Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02299 and BL03639
See
Amino acid alignment /
Visit
BSNT_02299 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence dna-align/BSNT_02299___motA.1.5803.seq
# -bsequence dna-align/BL03639___motA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02299___motA-BL03639___motA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02299___motA-BL03639___motA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02299___motA
# 2: BL03639___motA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 842
# Identity: 586/842 (69.6%)
# Similarity: 586/842 (69.6%)
# Gaps: 70/842 ( 8.3%)
# Score: 1970.0
#
#
#=======================================
BSNT_02299___ 1 ATGGATAAAACTTCGTTAATCGGTATTATTCTT-GCTTTTGTGGCATTGA 49
|||||.|||||.||||||||.||.||.| |||| |||.|..|.|.|.|..
BL03639___mot 1 ATGGACAAAACATCGTTAATTGGAATCA-TCTTAGCTATCATCGGAGTAG 49
BSNT_02299___ 50 GCGTCGGGATGGTTCTGAAAGGCGTCAG--TTTCAGCGCCCTTGCAAACC 97
|.|||||.|||||..|||||||.||||| .||| ||..||.|..||.|
BL03639___mot 50 GTGTCGGCATGGTCATGAAAGGTGTCAGCCCTTC--CGTTCTCGTCAATC 97
BSNT_02299___ 98 CCGCTGCCAT-TTTAATTATTATCGCCGGGACAATCTCAGCAGTCGTTAT 146
|||| |.||| ..|.||.||..|.|.||||||||||.|||||||.||.||
BL03639___mot 98 CCGC-GGCATGGCTGATCATCCTTGTCGGGACAATCGCAGCAGTTGTGAT 146
BSNT_02299___ 147 TGCGTTCCCAA----CAAAAGAAATTAAAAAAGTGCCTGCGCTGTTTCGA 192
.||.||.|||| | ||..|.|||||.||.||....||.||..|.
BL03639___mot 147 CGCTTTTCCAATCCGC----GAGCTCAAAAAGGTTCCCAAACTCTTCGGC 192
BSNT_02299___ 193 GTGTTATTTAAGGAAAATAAACAGCTCACAATAGAGGAACTCATTCCTAT 242
.|.||.||.||.||.||.||...|.||..|||..|.|||||.||.||.||
BL03639___mot 193 ATCTTGTTCAAAGAGAAGAAGATGATCGAAATCAACGAACTGATCCCGAT 242
BSNT_02299___ 243 GTTCTCTGAATGGGCTCAGCTTGCACGCCGCGAAGGTCTGCTTGCTTTAG 292
|||.||.||.|||||.||..|.|||.|.||||||||.||.||.|||||.|
BL03639___mot 243 GTTTTCCGAGTGGGCGCAAATCGCAAGACGCGAAGGACTTCTCGCTTTGG 292
BSNT_02299___ 293 AAGCAAGCA-TTGAGGATG---TAGATGATGCTTTCTTGAAAAACGGGCT 338
|||||| | |||| ||| |.|||||||..||.|||||||||||..|
BL03639___mot 293 AAGCAA--ATTTGA--ATGAGATCGATGATGAATTTTTGAAAAACGGCAT 338
BSNT_02299___ 339 CAGCATGGCTGTTGACGGGCAAAGCGCGGAATTTATCAGAGATATTATGA 388
.||||||||.||||||||.|||||.||.||.||||||||.||..||.|.|
BL03639___mot 339 GAGCATGGCGGTTGACGGTCAAAGTGCCGATTTTATCAGGGACGTTTTAA 388
BSNT_02299___ 389 CAGAGGAAGTCGAAGCAATGGAGGACAGGCACCAAGCCGGAGCCGCTATT 438
|.||.|||||.|||||||||||.||.|||||.||||.||||||.|.||||
BL03639___mot 389 CTGAAGAAGTTGAAGCAATGGAAGAAAGGCATCAAGTCGGAGCGGGTATT 438
BSNT_02299___ 439 TTTACACAAGCGGGAACGTACGCCCCGACACTTGGAGTACTCGGTGCTGT 488
|||||.||.||.||.||.||.||.||||||||.||.||..|.||.|||||
BL03639___mot 439 TTTACCCAGGCAGGCACATATGCGCCGACACTCGGCGTTTTGGGCGCTGT 488
BSNT_02299___ 489 AATCGGGCTGATTGCCGCTCTCTCTCATATGGATAACACAGATGAGCTTG 538
..||||.|||||.|||||.||..|..|||||....|||||||.|.|||||
BL03639___mot 489 TGTCGGACTGATCGCCGCACTTGCGGATATGAGCGACACAGAAGCGCTTG 538
BSNT_02299___ 539 GACACGCCATCAGTGCCGCCTTTGTTGCCACACTTCTCGGTATCTTTACA 588
||||.||.|||||.|||||||||||.|||||.||||||||.|||||.||.
BL03639___mot 539 GACATGCGATCAGCGCCGCCTTTGTCGCCACCCTTCTCGGGATCTTCACC 588
BSNT_02299___ 589 GGGTATGTGTTATGGCATCCTTTCGCAAATAAATTAAAACGAAAATCAAA 638
||.|||||..|||||||||||||.||.|||||||||||.||.|||||.||
BL03639___mot 589 GGATATGTACTATGGCATCCTTTTGCCAATAAATTAAAGCGGAAATCCAA 638
BSNT_02299___ 639 ACAAGAAGTAAAACTGCGTGAGGTCATGATTGAAGGTGTTTTATCCGTT- 687
|||.|||||.|||.|.||.||.||.||||||||||| .||||.||
BL03639___mot 639 ACAGGAAGTCAAAGTCCGCGAAGTTATGATTGAAGG-----CATCCTTTC 683
BSNT_02299___ 688 ----TTAGAAGGACAAGCACCGAAAGTCATCGAACAAAAGCTTTTAATGT 733
||.|||||.||.||.||.||||||||.||||||||||||||.||||
BL03639___mot 684 GATCTTGGAAGGCCAGGCTCCAAAAGTCATTGAACAAAAGCTTTTGATGT 733
BSNT_02299___ 734 ATCTTCCTGCGAAG-GACCGCTTGAAATTTG------CAGA-----ACAA 771
|..||.|| |.||| ||.||||..|...|.| |||| ||||
BL03639___mot 734 ACGTTTCT-CCAAGCGAACGCTCCAGCATCGTCATCCCAGATGGAGACAA 782
BSNT_02299___ 772 ---GGAGAGGCGCAAAATGGCGAGAAAAAAGAAGAAGCATGA 810
|||.||..|| ||||||.||
BL03639___mot 783 AGGGGACAGCAGC--AATGGCTAG------------------ 804
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.