGCACAAATG 741
BSNT_03777___ 742 AAAATGTTTTTGACGAGACTGGGTTTTGGCTCTAAAATGATCATTACAGG 791
||||||||||||||||||.||||||||||.|||||||||.||||||||||
BL03669___pho 742 AAAATGTTTTTGACGAGATTGGGTTTTGGATCTAAAATGGTCATTACAGG 791
BSNT_03777___ 792 TGACGTCAGCCAAATTGATCTGCCGAAAGGCGTCAAATCGGGACTTGCAG 841
.|||.|.|..|||||.|||.||||.||.|||||||.|||.||.|||||.|
BL03669___pho 792 CGACATTACGCAAATCGATTTGCCAAAGGGCGTCACATCAGGGCTTGCCG 841
BSNT_03777___ 842 TAGCGAAGGAGATGC----TGAAAGGAATAGACGGCATTTCTATGATTGA 887
|.||.||..|||||| ||| .||.||.||||||||.||..||||
BL03669___pho 842 TTGCAAAAAAGATGCTCCTTGA----TATCGAGGGCATTTCAATTGTTGA 887
BSNT_03777___ 888 GCTAGACCAGACAGACGTGGTCAGACATCCGCTTGTTGCGAAAATTATTG 937
.||.||.|||||.||||||||||||||.||||||||.||....|||||||
BL03669___pho 888 ACTGGATCAGACGGACGTGGTCAGACACCCGCTTGTCGCCCGTATTATTG 937
BSNT_03777___ 938 AAGCATACGATAAG-CAAAATTAA 960
||||||||||.||| ||||||.|
BL03669___pho 938 AAGCATACGAAAAGTCAAAATAA- 960
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