Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02748 and BL03659
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02748___kbl.1.5803.seq
# -bsequence dna-align/BL03659___kbl.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02748___kbl-BL03659___kbl.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02748___kbl-BL03659___kbl.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02748___kbl
# 2: BL03659___kbl
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1205
# Identity: 841/1205 (69.8%)
# Similarity: 841/1205 (69.8%)
# Gaps: 55/1205 ( 4.6%)
# Score: 2770.5
#
#
#=======================================
BSNT_02748___ 1 ATGACAAAGGAATTTGAGTTTTTAAAAGCAGAGCTTGATAGTATGAAAGA 50
||| ||.|||||..|.||||||....|.||||||.|||..||||||||
BL03659___kbl 1 ATG---AAAGAATTCAATTTTTTAGCTTCCGAGCTTAATACAATGAAAGA 47
BSNT_02748___ 51 AAACCATACATGGCAAGACATAAAACAGC------TTGAATCTATGCAGG 94
||||...||.|..|||| |.|.|| |.|||||.|||||.|
BL03659___kbl 48 AAACGGAACTTTTCAAG------AGCTGCCGATCATCGAATCAATGCAAG 91
BSNT_02748___ 95 GCCCATTTGTCACAGTGAATCACCA--AAAAGTCATT---CAGCTATCTT 139
|..||...||||.|.|||| | |||||.|||| |||||.||.|
BL03659___kbl 92 GATCAACCGTCAAAATGAA-----AGGAAAAGACATTATACAGCTTTCAT 136
BSNT_02748___ 140 CTAATAATTACCTCGGATTCACTTCACATCCTAGACTCATCAACGCCGCA 189
|.|||||.||.|||||..|.||.||.|||||..|.|||...||.||.||.
BL03659___kbl 137 CCAATAACTATCTCGGGCTGACGTCTCATCCGCGCCTCCAAAAAGCGGCC 186
BSNT_02748___ 190 CAGGAGGCCGTTCAGCAGTATGGAGCCGGCACCGGATCAGTGAGAACGAT 239
.|.|||||.||..|.|.|||.|||||.||.||||||||.||..|.||.||
BL03659___kbl 187 GAAGAGGCGGTCAAACGGTACGGAGCTGGAACCGGATCGGTCCGTACAAT 236
BSNT_02748___ 240 TGCCGGTACATTTACAATGCATCAAGAGCTTGAGAAAAAGCTGGCAGCCT 289
.|||||.|||||.||.||||||.|.|||||.||.||.|||||.||..|.|
BL03659___kbl 237 AGCCGGAACATTCACCATGCATGATGAGCTCGAAAAGAAGCTTGCTTCAT 286
BSNT_02748___ 290 TTAAAAAAACGGAGGCGGCACTTGTATTCCAATCAGGCTTCACAACAAAC 339
|||||||.||.||.||||||||.||||||||.||.||.||.||..||||.
BL03659___kbl 287 TTAAAAACACTGAAGCGGCACTCGTATTCCAGTCCGGATTTACCGCAAAT 336
BSNT_02748___ 340 CAAGGCGTACTTTCAAGTATTCTATCAAAAGAGGATATTGTCATCTCAGA 389
||||||.|.||||||||.|||||..|.|||||.|||.||||.||||||||
BL03659___kbl 337 CAAGGCATTCTTTCAAGCATTCTCACCAAAGATGATCTTGTTATCTCAGA 386
BSNT_02748___ 390 TGAATTGAACCATGCCTCTATTATTGACGGAATTCGACTGACAAAGGCGG 439
.|||||.||||||||.||.||.||||||||.||..||||.||.||.||||
BL03659___kbl 387 CGAATTAAACCATGCTTCCATCATTGACGGCATCAGACTCACCAAAGCGG 436
BSNT_02748___ 440 ATAAAAAGGTGTATCAGCACGTCAATATGAGTGATTTAGAGCGGGTGCTG 489
..|||||.||.||||||||.|...|.|||...||||||||...|.|..||
BL03659___kbl 437 GCAAAAAAGTATATCAGCATGCGGACATGGAAGATTTAGAAAAGATTTTG 486
BSNT_02748___ 490 AGAAAGTCAATGAATTATCGGATGCGTCTGATTGTGACAGACGGCGTATT 539
|.||||||.|||||.||..|.|||||.||.||.||.|||||||||||.||
BL03659___kbl 487 AAAAAGTCGATGAACTACAGAATGCGCCTTATCGTTACAGACGGCGTGTT 536
BSNT_02748___ 540 TTCCATGGATGGCAACATAGCTCCTCTGCCTGATATTGTAGAGCTCGCTG 589
|||.|||||.||..||||.||.||.|||||.||.||.||...||||||||
BL03659___kbl 537 TTCGATGGACGGAGACATCGCGCCGCTGCCCGAAATCGTCCGGCTCGCTG 586
BSNT_02748___ 590 AGAAATATGACGCATTTGTGATGGTGGATGACGCCCATGCATCCGGAGTA 639
|..|.||||||||||||||.|||||.||.|||||.||.||.|||||.||.
BL03659___kbl 587 AACAGTATGACGCATTTGTCATGGTCGACGACGCGCACGCGTCCGGCGTT 636
BSNT_02748___ 640 CTTGGCGAAAACGGCAGGGGAACGGTGAATCACTTCGGTCTTGACGGCAG 689
||.|||||||||||..|.||||||||..|.||.|||||.||.|||||.|.
BL03659___kbl 637 CTCGGCGAAAACGGGCGCGGAACGGTTCACCATTTCGGGCTGGACGGGAA 686
BSNT_02748___ 690 AGTTCATATTCAGGTCGGAACATTAAGCAAGGCAATCGGAGTGCTCGGCG 739
.|||||.|||||.|||||.|||.|.||||||||.|||||.||..|.||.|
BL03659___kbl 687 GGTTCACATTCAAGTCGGCACACTCAGCAAGGCGATCGGCGTATTAGGAG 736
BSNT_02748___ 740 GCTACGCTGCAGGTTCAAAGGTGCTGATCGATTATTTGCGCCATAAAGGC 789
||||.||.||.||.||.||||||||||||||.||.||....||||||||.
BL03659___kbl 737 GCTATGCGGCCGGATCCAAGGTGCTGATCGACTACTTAAAGCATAAAGGA 786
BSNT_02748___ 790 CGTCCATTTTTATTCAGCACATCTCATCCGCCGGCTGTCACTGCAGCTTG 839
.|.||.|||.|.|||||.||.||.|||||||||||.||||||||.||.||
BL03659___kbl 787 AGACCGTTTCTCTTCAGTACTTCCCATCCGCCGGCCGTCACTGCGGCATG 836
BSNT_02748___ 840 TATGGAAGCGATTGATGTCTTGCTTGAAGAGCCGGAGCATATG----GAG 885
.||.||||||.|..||||..||.|.||.||.|| ..||| || .|.
BL03659___kbl 837 CATTGAAGCGGTCAATGTGCTGATGGAGGAACC--TTCAT-TGATTAAAA 883
BSNT_02748___ 886 CGCTTGTGGGAGAATACTGCCTATTTTAAAGCAATGCTTGTGAAAATGGG 935
.|||| |||||.|||||.||.||.||.|||..|..|||||..|||||.||
BL03659___kbl 884 AGCTT-TGGGACAATACCGCGTACTTCAAAAAAGAGCTTGAAAAAATCGG 932
BSNT_02748___ 936 TTTGACTCTCACAGAGAGTCAAACGCCGATTCTTCCTATTTTAATAGGTG 985
..|..|.||.|...||||..|||||||||||...||.|||||.||.||||
BL03659___kbl 933 CCTTCCGCTGATTAAGAGCGAAACGCCGATTACGCCGATTTTGATCGGTG 982
BSNT_02748___ 986 ATGAAGGTGTGGCAAAGCAATTTTCAGATCA-GCTCCTTT----CTCACG 1030
||||||.||.||||...|..||.||| |.|| ||| ||| || ||
BL03659___kbl 983 ATGAAGCTGAGGCATGCCGCTTCTCA-AACACGCT--TTTTGAGCT--CG 1027
BSNT_02748___ 1031 GTGTTTTTGCCCAAAGTATCATTTTCCCGACTGTAGCAAAGGGAAAAGCC 1080
||.|.||||||||....||..|.||.|||||.||..|.||.||.|||||.
BL03659___kbl 1028 GTTTATTTGCCCAGGCCATTGTATTTCCGACCGTCCCGAAAGGCAAAGCG 1077
BSNT_02748___ 1081 AGAATTCGCACGATTATAACAGCAGAGCACACCAAAGATGAACTGGATCA 1130
.|.||..|.|||||.||.||.||..||||..|.|||||.||.||.|||.|
BL03659___kbl 1078 CGGATCAGAACGATCATGACCGCCCAGCATTCGAAAGAAGAGCTCGATAA 1127
BSNT_02748___ 1131 GGCGCTTGATGTCATCGAAAAGACGGC------AAAGGAGCTCCAGCTAT 1174
.||||||||..||||..||| .|||| ||||..|.| ||..
BL03659___kbl 1128 AGCGCTTGAAATCATTCAAA--CCGGCGCTAAAAAAGCGGGT----CTGC 1171
BSNT_02748___ 1175 TGTAA 1179
|.|||
BL03659___kbl 1172 TTTAA 1176
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