Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02298 and BL03638

See Amino acid alignment / Visit BSNT_02298 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence dna-align/BSNT_02298___motB.1.5803.seq
#    -bsequence dna-align/BL03638___motB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02298___motB-BL03638___motB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02298___motB-BL03638___motB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02298___motB
# 2: BL03638___motB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 817
# Identity:     558/817 (68.3%)
# Similarity:   558/817 (68.3%)
# Gaps:          71/817 ( 8.7%)
# Score: 1748.5
# 
#
#=======================================

BSNT_02298___      1 ATGGCGAGAAAAAAGAAG-------AAG--CATGAGGACGAGCAAGTTGA     41
                     |||||.||||||||||||       |||  |||   ||.||.||.||.||
BL03638___mot      1 ATGGCTAGAAAAAAGAAGCACAAAAAAGACCAT---GAAGAACACGTGGA     47

BSNT_02298___     42 TGAATCATGGCTCGTTCCTTACGCCGACATCCTTACTCTTCTCCTGGCAT     91
                     |||.||.||||||.|.||.||.||.|||.|.||.||.||.||..||||..
BL03638___mot     48 TGAGTCTTGGCTCATCCCATATGCAGACTTGCTGACACTGCTTTTGGCCC     97

BSNT_02298___     92 TGTTTATTGTGCTGTACGCGAGCAGCTCGATTGACGC--AGCTAAGTTTC    139
                     ||||.||.||.||||..||.|..||||||||.|||||  ||  |||||..
BL03638___mot     98 TGTTCATCGTACTGTTTGCCATGAGCTCGATCGACGCCAAG--AAGTTCG    145

BSNT_02298___    140 AAATGCTCTCAAAATCATTTAATGAAGTTTTTACAGGCGGCACCGGTGTA    189
                     |.|||||.||||||||||||||||..||.|||||.|||||.||.||..|.
BL03638___mot    146 ATATGCTGTCAAAATCATTTAATGCCGTATTTACCGGCGGAACAGGAATG    195

BSNT_02298___    190 CTGGACTACTCCAGTGTCACTCCTCCTGAAAACGAGTCAGACGGCATCGA    239
                     .||||.||.|||||..|||| |...|.||||||||| ||.|    |.|||
BL03638___mot    196 ATGGATTATTCCAGCTTCAC-CGAGCCGAAAACGAG-CACA----ACCGA    239

BSNT_02298___    240 TGAAGTGAAAAAG----GAAAAAGAAGAGAAAGA-------GAAAAACAA    278
                     .||.| |||||||    ||..|.|.|   |||||       |||...|||
BL03638___mot    240 AGATG-GAAAAAGCCCTGACCAGGCA---AAAGATCTCTCCGAAGCTCAA    285

BSNT_02298___    279 GAAAGAAAAAGAAAAAGCA---GCTGATCAAGAAGAACTTGAAAATGTGA    325
                      |||||||||| |.|||||   |||||        ||    ||||| |.|
BL03638___mot    286 -AAAGAAAAAG-ACAAGCAGTCGCTGA--------AA----AAAAT-TCA    320

BSNT_02298___    326 AGAGCCAGGTGGAAAAGTTCATCAAAGATAAAAAGCTGGAACATCAGCTG    375
                     .||| |||||..|...|||.||.|||||.||.||.||..||.|.|||.|.
BL03638___mot    321 GGAG-CAGGTCAACCGGTTTATTAAAGAGAAGAATCTTCAAAAACAGGTC    369

BSNT_02298___    376 GAGACGAAGATGACTAG-TGAAGGCCTTCTGATTACGATTAAAGACAGCA    424
                     .|.||||||.|||| || .||.|||||.||..||.|.||..|.||.|..|
BL03638___mot    370 AATACGAAGCTGAC-AGACGAGGGCCTCCTCCTTTCCATCGAGGATAATA    418

BSNT_02298___    425 TCTTCTTTGATTCTGGAAAAGCGACCATCCGTAAGGAAGATGTGCCGCTT    474
                     ||||.||.|||||.|||||||||...|||||..||.|.||..|.|||||.
BL03638___mot    419 TCTTTTTCGATTCCGGAAAAGCGGAGATCCGCCAGCAGGACATTCCGCTG    468

BSNT_02298___    475 GCAAAAGAGATTTCAAATCTTCTTGTGATT-AACCCGCCAAGAAATATCA    523
                     ||.||.||..|.||..|.|||||.|| ||| ||||||||..|.||||||.
BL03638___mot    469 GCCAAGGAAGTATCCGACCTTCTCGT-ATTGAACCCGCCCCGCAATATCG    517

BSNT_02298___    524 TTATCAGCGGACATACTGATAATATGCCAATTAAAAATTCTGAATTCCAA    573
                     |.||||||||.|||||.||.|||.||||.|||..|||||||.||||..||
BL03638___mot    518 TAATCAGCGGGCATACGGACAATGTGCCGATTCGAAATTCTCAATTTAAA    567

BSNT_02298___    574 TCAAACTGGCATTTAAGCGTCATGAGAGCGGTAAACTTTATGGGGCTCCT    623
                     |||||.||||||||||||||.|||.|.||.||.||.||.||||||||..|
BL03638___mot    568 TCAAATTGGCATTTAAGCGTGATGCGGGCTGTCAATTTCATGGGGCTTTT    617

BSNT_02298___    624 GATTGAAAACCCCAAGCTCGATGCAAAAGTGTTCAGCGCCAAGGGTTATG    673
                     .||.|||||.||.|||||.||.||.||..|.||||||||.||.||.||.|
BL03638___mot    618 AATCGAAAATCCAAAGCTTGACGCCAAGATCTTCAGCGCGAAAGGCTACG    667

BSNT_02298___    674 GCGAGTATAAACCGGTGGCTTCCAACAAAACTGCGGAAGGCCGAAGCAAA    723
                     |.||.|.|||||||.|.|||||.||..|.||.|..|||||..||||.|||
BL03638___mot    668 GGGAATTTAAACCGATCGCTTCAAATGACACCGAAGAAGGAAGAAGAAAA    717

BSNT_02298___    724 AACCGGCGGGTTGAAGTTCTCATTTTGCCGAGAGGCGCAGCGGAAACAAA    773
                     |||.|.||.||||||.|.||.||..||||||..||| ||  ||||| |..
BL03638___mot    718 AACAGACGCGTTGAAATCCTTATCCTGCCGATCGGC-CA--GGAAA-ATC    763

BSNT_02298___    774 TGA--AAAATAG-----    783
                     |||  ||||.||     
BL03638___mot    764 TGAATAAAAAAGAATAA    780


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02298 and BL03638

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
