Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02745 and BL03654

See Amino acid alignment / Visit BSNT_02745 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence dna-align/BSNT_02745___spoVS.1.5803.seq
#    -bsequence dna-align/BL03654___spoVS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02745___spoVS-BL03654___spoVS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02745___spoVS-BL03654___spoVS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02745___spoVS
# 2: BL03654___spoVS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     219/261 (83.9%)
# Similarity:   219/261 (83.9%)
# Gaps:           0/261 ( 0.0%)
# Score: 927.0
# 
#
#=======================================

BSNT_02745___      1 ATGGAAATCTTAAAAGTTTCAGCAAAATCGAGTCCAAATTCAGTGGCAGG     50
                     ||||||||.|||||.||||||||||||||.|.||||||.||.||.|||||
BL03654___spo      1 ATGGAAATATTAAAGGTTTCAGCAAAATCAAATCCAAACTCGGTCGCAGG     50

BSNT_02745___     51 TGCGCTTGCAGGCGTGTTGAGAGAGCGAGGAGCCGCCGAGATTCAAGCGA    100
                     ||||||.|||||.||.|||||.||.|||||.||.||.||.||||||||.|
BL03654___spo     51 TGCGCTCGCAGGAGTCTTGAGGGAACGAGGGGCTGCAGAAATTCAAGCAA    100

BSNT_02745___    101 TCGGAGCGGGTGCATTAAACCAGGCTGTAAAAGCTGTGGCGATTGCCAGG    150
                     |||||||.||.||||||||.||||||||.|||||.||.||||||||..||
BL03654___spo    101 TCGGAGCTGGGGCATTAAATCAGGCTGTTAAAGCGGTAGCGATTGCACGG    150

BSNT_02745___    151 GGATTTGTGGCGCCTAGCGGCGTTGATTTGATTTGTATTCCGGCTTTTAC    200
                     ||||||||.|||||.|||||.||.|||.|||||||.||||||||.|||||
BL03654___spo    151 GGATTTGTAGCGCCGAGCGGAGTCGATCTGATTTGCATTCCGGCGTTTAC    200

BSNT_02745___    201 AGATATTCAAATCGATGGGGAAGAAAGAACAGCGATTAAATTAATCGTGG    250
                     .||.||||||||.||.||.||||||.|||||||||||||..|||||||.|
BL03654___spo    201 GGACATTCAAATTGACGGTGAAGAACGAACAGCGATTAAGCTAATCGTAG    250

BSNT_02745___    251 AGCCTCGCTAA    261
                     |||||||||.|
BL03654___spo    251 AGCCTCGCTGA    261


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