Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02749 and BL03660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02749___ymcB.1.5803.seq
# -bsequence dna-align/BL03660___ymcB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02749___ymcB-BL03660___ymcB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02749___ymcB-BL03660___ymcB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02749___ymcB
# 2: BL03660___ymcB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1541
# Identity: 1257/1541 (81.6%)
# Similarity: 1257/1541 (81.6%)
# Gaps: 22/1541 ( 1.4%)
# Score: 5150.0
#
#
#=======================================
BSNT_02749___ 1 ATGAATGAAAAACA----AAAATTAGAGAGCGGACAAGTTAATCCATCGG 46
||||||||.||||| | |.||.||||||||.||.||||||||||
BL03660___ymc 1 ATGAATGAGAAACAGCGCA----TTGAAAGCGGACAGGTCAATCCATCGG 46
BSNT_02749___ 47 ACAAAAAATCCGAGAAGGATTACAGCAAGTACTTTGAAGCTGTTTACATT 96
||||||||||||||||||||||||||||||||||.|||||||||||..||
BL03660___ymc 47 ACAAAAAATCCGAGAAGGATTACAGCAAGTACTTCGAAGCTGTTTATGTT 96
BSNT_02749___ 97 CCGCCTTCTTTAAAAGACGCGAAAAAACGAGGCAAGGAAGCCGTTACTTA 146
||||||||.||||||||.|||||||||||.|||||.||||..||||..||
BL03660___ymc 97 CCGCCTTCATTAAAAGATGCGAAAAAACGCGGCAAAGAAGAGGTTAAATA 146
BSNT_02749___ 147 TCATAATGACTTTAAAATTTCTGAACAATTTAAAGGATTGGGAGACGGAA 196
.|||||.||.||||||||.||.||.||.||.|.|||..||||.||.|||.
BL03660___ymc 147 CCATAACGATTTTAAAATCTCAGAGCAGTTCAGAGGCATGGGCGAAGGAC 196
BSNT_02749___ 197 GAAAGTTCTATATCCGTACGTACGGCTGCCAAATGAATGAACACGATACA 246
|.|||||.||.|||||.||||||||||||||.||||||||.||||||||.
BL03660___ymc 197 GGAAGTTTTACATCCGCACGTACGGCTGCCAGATGAATGAGCACGATACC 246
BSNT_02749___ 247 GAGGTTATGGCAGGGATCTTTATGGCGCTCGGTTACGAAGCGACAAACTC 296
||.||.|||||||||||.||.|||||||||||.||.|||.||||..||||
BL03660___ymc 247 GAAGTGATGGCAGGGATTTTCATGGCGCTCGGCTATGAACCGACCGACTC 296
BSNT_02749___ 297 TGTTGAC----GATGCCAATGTCATTTTGTTAAATACATGTGCAATCCGT 342
||| |||||.||.|||||||||.|.||.||.|||||.|||||.
BL03660___ymc 297 ----GACGGAAGATGCAAACGTCATTTTGCTCAACACGTGTGCGATCCGG 342
BSNT_02749___ 343 GAAAATGCTGAAAACAAGGTGTTTGGTGAGCTCGGGCACTTAAAAGCACT 392
|||||.||.||||||||.||||||||.||..||||.||.||||||||..|
BL03660___ymc 343 GAAAACGCGGAAAACAAAGTGTTTGGCGAAATCGGCCATTTAAAAGCTTT 392
BSNT_02749___ 393 GAAAAAAAACAATCCCGATCTAATTTTAGGCGTGTGCGGCTGTATGTCCC 442
|||||||.|||||||.|||.|.||..|.||.||.|||||.||||||||||
BL03660___ymc 393 GAAAAAAGACAATCCGGATTTGATCCTCGGAGTCTGCGGATGTATGTCCC 442
BSNT_02749___ 443 AAGAGGAATCAGTCGTGAACCGTATTTTGAAAAAACATCCGTTTGTCGAT 492
|.||.|||||||||||.|||||.|||||.||.|||||||||||.||||||
BL03660___ymc 443 AGGAAGAATCAGTCGTCAACCGGATTTTAAAGAAACATCCGTTCGTCGAT 492
BSNT_02749___ 493 ATGATTTTCGGAACGCATAACATTCATCGCCTGCCGGAGCTTTTGTCAGA 542
.||||||||||.||.||.||.||.||.|||.||||.||.|||||||||||
BL03660___ymc 493 CTGATTTTCGGTACACACAATATCCACCGCTTGCCCGAACTTTTGTCAGA 542
BSNT_02749___ 543 AGCATACCTTTCAAAAGAAATGGTTGTAGAAGTTTGGTCTAAGGAAGGGG 592
.||.||.||.||||||||||||||..|.|||||.||||||||.|||||.|
BL03660___ymc 543 GGCTTATCTGTCAAAAGAAATGGTCATCGAAGTGTGGTCTAAAGAAGGCG 592
BSNT_02749___ 593 ACGTTATTGAAAACCTTCCGAAAGTCCGAAATGGAAAAATTAAGGGCTGG 642
|.||.|||||||||||||||||||||||.|..||.||||||||.||||||
BL03660___ymc 593 ATGTCATTGAAAACCTTCCGAAAGTCCGCACCGGCAAAATTAAAGGCTGG 642
BSNT_02749___ 643 GTCAATATCATGTACGGCTGTGACAAATTCTGTACGTATTGCATTGTGCC 692
|||||.||||||||||||||.|||||.|||||||||||.|||||.|||||
BL03660___ymc 643 GTCAACATCATGTACGGCTGCGACAAGTTCTGTACGTACTGCATCGTGCC 692
BSNT_02749___ 693 TTACACACGCGGAAAAGAAAGAAGCCGCCGCCCTGAGGATATCATTCAGG 742
.||||||.|.|||||||||.|||||.|.||.|||||.||.|||||.||||
BL03660___ymc 693 GTACACAAGAGGAAAAGAACGAAGCAGACGTCCTGAAGACATCATCCAGG 742
BSNT_02749___ 743 AAGTGAGAAGGCTTGCAAGTGAAGGCTATAAGGAAATTACACTGTTAGGC 792
||||||||||||||||...|||||||||.||.|||||.||.||..|.||.
BL03660___ymc 743 AAGTGAGAAGGCTTGCGGCTGAAGGCTACAAAGAAATCACGCTTCTCGGA 792
BSNT_02749___ 793 CAAAATGTAAACGCGTATGGAAAAGACTTTGAAGATATGACTTACGGACT 842
||.||.||.|||||.||.||.|||||.|||||.||||||...||||||||
BL03660___ymc 793 CAGAACGTCAACGCCTACGGCAAAGATTTTGAGGATATGGAATACGGACT 842
BSNT_02749___ 843 TGGTGATTTGATGGATGAACTGAGAAAAATCGATATCCCGAGAATCCGTT 892
.||..|.||||||||||||||..|.||||||||.||.|||.|||||||.|
BL03660___ymc 843 CGGCCACTTGATGGATGAACTCCGCAAAATCGACATTCCGCGAATCCGCT 892
BSNT_02749___ 893 TTACAACGAGTCATCCGCGCGACTTTGACGACCGCCTCATTGAAGTGCTT 942
|.||.||.||.|||||||||||.||||||||||..||.||.||.|||||.
BL03660___ymc 893 TCACGACAAGCCATCCGCGCGATTTTGACGACCATCTGATCGAGGTGCTC 942
BSNT_02749___ 943 GCAAAAGGCGGAAATCTGCTTGATCACATTCATCTTCCGGTTCAATCAGG 992
||||||||||||||.||.||.||.|||||.|||||.||.||.||.||.||
BL03660___ymc 943 GCAAAAGGCGGAAACCTTCTGGACCACATCCATCTGCCTGTCCAGTCCGG 992
BSNT_02749___ 993 AAGCTCAGAAGTTCTGAAGCTGATGGCCCGCAAATATGACAGAGAGCGTT 1042
||||||.||.||..||||.||||||||.||||||||.|||.|.|||||.|
BL03660___ymc 993 AAGCTCGGATGTCTTGAAACTGATGGCGCGCAAATACGACCGGGAGCGCT 1042
BSNT_02749___ 1043 ACATGGAGCTGGT-GCGAAAAATAAAGACAGCGATGCCAAACGCTTCTTT 1091
|..|.|||||.|| ||.||||.|||| |.|||||||||.|||||.||.||
BL03660___ymc 1043 ATCTTGAGCTTGTCGCCAAAATTAAA-AAAGCGATGCCGAACGCATCCTT 1091
BSNT_02749___ 1092 GACAACGGACATTATCGTCGGATTTCCAAATGAAACGGACGAACAGTTTG 1141
.||||||||||||||||||||.||.||.||.|||||.|||||.||.||||
BL03660___ymc 1092 AACAACGGACATTATCGTCGGCTTCCCGAACGAAACAGACGAGCAATTTG 1141
BSNT_02749___ 1142 AAGAAACGCTTTCTCTATACCGTGAAGTGGAGTTTGACAGCGCCTATACG 1191
||||||||||.|||.|||||.|.||.||.||.||||||||||||||||||
BL03660___ymc 1142 AAGAAACGCTCTCTTTATACAGAGAGGTTGAATTTGACAGCGCCTATACG 1191
BSNT_02749___ 1192 TTCATTTACTCTCCGCGTGAGGGCACTCCGGCTGCTAAGATGAAAGATAA 1241
|||||.|||||.||.||.||.||.||.||.|||||.||.||||||||.||
BL03660___ymc 1192 TTCATCTACTCGCCTCGCGAAGGAACGCCTGCTGCCAAAATGAAAGACAA 1241
BSNT_02749___ 1242 TGTACCGATGCGTGTGAAAAAAGAACGCCTGCAGCGTCTAAACGCACTGG 1291
|||.||||||||.||||||||||||||.||.|||||..||||.|.|.|||
BL03660___ymc 1242 TGTTCCGATGCGCGTGAAAAAAGAACGGCTTCAGCGGTTAAATGAAGTGG 1291
BSNT_02749___ 1292 TGAATGAAATTTCTGCTAAAAAAATGAAGGAATACGAAGGCAAGGTTGTC 1341
|.||.||||||||.||.||.||||||||||||||.||.||..||||||||
BL03660___ymc 1292 TCAACGAAATTTCCGCGAAGAAAATGAAGGAATATGAGGGGCAGGTTGTC 1341
BSNT_02749___ 1342 GAAGTATTAGTTGAGGGTGAAAGCAAAAATAACCCTGATATTCTTGCCGG 1391
|||||.|||||.|||||||||||.|||||.|||||||||||.||||||||
BL03660___ymc 1342 GAAGTGTTAGTAGAGGGTGAAAGTAAAAACAACCCTGATATCCTTGCCGG 1391
BSNT_02749___ 1392 CTAT--ACGGAAAAAAGCAAGCTTGTCAATTTCAAAGGGCCGAAGGAAGC 1439
|||| ||||||||| ||||||||||||.||||||||.||.||.|||||
BL03660___ymc 1392 CTATACACGGAAAAA--CAAGCTTGTCAACTTCAAAGGACCAAAAGAAGC 1439
BSNT_02749___ 1440 CATCGGCAAAATCGTCCGCGTGAAAATCCAGCAAGCGAAAACATGGTCGC 1489
.||||||.|..|.|||..||||||||||||.||.||||||||.|||||||
BL03660___ymc 1440 GATCGGCCAGCTTGTCAACGTGAAAATCCACCAGGCGAAAACTTGGTCGC 1489
BSNT_02749___ 1490 TTGACGGAGAAATGGTAGGAGAAGCAATCGAGGTGAAATAA 1530
|||||||.|||||||||||||||||||||||||||||.|||
BL03660___ymc 1490 TTGACGGGGAAATGGTAGGAGAAGCAATCGAGGTGAAGTAA 1530
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