Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02285 and BL03634

See Amino acid alignment / Visit BSNT_02285 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:48
# Commandline: needle
#    -asequence dna-align/BSNT_02285___ykrU.1.5803.seq
#    -bsequence dna-align/BL03634___mtnU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02285___ykrU-BL03634___mtnU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02285___ykrU-BL03634___mtnU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02285___ykrU
# 2: BL03634___mtnU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     555/813 (68.3%)
# Similarity:   555/813 (68.3%)
# Gaps:          66/813 ( 8.1%)
# Score: 1822.0
# 
#
#=======================================

BSNT_02285___      1 ATGAAATGGACGATATCTTGTCTTCAATTTGATATTTCATACGGCAAAAC     50
                     .||||...|||.||.||.||.||.|||||.|||||..|.||||||||..|
BL03634___mtn      1 GTGAAGCTGACAATTTCATGCCTGCAATTCGATATCGCGTACGGCAATCC     50

BSNT_02285___     51 TTCGGAAAATATAAAAAAAGCTGAATTTTTCATCGAAAAAGAAAGCAAAC    100
                     |||.||||||.|.||||||||.||.....|.|||||..|.||||||....
BL03634___mtn     51 TTCTGAAAATTTCAAAAAAGCGGAGCAGCTGATCGAGCAGGAAAGCCGGA    100

BSNT_02285___    101 ATGCTGATGTTCTTGTTCTGCCTGAATTATGGACGACCGGATATGATCTG    150
                     |.||.|||.|.|||.|.||.|||||..|.||||||||.||.||||||.|.
BL03634___mtn    101 AGGCGGATATCCTTCTCCTTCCTGAGCTGTGGACGACGGGTTATGATTTA    150

BSNT_02285___    151 GCCAATCTTGATGAAC--TCGCTGATAAAGACGGCCGCTCCG----CTCA    194
                     ...|||||.|  |..|  ||||.|||.||||.|||.|    |    |..|
BL03634___mtn    151 AAAAATCTCG--GCTCCATCGCGGATGAAGAAGGCAG----GCAAACGAA    194

BSNT_02285___    195 GAGCTGGCTGAAGAAAACGGCAAAA--AAACATGGTGTTCATATTGTCGC    242
                     |||.||||||.||.|||||||||||  ||||  .|..|.|||||.||...
BL03634___mtn    195 GAGATGGCTGCAGGAAACGGCAAAAGCAAAC--CGCATCCATATCGTATG    242

BSNT_02285___    243 CGGATCGGTCGCTGTCAGGAAGAATTCTGATGTTTATAATACAATGTACA    292
                     |||.||.|||||.||||.|||.||....|.|||.||.||||..|||||||
BL03634___mtn    243 CGGCTCAGTCGCAGTCAAGAAAAAAAGCGGTGTGTACAATATCATGTACA    292

BSNT_02285___    293 TCGCGGATAAGGAAGGGCAAATCATTAAAGAGTACAGAAAAGCCCATCTT    342
                     ||||.||.||..|.||.||..|.||.|||||.|||||.|||||.||.|||
BL03634___mtn    293 TCGCAGACAAAAACGGACATTTGATCAAAGAATACAGCAAAGCTCACCTT    342

BSNT_02285___    343 TTTCAGCTGATGGATGAGCATCTGTATTTATCAGCCGGTTCCGAAGACGG    392
                     ||||||||||||||.||.||.||.|||||.|||||.||.||.|..|||||
BL03634___mtn    343 TTTCAGCTGATGGACGAACACCTCTATTTGTCAGCGGGCTCAGGCGACGG    392

BSNT_02285___    393 ATACTTTGAGCTTGACGG-----CGTCAAAAGCT-CAGGATTGATCTGTT    436
                     ...|||.||||||||.||     ||      ||| |.||.||.|||||.|
BL03634___mtn    393 GCGCTTCGAGCTTGAAGGGATGCCG------GCTGCGGGGTTCATCTGCT    436

BSNT_02285___    437 ACGATATCCGTTTTCCGGAATGGATCAGAAAACATACGACAAAAGGCGCC    486
                     ||||.||||||||.|||||||||||||||||||||||||        ||.
BL03634___mtn    437 ACGACATCCGTTTCCCGGAATGGATCAGAAAACATACGA--------GCG    478

BSNT_02285___    487 AACGTGC--------TGTTTATTTCTGCGGAATGGCCTCTTCCCCGCCTT    528
                     ||.||||        |.|||.|.||.|||||.|||||.||..|||||||.
BL03634___mtn    479 AAGGTGCGGGCATCATCTTTGTATCGGCGGAGTGGCCGCTCGCCCGCCTC    528

BSNT_02285___    529 GATCATTGGAAAAGCCTGCTTATTGCGCGGGCCATTGAAAACCAATGCTT    578
                     |||||.|||.|||||||..|.|..||..|.||.||||||||.||.|||||
BL03634___mtn    529 GATCACTGGCAAAGCCTTTTAAAAGCCAGAGCGATTGAAAATCAGTGCTT    578

BSNT_02285___    579 TGTCGCAGCCTGCAATTGTACCGGTTCAAATCCGGATAATGAATTTGCAG    628
                     ||||||||||||||||.||.|.||...|.|.||||..||.||||||||.|
BL03634___mtn    579 TGTCGCAGCCTGCAATCGTTCGGGAAAAGACCCGGCAAACGAATTTGCGG    628

BSNT_02285___    629 GACATAGC-CTGATTATTGATCCATGGGGACGTGTACTTGCTGAAGGCGG    677
                     |.||.||| |.| |.||||||||....||.||....||||||||||..||
BL03634___mtn    629 GCCACAGCACAG-TCATTGATCCGCTCGGCCGCACCCTTGCTGAAGCAGG    677

BSNT_02285___    678 CCGGGAAGAAGGCATAGTCCGAGCGGAAATCGACCTTCAAG---------    718
                     .||.|.|||||...|..||.|.||.|||||||||||  |||         
BL03634___mtn    678 ACGCGGAGAAGCGGTCATCAGGGCCGAAATCGACCT--AAGGGACATTGA    725

BSNT_02285___    719 -AAAGCGCAGAAGTTCGGGAGAGCATTCCTGTTTTCAATGATATCAGAAA    767
                      ||||||        ||||.|...|||||.|||||..|.||.||..|.||
BL03634___mtn    726 AAAAGCG--------CGGGGGCAAATTCCGGTTTTTGAGGACATTCGCAA    767

BSNT_02285___    768 AGATTTATATTAA    780
                     |||||||||||||
BL03634___mtn    768 AGATTTATATTAA    780


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