Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02346 and BL03648

See Amino acid alignment / Visit BSNT_02346 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence dna-align/BSNT_02346.1.5803.seq
#    -bsequence dna-align/BL03648.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02346-BL03648.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02346-BL03648.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02346
# 2: BL03648
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     103/177 (58.2%)
# Similarity:   103/177 (58.2%)
# Gaps:          36/177 (20.3%)
# Score: 259.5
# 
#
#=======================================

BSNT_02346         1 ATGGGTACCTTAGTAATATTTAAAGAAAACGAAATGACTGTTTTAGAGGA     50
                     |||||.||..|.|||....|||||.|..|.||||||||..|||||||.||
BL03648            1 ATGGGAACAATTGTAGCGATTAAAAATCATGAAATGACCATTTTAGAAGA     50

BSNT_02346        51 TATCAGTGAAGAAAC--------TTAC-CTGAATATG---AAGAAAGAAT     88
                     ..||||        |        |||| |.||| |||   |||.|||..|
BL03648           51 GGTCAG--------CCGGGCCGTTTACACAGAA-ATGCTCAAGGAAGCTT     91

BSNT_02346        89 CAGCTGACCTTCAAGAAGAGCATCCTCCGTATCTGATT---TGGCACGAA    135
                     ||   |||..|.|||||.|        ..|||.| |||   |||.|.|||
BL03648           92 CA---GACAGTGAAGAACA--------AATATAT-ATTTCGTGGAAAGAA    129

BSNT_02346       136 GACCTTCATTTTGATTATGGCTATTAA    162
                     ||..||.|.|..|||||.|||||.|||
BL03648          130 GATTTTGACTCCGATTACGGCTACTAA    156


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