Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02751 and BL03661
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02751___ymcA.1.5803.seq
# -bsequence dna-align/BL03661___ymcA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02751___ymcA-BL03661___ymcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02751___ymcA-BL03661___ymcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02751___ymcA
# 2: BL03661___ymcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity: 343/438 (78.3%)
# Similarity: 343/438 (78.3%)
# Gaps: 12/438 ( 2.7%)
# Score: 1320.0
#
#
#=======================================
BSNT_02751___ 1 ATGACGCTCTACTCAAAAAAAGACATTG-TGCAGCAGGCACGAAACCTTG 49
.|||||||.||..|.||||||||.|||| |||| .|.||.||..|.||.|
BL03661___ymc 1 GTGACGCTTTATACGAAAAAAGAGATTGTTGCA-AAAGCGCGGGAGCTCG 49
BSNT_02751___ 50 CAAAAATGATTTCTGAAACAGAAGAGGTTGATTTTTTCAAACGGGCTGAA 99
|||||||||||.|.|||||.|||||.||.||.|||||||||...||.||.
BL03661___ymc 50 CAAAAATGATTGCAGAAACGGAAGAAGTCGACTTTTTCAAAAAAGCGGAG 99
BSNT_02751___ 100 GCGCAAATCAATGAGAATGACAAAGT---GTCCACAATCGTTAATCAGAT 146
||.||.||.||||||||||.||||.| |..||.|||| ||.||.||
BL03661___ymc 100 GCACAGATTAATGAGAATGCCAAAATAACGGGCATAATC---AACCAAAT 146
BSNT_02751___ 147 TAAAGCCCTGCAAAAGCAGGCTGTCAATCTGAAGCATTATGAAAAGCATG 196
.|||||||||||||||||.||.|||||..|.||.|||||.||||||||.|
BL03661___ymc 147 CAAAGCCCTGCAAAAGCAAGCCGTCAACTTTAAACATTACGAAAAGCACG 196
BSNT_02751___ 197 AAGCGCTCAAACAAGTAGAAGCAAAAATTGACGCGCTGCAAGAAGAGCTT 246
|||||||.||||||...||||||||.|||||||||||.||.|||||||||
BL03661___ymc 197 AAGCGCTTAAACAAACGGAAGCAAAGATTGACGCGCTTCAGGAAGAGCTT 246
BSNT_02751___ 247 GAAGAGATTCCTGTTATCCAGGAATTCAGAGACTCGCAGATGGAAGTAAA 296
||.||||||||..|.||.||.||.|||||||||||.||.||||||||.||
BL03661___ymc 247 GACGAGATTCCGATCATTCAAGAGTTCAGAGACTCCCAAATGGAAGTCAA 296
BSNT_02751___ 297 TGACCTACTGCAGCTCGTTGCACACACCATTTCCAACCAAGTCACAAATG 346
.|||||.||.|||||.||.||.||.||.||.||.||||||||.|||||.|
BL03661___ymc 297 CGACCTTCTTCAGCTTGTCGCGCATACAATATCAAACCAAGTGACAAACG 346
BSNT_02751___ 347 AAATCATCACATCAACCGGAGGCGACCTGCTGAAAGGGGAAACCGGTTCA 396
|.|||||||||||.|||||.||.||||||||||||||.||.|||||||||
BL03661___ymc 347 AGATCATCACATCGACCGGGGGAGACCTGCTGAAAGGCGAGACCGGTTCA 396
BSNT_02751___ 397 AAGGTGAAGCATTCAAATAAC--AGCTGTTCTCTCTAA 432
||.|||||..|||| ||.|| |||||||||||.|||
BL03661___ymc 397 AAAGTGAAAAATTC--ATCACCGAGCTGTTCTCTATAA 432
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