Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02346 and BL03648
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence dna-align/BSNT_02346.1.5803.seq
# -bsequence dna-align/BL03648.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02346-BL03648.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02346-BL03648.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02346
# 2: BL03648
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 103/177 (58.2%)
# Similarity: 103/177 (58.2%)
# Gaps: 36/177 (20.3%)
# Score: 259.5
#
#
#=======================================
BSNT_02346 1 ATGGGTACCTTAGTAATATTTAAAGAAAACGAAATGACTGTTTTAGAGGA 50
|||||.||..|.|||....|||||.|..|.||||||||..|||||||.||
BL03648 1 ATGGGAACAATTGTAGCGATTAAAAATCATGAAATGACCATTTTAGAAGA 50
BSNT_02346 51 TATCAGTGAAGAAAC--------TTAC-CTGAATATG---AAGAAAGAAT 88
..|||| | |||| |.||| ||| |||.|||..|
BL03648 51 GGTCAG--------CCGGGCCGTTTACACAGAA-ATGCTCAAGGAAGCTT 91
BSNT_02346 89 CAGCTGACCTTCAAGAAGAGCATCCTCCGTATCTGATT---TGGCACGAA 135
|| |||..|.|||||.| ..|||.| ||| |||.|.|||
BL03648 92 CA---GACAGTGAAGAACA--------AATATAT-ATTTCGTGGAAAGAA 129
BSNT_02346 136 GACCTTCATTTTGATTATGGCTATTAA 162
||..||.|.|..|||||.|||||.|||
BL03648 130 GATTTTGACTCCGATTACGGCTACTAA 156
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