Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02755 and BL03664
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_02755___mutL.1.5803.seq
# -bsequence dna-align/BL03664___mutL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02755___mutL-BL03664___mutL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02755___mutL-BL03664___mutL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02755___mutL
# 2: BL03664___mutL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2012
# Identity: 1410/2012 (70.1%)
# Similarity: 1410/2012 (70.1%)
# Gaps: 223/2012 (11.1%)
# Score: 4960.0
#
#
#=======================================
BSNT_02755___ 1 ATGAATGTGGCAAAAGTCATCCAGCTGTCAGATGAGCTTTCAAATAAAAT 50
.||||||||.|..|.||||||.|.||.||..|.||.||||||||
BL03664___mut 1 ------TTGGCAAAAATTGTTCAGCTGCCTGACGATTTATCGAATAAAAT 44
BSNT_02755___ 51 AGCGGCGGGCGAGGTTGTGGAACGGCCCGCCTCAGTCGTCAAAGAATTGG 100
.||||||||.||.||.||||||.||||.||.||.|||||||||||..|.|
BL03664___mut 45 CGCGGCGGGTGAAGTAGTGGAAAGGCCGGCGTCGGTCGTCAAAGAGCTTG 94
BSNT_02755___ 101 TGGAAAATGCGATCGACGCTGACAGCACAGTCATTGAAATCGATATTGAG 150
|.||||||||.|||||.||..|||||.|.||.||||||||||||.||||.
BL03664___mut 95 TCGAAAATGCAATCGATGCGAACAGCTCCGTGATTGAAATCGATGTTGAA 144
BSNT_02755___ 151 GAAGCAGGCCTTGCATCCATTCGGGT-CTTGGATAACGGCGAAGGAATGG 199
|||||.||.||.||.||.|||...|| ||| ||..||||||||||.||||
BL03664___mut 145 GAAGCGGGTCTCGCCTCGATTAAAGTGCTT-GACGACGGCGAAGGGATGG 193
BSNT_02755___ 200 A-GAATGAAGATTGCA-AGCGAGCTTTCCGCCGCCACGCAACGAGTAAAA 247
| |.| |||||.|||| |.|| |||||....||.||.||.||.||.||||
BL03664___mut 194 ACGCA-GAAGACTGCAGAACG-GCTTTTTTGCGTCATGCCACAAGCAAAA 241
BSNT_02755___ 248 TAAAAGATGAAAATGATTTATTCAGGGTGAGAACGCTCGG-TTTCAGGGG 296
|.|||||.|||||.||..|.||..|.||.||||||||||| |||| |.||
BL03664___mut 242 TCAAAGACGAAAACGACCTGTTTCGCGTCAGAACGCTCGGATTTC-GCGG 290
BSNT_02755___ 297 AGAAGCCCTGCCGAGTATCGCGTCAGTCTCTCATCTGGAG-ATTACAACA 345
||||||..||||.|||||||||||.|||||.|| ||..|| ||||.|||.
BL03664___mut 291 AGAAGCTTTGCCAAGTATCGCGTCTGTCTCACA-CTTAAGCATTAAAACG 339
BSNT_02755___ 346 AGCACTGGTGAAGGAGCTGGGAC------GAAGCTCGTCCTCCAAGGAGG 389
|||||.||.|||||.||.||.|| ||.| ||.||.||.||
BL03664___mut 340 AGCACCGGAGAAGGGGCAGGCACCCATTTGACG------CTGCAGGGGGG 383
BSNT_02755___ 390 AAACATCATTTCCG------AATCGCGTTCCTCAAGCAGGAAGGGAACTG 433
||..|||||||||| ||.||| |||||.|.|..|||||.|
BL03664___mut 384 AAGAATCATTTCCGAGCAAAAAGCGC------CAAGCCGCAGAGGAACCG 427
BSNT_02755___ 434 AAATTGTCGTTTCCAACCTGTTTTTTAACACACCGGCCCGTTTGAAATAT 483
|||||...|||.|||||||||||||.||.||.|||||..|..|||||||.
BL03664___mut 428 AAATTACGGTTACCAACCTGTTTTTCAATACGCCGGCAAGGCTGAAATAC 477
BSNT_02755___ 484 ATGAAAACCGTTCATACAGAGCTTGGAAACATTACAGACGTGGTTAACCG 533
||||||||..|||||||.||||||||.|||||.|||||.|||||.|||.|
BL03664___mut 478 ATGAAAACGATTCATACCGAGCTTGGCAACATCACAGATGTGGTCAACAG 527
BSNT_02755___ 534 TATTGCTCTGGCGCATCCAGAGGTATCGATCCGCCTGCGACATCATGGGA 583
.||.||.||.||.|||||.||.||.||||||.|.|||||.|||||.||||
BL03664___mut 528 AATCGCCCTTGCCCATCCGGAAGTTTCGATCAGGCTGCGTCATCAAGGGA 577
BSNT_02755___ 584 AAAACCTGCTTCAAACGAACGGAAACGGAGATGTGCGCCATGTACTGGCA 633
|||..||.||.||.||.|||||||||||.|||||.|||||.||.||.||.
BL03664___mut 578 AAACGCTTCTGCAGACAAACGGAAACGGCGATGTCCGCCACGTGCTTGCG 627
BSNT_02755___ 634 GCGATTTACGGCACGGCTGTCGCCAAAAAAATGCTTCCGCTGCATGCGAG 683
|||||||||||||||||.||.||||||||||||||.|||||..|.|||||
BL03664___mut 628 GCGATTTACGGCACGGCGGTTGCCAAAAAAATGCTCCCGCTTGAAGCGAG 677
BSNT_02755___ 684 CTC-CTTGGATTTTGAAGTAAAGGGATATATCGCCCTCCCAGAGATTACA 732
.|| ||| ||.||||||||.|||||.||||||||.||.||.||.|||||.
BL03664___mut 678 ATCTCTT-GACTTTGAAGTGAAGGGCTATATCGCTCTTCCTGAAATTACG 726
BSNT_02755___ 733 CGGGCGTCGAGAAACTATATGTCGTCTGTGGTCAATGGCCGTTACATTAA 782
||.||.|||.||||.||.|||||.|||||.|||||.|||.|.||||||||
BL03664___mut 727 CGCGCCTCGCGAAATTACATGTCATCTGTCGTCAACGGCAGATACATTAA 776
BSNT_02755___ 783 AAATTTCCCGCTCGTCAAAGCGGTTCATGAAGGCTATCATACGCTTCTGC 832
|||.|||||||||||.||||||.|.||.||.|||||.|||||||||||.|
BL03664___mut 777 AAACTTCCCGCTCGTAAAAGCGATCCACGAGGGCTACCATACGCTTCTTC 826
BSNT_02755___ 833 CGATCGGACGCCATCCGATTACTTTTATAGAAATTACGATGGACCCGATT 882
|||||||.|||||||||||.||.||.||.|||||.|..|||||||||.|.
BL03664___mut 827 CGATCGGCCGCCATCCGATCACGTTCATTGAAATCAACATGGACCCGCTC 876
BSNT_02755___ 883 TTAGTCGATGTCAATGTGCATCCATCGAAGCTTGAGGTCCGGCTCAGCAA 932
.|.||.||.|||||.|||||.||.||.|||||.||||||.||||.|||||
BL03664___mut 877 CTTGTGGACGTCAACGTGCACCCGTCAAAGCTGGAGGTCAGGCTGAGCAA 926
BSNT_02755___ 933 GGAAACAGAGCTTCATGACTTAATTCGTGACGGAATTAAAGATGTATTTA 982
.||.||.||||||||.||..|.|||||.||||..||.|||||.||.||||
BL03664___mut 927 AGAGACGGAGCTTCACGAGCTGATTCGCGACGCCATCAAAGACGTCTTTA 976
BSNT_02755___ 983 AACAGCAGCAGCTGATTCCGAGTGCCCAGCTTCCGAAAAAATCGGCACCT 1032
|||||||||||||.|||||.||.|..|||.|.|||||||||.|.||||||
BL03664___mut 977 AACAGCAGCAGCTCATTCCAAGCGTGCAGGTCCCGAAAAAAACCGCACCT 1026
BSNT_02755___ 1033 GTTATCAAAAA---TGAGCAACA-------------------GTTC-ATA 1059
.|.|||||.|| .|||||.|| ||.| |.|
BL03664___mut 1027 CTGATCAATAAACCAGAGCAGCAAAAGCTTGATTTCGACCAGGTACGAGA 1076
BSNT_02755___ 1060 ACC----------TTTGATGAAAAGCCTCCG-----GAAAGAAAAGTA-- 1092
||| |.|||| ||.| ||||| |.||||
BL03664___mut 1077 ACCGGCACCTCTTTCTGAT--------TCTGATGTTGAAAG-AGAGTATA 1117
BSNT_02755___ 1093 --CCGGAAAAAGCGCATGCGCCATCTTATTCACCAATGAAGCTCAGCTCA 1140
||||| |||.||.|.|||..|.|||||..|.|||||.
BL03664___mut 1118 AGCCGGA------------GCCTTCGTTTTCGGCGATGAAATTAAGCTCG 1155
BSNT_02755___ 1141 GTCGTGAAAGAGCCGATTGATGCGGAGGAAGAATTGCCTCCTCTCCAATT 1190
.|.||.|||||.|| |||.||| |||
BL03664___mut 1156 CTTGTCAAAGACCC---------------------GCCGCCT-TCC---- 1179
BSNT_02755___ 1191 TGATGCTCCATCTATCGTTGATCAGGAACAAACCCT--TG-AGGTGTCCG 1237
||||| |||.||.|..|||.|||.|.| || |||...|||
BL03664___mut 1180 ----GCTCC------CGTAGAGCGCGAAGAAAACGTAATGCAGGACACCG 1219
BSNT_02755___ 1238 A---TGTTT---------CAGAAGA----ACTGCCTGAA----------- 1260
| ||..| |.||||| || |||||||
BL03664___mut 1220 AGCCTGAATGGCCCGGAGCTGAAGAGTATAC-GCCTGAAGCCGCGCCGGC 1268
BSNT_02755___ 1261 ---ACATTTGAGCAGGAATGCCATGAGGAACA-GCAGCAGCCAGCGTC-- 1304
||| |||||.| || |||||| ||||.||..|.||||
BL03664___mut 1269 CGTACA----AGCAGAA---CC----GGAACAGGCAGGAGAGAACGTCCA 1307
BSNT_02755___ 1305 ------------------TGAGCGGGTTCCGATTATGTACCCGATCGGCC 1336
.||..||||.|||||.|||||.||||||||||
BL03664___mut 1308 GGACGAAGAGACGCCAAAAGAAAGGGTGCCGATCATGTATCCGATCGGCC 1357
BSNT_02755___ 1337 AGATGCACGGGACTTATATATTGGCACAAAACGAAAACGGCCTGTATATT 1386
|.||||||||.||.||.|||.|.||.|||||.||||||||.|||||.||.
BL03664___mut 1358 AAATGCACGGCACCTACATACTTGCCCAAAATGAAAACGGGCTGTACATC 1407
BSNT_02755___ 1387 ATCGACCAGCACGCCGCCCAAGAACGTATTAAATATGAGTACTTTCGTGA 1436
|||||.|||||||||||.||.||.||.||.|||||.||.||.||.|||||
BL03664___mut 1408 ATCGATCAGCACGCCGCACAGGAGCGGATCAAATACGAATATTTCCGTGA 1457
BSNT_02755___ 1437 AAAGGTGGGGGAGGTTGAGCCTGAAGTGCAGGATATGATTGTACCGCTGA 1486
|||.||.|||||.||.||..|.|||||.|||||..||.||||.|||||||
BL03664___mut 1458 AAAAGTCGGGGAAGTCGAATCGGAAGTCCAGGACCTGCTTGTGCCGCTGA 1507
BSNT_02755___ 1487 CGTTCCACTACTCCACAAATGAGGCTTTGATTATTGAACAGCACAAACAA 1536
|.|||||.||.||.|.||||||.||..|||..||.||.||||||....|.
BL03664___mut 1508 CATTCCATTATTCAAAAAATGAAGCGCTGACGATCGACCAGCACTTGGAC 1557
BSNT_02755___ 1537 GAGCT--CGAAAGCGTCGGTGTCTTTTTAGAGTCATTCGGCTCTAACAGT 1584
||..| |.||| |||||.||||||.|.||.||.||||||.|...|||.
BL03664___mut 1558 GATTTAGCCAAA--GTCGGCGTCTTTCTCGAATCGTTCGGCGCCGGCAGC 1605
BSNT_02755___ 1585 TACATCGTCCGCTGCCACCCGGCCTGGTTTCC-AAAGGGAGAAGAAGCAG 1633
||.||||||||.|||||||||.|.|||||||| |||||| ||||||.| |
BL03664___mut 1606 TATATCGTCCGATGCCACCCGACATGGTTTCCGAAAGGG-GAAGAAAC-G 1653
BSNT_02755___ 1634 A-GCTTATAGAAGAAATCATTCAGCAGGTGCTCGA----CTCCAAAAATA 1678
| |.|.||.|||||.||||||||||||||.||.|| |.| |..|
BL03664___mut 1654 ACGATCATTGAAGACATCATTCAGCAGGTCCTTGATGACCGC----ACGA 1699
BSNT_02755___ 1679 TAGATATTAAAAAACTCCGCGAGGAAGCGGCGATTATGATGAGCTGCAAA 1728
|.||.||.||||||||.|||||.|||||.||.||.|||||||||||||||
BL03664___mut 1700 TCGACATCAAAAAACTGCGCGAAGAAGCCGCAATCATGATGAGCTGCAAA 1749
BSNT_02755___ 1729 GGCTCCATCAAAGCAAATCGCCACCTCAGAAACGATGAAATCAAAGCGCT 1778
||||||||||||||.||||..|||||..|..||||.|||||||..||.||
BL03664___mut 1750 GGCTCCATCAAAGCCAATCATCACCTGCGGGACGACGAAATCACCGCCCT 1799
BSNT_02755___ 1779 TCTGGACGACCTCCGAAGCACATCAGACCCATTTACATGCCCGCACGGCC 1828
.||.||.||.||.||.||.|||||.|||||.||.||||||||||||||||
BL03664___mut 1800 GCTCGATGAGCTGCGCAGAACATCCGACCCTTTCACATGCCCGCACGGCC 1849
BSNT_02755___ 1829 GCCCGATCATCATTCACCACTCGACATATGAGATGGAAAAGATGTTCAAA 1878
|.|||||||||||.|||.||||.||.|||||||||||.||||||||.||.
BL03664___mut 1850 GGCCGATCATCATCCACTACTCCACCTATGAGATGGAGAAGATGTTTAAG 1899
BSNT_02755___ 1879 CGCGTGATGTAG 1890
||.||.|||||.
BL03664___mut 1900 CGGGTAATGTAA 1911
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