Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02294 and BL03637
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence dna-align/BSNT_02294___kinD.1.5803.seq
# -bsequence dna-align/BL03637___kinD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02294___kinD-BL03637___kinD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02294___kinD-BL03637___kinD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02294___kinD
# 2: BL03637___kinD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1647
# Identity: 1007/1647 (61.1%)
# Similarity: 1007/1647 (61.1%)
# Gaps: 279/1647 (16.9%)
# Score: 2884.0
#
#
#=======================================
BSNT_02294___ 1 ---------TTGAAAA-TACTAAAAGGCGCCTGCGGGAGAGTCAAACTTT 40
||||||| || || ||...||.|.|||..||||
BL03637___kin 1 ATGCGCAATTTGAAAAGTA-TA---------TGGAAGAAAATCAGGCTTT 40
BSNT_02294___ 41 ATATCATACTGGTCGTGATTCCGGCAATCGTCATCAGCTTTTTCGTATAT 90
||.|.||..||||..||||.||.||..||.|.||.||||||||.|||||.
BL03637___kin 41 ATTTGATCTTGGTGATGATCCCCGCCTTCATTATAAGCTTTTTTGTATAC 90
BSNT_02294___ 91 GAAAAAGAAAAAGATACAATAGCTGCAGAACATAAACA-----AGA-AGC 134
|||.|||||..|||.|..||..||| |.||.|| ||| .||
BL03637___kin 91 GAACAAGAACGAGAAAATATCACTG------AAAAGCACCGTCAGACTGC 134
BSNT_02294___ 135 AAGTGTCCTGCTAAACCTTCACCGCAACAAAATCAATTATTTAATCGGAG 184
.|.|.||.||||.||..|||||||||||.||||||||||..|.|||||.|
BL03637___kin 135 GACTCTCATGCTCAATATTCACCGCAACCAAATCAATTACCTGATCGGCG 184
BSNT_02294___ 185 AAACAATGGCGAGAATGACCT-CCTTGTCCATCGCCATCGACAGACCGGT 233
|||||...||.||..|.|.|| ||||| |||..|||.||.||...||.||
BL03637___kin 185 AAACAGAAGCAAGGCTCAGCTCCCTTG-CCACGGCCCTCAACCACCCTGT 233
BSNT_02294___ 234 T---------GATATAAAGAAAATGCAGTCAATTTTGGAAAAGACCTTTG 274
| .||||.||...|||.|.|.| |||| ||.|.|.
BL03637___kin 234 TAATGAGCAGCATATCAAACGAATCCTGAC------GGAA---ACGTATA 274
BSNT_02294___ 275 ATTCAGAGCCGAGATTTTCCGGTCTCTATTTTCTCAATGCCAAAGGAGAC 324
|...|||.|||.|.|||||.|.|.|.||..||.|.||||...|.||.||.
BL03637___kin 275 AAAAAGAACCGCGTTTTTCGGCTTTATACCTTTTAAATGAAGACGGCGAT 324
BSNT_02294___ 325 GTCACCGCAAGCA---CAACCGAATTAAAAACGAAAGTAAACCTGGC-CG 370
||||..|..|||| |..||| |.||||.|||...||| |
BL03637___kin 325 GTCATGGTGAGCACGTCTCCCG---------CCAAAGAAAAAAAGGCGC- 364
BSNT_02294___ 371 ACAGATCTTTTTTTACAAAAGC---------AAA--GGAAACTAA--AAA 407
|||.||||||.||| ||| ||||| || |||
BL03637___kin 365 --------TTTCTTACAAGAGCATTCTGCAAAAAGCGGAAA--AATCAAA 404
BSNT_02294___ 408 GA---CAGTCATTTCAGATAGTTAT--------------------TCGAG 434
|| |.||.||..|||| .|.||| |.|||
BL03637___kin 405 GAAATCCGTGATCACAGA-CGATATACATACAGTGTCGGACGGGCTGGAG 453
BSNT_02294___ 435 CAGAATTACTGGTCAGCCAATTTTCACAATTTGTGTCC-CTGTTTCGGAC 483
|.|||| |||||.|| ||| .|.||| |||
BL03637___kin 454 CTGAAT-------------ATTTTTAC--------TCCGGTCTTT--GAC 480
BSNT_02294___ 484 TCAAAACGTAATGTG----ACAGATTATCTTGTCGCAGCTATTCAAATTG 529
|.||.|..|.| |||.|||.|||..||||..|.||.|...|.|
BL03637___kin 481 ----AGCGAAGGGAGAACAACAAATTTTCTGCTCGCTTCGATCCGCGTCG 526
BSNT_02294___ 530 ATTATTTGAAAAATCTCATTAACTTGCTGAGCCCTGATGTTTATATTGAA 579
|||||.||||||||.||||.|||.|..||||||||||..|||||||..||
BL03637___kin 527 ATTATCTGAAAAATATCATGAACGTCTTGAGCCCTGAGCTTTATATCAAA 576
BSNT_02294___ 580 GTTGTGAACCAAGACGGGAA-AAT--GAT----TTTTGCGAGCGGACAAG 622
.||.|.||.|| ||| ||| ||| ||| .||| ||.|
BL03637___kin 577 ATTCTCAATCA------GAAGAATCAGATCGTCTTT-----ACGG-CAGG 614
BSNT_02294___ 623 CC--TCTCATGCAGAGGATCAGAA-------ACCTGTCAGCGGATATCTG 663
|| ||||.|.|.|||.|.|.|.| ||| |||..||..|.|.||
BL03637___kin 615 CCATTCTCCTCCTGAGAAGCCGGACGGCGGTACC-GTCGACGCTTTTTTG 663
BSNT_02294___ 664 GATGATATCAGCTGGAATATGAAAGTCTATCCGAACCCGGTCACAATAGA 713
||..|.|||..||||||..|..|||||||||||.|.||||||
BL03637___kin 664 GACCAGATCGACTGGAAGCTTGAAGTCTATCCGGAACCGGTC-------- 705
BSNT_02294___ 714 AGAAC-TGACGAAAAGCCT----AGTGCTTCCGCTTTCAT------GTAT 752
.|.| |||.| |||.|.| ||| ||||.|||.|||| ||||
BL03637___kin 706 -CAGCTTGATG-AAATCGTTCACAGT-CTTCTGCTGTCATTTTTGAGTAT 752
BSNT_02294___ 753 TATTGTTCTGCTGAATATCCTTTTTATT-CTCGTGCT---GTATTATTTG 798
|.|..|||||||||||| ||.|.|| |||.|||| ||||....||
BL03637___kin 753 TTTCATTCTGCTGAATA----TTATGTTCCTCCTGCTCCAGTATGTCCTG 798
BSNT_02294___ 799 CTGAAGCGGCAGACCCAGCTGGAGCGCTCAGAAAACGAGGCGCAAAAATT 848
||||||||||.||||.|||.|||||||.|..||||.||.|||||.||..|
BL03637___kin 799 CTGAAGCGGCGGACCAAGCAGGAGCGCGCCCAAAATGAAGCGCAGAAGCT 848
BSNT_02294___ 849 AGAACTGATCGGGACGCTT-GCTGCCAGCACAGCCCATGAAATCCGTAAC 897
.|||.|.|||||.|| ||| ||.||.|||||.||.|||||||||.|.|||
BL03637___kin 849 CGAATTAATCGGCAC-CTTGGCGGCGAGCACCGCTCATGAAATCAGAAAC 897
BSNT_02294___ 898 CCTCTTACCGGCATAAGCGGCTTTATTCAGCTGTTGCAAAAGAAATATAA 947
||.||.||.|||||.|||||||||||.|||||..|.|||||.||||||.|
BL03637___kin 898 CCGCTGACAGGCATCAGCGGCTTTATCCAGCTCCTTCAAAAAAAATATCA 947
BSNT_02294___ 948 AGGTGAAGAGGATCAGCTTTACTTCTCCATTATCGAACAGGAGATAAAGC 997
|....||||.|||||..|.||.|||||.||.|||||.|||||.||...|.
BL03637___kin 948 ATCAAAAGAAGATCAAATGTATTTCTCAATCATCGACCAGGAAATCCGGA 997
BSNT_02294___ 998 GCATCAATCAAATAGTGAGTGAGTTTCTCGTTCTCGGCAAGCCGACAGCT 1047
|.|||||.||.||.||.||.|||||||||||.|||||.||||||||.||.
BL03637___kin 998 GGATCAACCAGATTGTCAGCGAGTTTCTCGTGCTCGGAAAGCCGACGGCA 1047
BSNT_02294___ 1048 GAAAAATGGGAGCTGAACTCACTTCAGGACATTATCGGAGAAATTATGCC 1097
||..|.|||.||||.|||||..|..|.||.||.||.|..||.||.|||||
BL03637___kin 1048 GAGCAGTGGCAGCTCAACTCCATGAATGAAATGATTGACGAGATCATGCC 1097
BSNT_02294___ 1098 GATCATTTATTCTGAGGGCAATCTATACAATGTTGAAGTCGAATTGCAGT 1147
|||.|||.|||||||||..|||.||||.|||||.|||||.|||||.||..
BL03637___kin 1098 GATTATTCATTCTGAGGCAAATTTATATAATGTGGAAGTGGAATTTCAAG 1147
BSNT_02294___ 1148 ATTTAACCGAGCAG--CC--CTTACTCGTAAAATGTACAAAAGATCATAT 1193
|.| .|.|||.|| || |||| .||..|.||||.|||.||||||||
BL03637___kin 1148 ACT--GCGGAGAAGATCCGGCTTA--TGTGTATTGTAAAAAGGATCATAT 1193
BSNT_02294___ 1194 TAAACAAGTGATTTTAAATGTAGCAAAAAATGGCCTCGAGTCAATGCCTG 1243
|||.||.||..|.||.||.||.||.|||||||..||.||.||.| ||
BL03637___kin 1194 TAAGCAGGTTGTCTTGAACGTCGCCAAAAATGCTCTTGAATCGA----TG 1239
BSNT_02294___ 1244 AA----GGAGGCAAACTAACGATTTCCCTGGGAGCTTTAGATAAAAAAGC 1289
|| ||.||.||.|| ||...||.|.||..||
BL03637___kin 1240 AAAAACGGCGGAAAGCT-------------GGTCATTCAAATCGAA---- 1272
BSNT_02294___ 1290 CATAATCA----AAG----------TTGT---GGATAACGGTGAAGGGAT 1322
|||.|||| ||| |||| |||||.|||.|||||.||
BL03637___kin 1273 CATGATCAAGAGAAGGCGCAAATTATTGTGAAGGATATCGGAGAAGGCAT 1322
BSNT_02294___ 1323 TTCTCAGGAAATGCTGGATCACATCTTCCTTCCCTTTGTTACTTCTAAAG 1372
|.|.||.||||||.||||....||.||||..||.||||||||.||.||||
BL03637___kin 1323 TCCACAAGAAATGATGGAAAGTATTTTCCAGCCTTTTGTTACATCAAAAG 1372
BSNT_02294___ 1373 AAAAAGGAACCGGGCTCGGCCTTGTTGTTTGTAAACGGATCGTGCTGATG 1422
|||||||||||||.|||||||||||.||.||.||.||.|||.|....|||
BL03637___kin 1373 AAAAAGGAACCGGACTCGGCCTTGTCGTGTGCAAGCGCATCATTTCCATG 1422
BSNT_02294___ 1423 TACGGAGGCTCTATTCATATTGAAAGTGAAGTGCGAAGAGGCACAAAGGT 1472
|||||.||..|.||||||||.|||||.|||..||..|.|||.||.|..||
BL03637___kin 1423 TACGGGGGAACCATTCATATCGAAAGCGAACGGCATAAAGGAACGACTGT 1472
BSNT_02294___ 1473 GACAATCACCCTCCCCGTATCCG-CATCATAG--------------- 1503
.||.||.||.|| .||| |.|||.||
BL03637___kin 1473 AACGATTACGCT-------GCCGACTTCAAAGGAACAGGACGACTGA 1512
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