Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02753 and BL03662
See
Amino acid alignment /
Visit
BSNT_02753 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02753___cotE.1.5803.seq
# -bsequence dna-align/BL03662___cotE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02753___cotE-BL03662___cotE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02753___cotE-BL03662___cotE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02753___cotE
# 2: BL03662___cotE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 550
# Identity: 453/550 (82.4%)
# Similarity: 453/550 (82.4%)
# Gaps: 5/550 ( 0.9%)
# Score: 1866.0
#
#
#=======================================
BSNT_02753___ 1 ATGTCTGAATACAGGGAAATTATTACGAAGGCAGTAGTAGCGAAAGGCCG 50
|||||||||||||||||||||||.||.||.||.||.||.|||||||||||
BL03662___cot 1 ATGTCTGAATACAGGGAAATTATCACTAAAGCGGTGGTCGCGAAAGGCCG 50
BSNT_02753___ 51 AAAATTCACCCAATGCACCAACACCATCTCGCCTGAGAAAAAACCGAGCA 100
.|||||||||||.|.|||..|.||.|||||.|||..|.||||.||.|.||
BL03662___cot 51 GAAATTCACCCAGTCCACTCATACAATCTCCCCTTCGCAAAAGCCAACCA 100
BSNT_02753___ 101 GCATTTTGGGTGGTTGGATTATTAACCACAAGTATGACGCTGAAAAAATT 150
|.|||||.||.|||||||||||.||.||.||||||||||||||||||||.
BL03662___cot 101 GTATTTTAGGCGGTTGGATTATCAATCATAAGTATGACGCTGAAAAAATC 150
BSNT_02753___ 151 GGAAAAACGGTAGAAATTGAAGGGTATTATGATATAAACGTATGGTACTC 200
||||||||.||.||||||||||||...||||||||.|||||.|||||.||
BL03662___cot 151 GGAAAAACCGTGGAAATTGAAGGGACATATGATATCAACGTCTGGTATTC 200
BSNT_02753___ 201 TTACGCGGACAACACAAAGACAGAGGTTGTCACAGAACGGGTAAAATATG 250
.||.|||||||||||.||.||.||.|||||.||||||||.||....||||
BL03662___cot 201 ATATGCGGACAACACCAAAACCGAAGTTGTGACAGAACGCGTTTCCTATG 250
BSNT_02753___ 251 TAGATGTCATTAAACTCAGATACAGAGACAATAATTACTTAGATGATGAG 300
|.|||||||||||.|||.|.||..|.|||||.|||||||||||||||||.
BL03662___cot 251 TTGATGTCATTAAGCTCCGGTATCGCGACAAAAATTACTTAGATGATGAA 300
BSNT_02753___ 301 CATGAAGTGATTGCCAAAGTGCTTCAGCAGCCAAACTGCCTTGAAGTGAC 350
||.|||||.|||||.|||||||||||||||||.|||||||||||||||||
BL03662___cot 301 CACGAAGTCATTGCGAAAGTGCTTCAGCAGCCGAACTGCCTTGAAGTGAC 350
BSNT_02753___ 351 CATTTCGCCGAATGGAAATAAAATCGTTGTGCAGGCAGAAAGAGAATTTT 400
||||||.|||||.|||||.|||.|.|||||.|||||.|||||||||||||
BL03662___cot 351 CATTTCTCCGAACGGAAACAAAGTGGTTGTACAGGCGGAAAGAGAATTTT 400
BSNT_02753___ 401 TGGCGGAAGTGGTAGGGGAAACAAAGGTAGTTGTTGAGGTCAATCCTGAC 450
|.||.||.||.||.||.||.||.|||||.||.||||||||||||.||||.
BL03662___cot 401 TAGCAGAGGTCGTCGGCGAGACGAAGGTCGTCGTTGAGGTCAATTCTGAT 450
BSNT_02753___ 451 TG---GGAAGAG-GATGACGAGGAAGATTGGGAAGATGAGCTTGATGAAG 496
|| |||| || |||||.||.||||..||||||||.|||||||||||||
BL03662___cot 451 TGGACGGAA-AGCGATGAAGAAGAAGCGTGGGAAGAAGAGCTTGATGAAG 499
BSNT_02753___ 497 AGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAA 546
|.|||||.||.|||||.||.||||||||.||.||||||||.|||||||||
BL03662___cot 500 AACTTGAGGATATCAATCCCGAGTTTTTGGTTGGAGATCCAGAAGAATAA 549
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.