Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05172 and BL03612
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_05172___yvfG.1.5803.seq
# -bsequence dna-align/BL03612___yvfG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05172___yvfG-BL03612___yvfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05172___yvfG-BL03612___yvfG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05172___yvfG
# 2: BL03612___yvfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 179/220 (81.4%)
# Similarity: 179/220 (81.4%)
# Gaps: 5/220 ( 2.3%)
# Score: 731.0
#
#
#=======================================
BSNT_05172___ 1 ATGTCTGAACTTTTTTCCGTCCCTTATTTTATTGAGAA-TTTAAAACAGC 49
.||.|.||.|||||.|||||.||.|||||.||.||.|| |||||||| .|
BL03612___yvf 1 TTGACAGAGCTTTTCTCCGTGCCCTATTTCATAGAAAATTTTAAAAC-CC 49
BSNT_05172___ 50 ATATTGAAATGAATCAGTCTGAGGATAAAATCCACGCGATGAACAGCTAC 99
|||||||||||.|||....|||||||||||||||||||||||||||||||
BL03612___yvf 50 ATATTGAAATGCATCCAAATGAGGATAAAATCCACGCGATGAACAGCTAC 99
BSNT_05172___ 100 TACCGTTCCGTTGTCTCAACACTCGTGCAGGACCAGCTGACGAAAAACGC 149
||||||||.||.||.|||||.||.|||||.|||||||||||.||||||||
BL03612___yvf 100 TACCGTTCAGTCGTTTCAACGCTTGTGCAAGACCAGCTGACAAAAAACGC 149
BSNT_05172___ 150 AGTTGTCCTGAAACGGATTCAGCATTTAGATGAAGCATACAACAAAGTCA 199
.||.||..|.|||||||||||||||||.||||||||.|||||||||||.|
BL03612___yvf 150 CGTCGTTTTAAAACGGATTCAGCATTTGGATGAAGCCTACAACAAAGTAA 199
BSNT_05172___ 200 AACGTGGAGAATCAAAATAA 219
|.||||.||||.||.|.
BL03612___yvf 200 AGCGTGAAGAAGCATAG--- 216
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