Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02238 and BL03625

See Amino acid alignment / Visit BSNT_02238 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence dna-align/BSNT_02238___tnrA.1.5803.seq
#    -bsequence dna-align/BL03625___tnrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02238___tnrA-BL03625___tnrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02238___tnrA-BL03625___tnrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02238___tnrA
# 2: BL03625___tnrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     266/334 (79.6%)
# Similarity:   266/334 (79.6%)
# Gaps:           2/334 ( 0.6%)
# Score: 1046.0
# 
#
#=======================================

BSNT_02238___      1 ATGACCACAGAAGATCATTCTTATAAAGACAAAAAAGTGATTTCAATCGG     50
                     |||||....|||||||.||||||||||||.|||||||||||||||||.||
BL03625___tnr      1 ATGACAGTCGAAGATCTTTCTTATAAAGATAAAAAAGTGATTTCAATTGG     50

BSNT_02238___     51 AATTGTGAGTGAATTGACAGGATTGTCCGTAAGACAGATCAGGTATTATG    100
                     .|||||.||.||..||||.||..||||.||.||.||||||.|.|||||.|
BL03625___tnr     51 CATTGTCAGCGAGCTGACGGGTCTGTCGGTCAGGCAGATCCGCTATTACG    100

BSNT_02238___    101 AGGAACGAAAGCTCATTTACCCGCAGCGTTCTTCAAGGGGGACAAGAAAA    150
                     |.|||||.|||||.||.||.||||||||.|||.||||.||.||..|.|||
BL03625___tnr    101 AAGAACGCAAGCTGATCTATCCGCAGCGCTCTACAAGAGGCACGCGCAAA    150

BSNT_02238___    151 TACTCCTTTGCCGATGTGGAGCGGCTGATGGATATCGCCAATAAGCGTGA    200
                     ||.||||||||.||.||.||.|||||||||||.|||||.||.|||||.||
BL03625___tnr    151 TATTCCTTTGCTGACGTCGAACGGCTGATGGAAATCGCAAACAAGCGGGA    200

BSNT_02238___    201 AGACGGCGTACAGACGGCAGAGATTTTAAAGGATATGCGCAAAAAAGAAC    250
                     ||||||.||.|||||.|||||.||..|.||.|||||||||||||||||||
BL03625___tnr    201 AGACGGTGTTCAGACCGCAGAAATCCTCAAAGATATGCGCAAAAAAGAAC    250

BSNT_02238___    251 AGATGTTAAAAAACGATCCGCAAGTGCGGAAA-AAAATGCTGGAGGGGCA    299
                     |.|.|.||||||||||.|.|| ||..|.|||| ||||||||.||.||.||
BL03625___tnr    251 AAAGGCTAAAAAACGACCAGC-AGCTCAGAAAGAAAATGCTCGAAGGCCA    299

BSNT_02238___    300 GCTTAATGCTCACTTTCGGTACAAAAACCGTTAA    333
                     ||||||.|||||.|||...|||||||||||||||
BL03625___tnr    300 GCTTAACGCTCATTTTAAATACAAAAACCGTTAA    333


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