Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05205 and BL03606
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence dna-align/BSNT_05205___yveB.1.5803.seq
# -bsequence dna-align/BL03606___levB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05205___yveB-BL03606___levB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05205___yveB-BL03606___levB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05205___yveB
# 2: BL03606___levB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1636
# Identity: 1115/1636 (68.2%)
# Similarity: 1115/1636 (68.2%)
# Gaps: 173/1636 (10.6%)
# Score: 3566.0
#
#
#=======================================
BSNT_05205___ 1 ---ATGAA--CTATATAAAAGCAG----GCAAATGGCTAACCGTAT-TCC 40
|.||| |..||||.||||.| |||..| ||||.||.| ||
BL03606___lev 1 TTGAAGAAGGCAGTATATAAGCGGATCAGCATTT---TAACTGTTTGTC- 46
BSNT_05205___ 41 TAACCTTTTTAGAAATATTGCTGTTTATC--GACTTATTTC---CA---- 81
||.||| |.||.||| || |||||| ||
BL03606___lev 47 --------TTGGAA-------TCTTCATCATGA--TATTTCTTTCAGTCC 79
BSNT_05205___ 82 ---AAAGAAGAACATGACCAAAAAATAA-----AATC----AAAACAGAA 119
||| ||.||||.|| |||| .|.|||
BL03606___lev 80 GGGAAA------------CAGAAAAAAAGGGAGAATCTCCGGATACA--- 114
BSNT_05205___ 120 GCCGGACTACCGGGCGGCATATCATTTTACGACGCCGGATAAATGGAAAA 169
|||||.||.||.||.||.|..|||||.||.||.||.||.||||||||||
BL03606___lev 115 -CCGGAATATCGTGCAGCTTTCCATTTGACAACCCCTGACAAATGGAAAA 163
BSNT_05205___ 170 ATGACCCTCAAAAACCGATCTATTTTGATGGCAAGTATCATTATTTCTAT 219
|.||||||||||||||..|||||||..||||..|.||||||||.|.|||.
BL03606___lev 164 ACGACCCTCAAAAACCCGTCTATTTCAATGGAGAATATCATTACTACTAC 213
BSNT_05205___ 220 CTATATAACCGGGATTACCCAAAAGGCAACGGCACAGAATGGCGCCATGC 269
||.||||||||.||.||.||..|.|||||.||.|||||.||||||||.||
BL03606___lev 214 CTCTATAACCGAGACTATCCGGACGGCAATGGAACAGAGTGGCGCCACGC 263
BSNT_05205___ 270 CGTCTCAGAGGATTTGGTGCACTGGACCGATGAAGGCGTGGCGATTCCGA 319
.||.|||||.|||.|.||.||||||...|||.||||.||.||.|||||||
BL03606___lev 264 AGTATCAGATGATCTCGTCCACTGGCAGGATAAAGGGGTTGCCATTCCGA 313
BSNT_05205___ 320 AATATACAAATCCGGACGGTGACATTTGGACCGGTTCCGTCGTAGTTGA- 368
|||||||.|||....|.||.||....|||.|||||||.|||||.||.||
BL03606___lev 314 AATATACGAATAAAAATGGCGATCCCTGGTCCGGTTCTGTCGTTGTCGAC 363
BSNT_05205___ 369 TAAAGAGAACACAGCCGGCTTCGGGAAAAATGCGCTTGTCGCGATTGTGA 418
|.|| |.|||||||||||||||||.|||....||.|.||.|||.||.|||
BL03606___lev 364 TCAA-AAAACACAGCCGGCTTCGGCAAAGGGACGATCGTGGCGGTTATGA 412
BSNT_05205___ 419 CACAGCCCTCAGCCAAAGACAAAAAACAGGAGCAATATTTGTGGTACAGC 468
|.|||||.||.|||||.|||...||..|.|||||||.|||.|||||||||
BL03606___lev 413 CGCAGCCGTCGGCCAATGACGGGAAGGAAGAGCAATTTTTATGGTACAGC 462
BSNT_05205___ 469 ACAGATAAAGGAAAATCATTCAAATTCTACAGTGGCAACCCCGTTATGCC 518
..|.||..|||||||.||||.|||...|||.|||...|.||.||..||||
BL03606___lev 463 CAAAATGGAGGAAAAACATTTAAACCTTACGGTGAAGAGCCGGTCTTGCC 512
BSNT_05205___ 519 TAATCCGGGCACAGACGATTTCAGAGATCCGAAAGTCATATGGGATGACC 568
||||||||||||.|.|||||||||||||||||||||.||.||||||||.|
BL03606___lev 513 TAATCCGGGCACCGTCGATTTCAGAGATCCGAAAGTGATCTGGGATGAAC 562
BSNT_05205___ 569 AGGATAACAAATGGGTCATGGTCATGGCTGAAGGATCAAAAATCGGCTTT 618
|||||.|.||||||||.||||...|||||||||||.|.|||.||||||||
BL03606___lev 563 AGGATGATAAATGGGTGATGGCGCTGGCTGAAGGAACGAAAGTCGGCTTT 612
BSNT_05205___ 619 TATGAATCCGATAATCTTAAGGACTGGCATTACACAAGCGG-ATTCTTC- 666
||.|||||..|.||.||||||||.||||.|||.||| || |.|.|||
BL03606___lev 613 TACGAATCGCAAAACCTTAAGGAATGGCGTTATACA---GGTAGTTTTCA 659
BSNT_05205___ 667 -CCAGAACA----GGCGGGAATGGTGGAATGTCCCGACCTCTACATGATG 711
.|||||.| ||| ||..|.||||||||.||.||.||.|.||||
BL03606___lev 660 AACAGAAAATATCGGC----ATCATCGAATGTCCGGATCTGTATAAGATG 705
BSNT_05205___ 712 CGGGCAAGCGACGGAACGAATAAGTGGGTTCTCGGTGCCAGCGCGAATGG 761
|||||....||||||||..||||.||||||||.||.||.|||||.||.||
BL03606___lev 706 CGGGCGGATGACGGAACATATAAATGGGTTCTTGGAGCAAGCGCCAACGG 755
BSNT_05205___ 762 CAAACCGTGG----GGCAAACCAAATACGTACGCCTACTGGACCGGAAGC 807
.||| || |||||.||.|||||.||.||.||||||||.||.|||
BL03606___lev 756 GAAA----GGGACCGGCAAGCCGAATACTTATGCATACTGGACAGGCAGC 801
BSNT_05205___ 808 TTCGACGGAAAAGAATTCAAAGCGGATCAGACTGAAG------CCCAATG 851
|||.||||.||.|||||.| ||| ||||| |||| ||||.||
BL03606___lev 802 TTCAACGGCAACGAATTTA---CGG--CAGAC-GAAGCAGAACCCCAGTG 845
BSNT_05205___ 852 GCTTGACTATGGCTTCGACTGGTATGGCGGTGTGACGTTCGAAGACAGC- 900
||||||.||.||.||.||||||||||..||.|||||.||.||.|||.||
BL03606___lev 846 GCTTGATTACGGATTTGACTGGTATGCGGGCGTGACATTTGAGGACGGCG 895
BSNT_05205___ 901 AAAAGCACAGATCCATTAGAAAAGCGGTATGCGCTTGCCTGGATGAACAA 950
|||.|.|| |||||.|..||.||.||.|||||..|.||.||||||||.||
BL03606___lev 896 AAACGAAC-GATCCGTACGAGAAACGCTATGCTTTGGCGTGGATGAATAA 944
BSNT_05205___ 951 TTGGGATTATGCCAACAACACCCCGACAATGAAGAACGGCTTTAACGGCA 1000
.|||||||||||.|||...||.||.|||..|||..||||.||||||||.|
BL03606___lev 945 CTGGGATTATGCAAACCGGACGCCAACATGGAAAGACGGTTTTAACGGAA 994
BSNT_05205___ 1001 CAGATTCTGTCATAC-GCAAACTCCGGC-------TGAAGGAGCAGGATG 1042
|.|||||..||.|.| ||||| |.|||| |.||||.|.| |||.
BL03606___lev 995 CCGATTCGATCGTCCGGCAAA-TTCGGCTTAAACATAAAGGCGGA-GATC 1042
BSNT_05205___ 1043 GAACATACAGCCTCGTCTCACAGCCGATTGAAGCTTTGGAGCAGCTGACT 1092
| |||||||||||.|||.||.||.||.||....|||||..|..|.||.
BL03606___lev 1043 G---ATACAGCCTCGCCTCTCATCCAATCGATCAATTGGATGAATTAACC 1089
BSNT_05205___ 1093 GTTTCAACTGACGAAATAGA--GGATCAGGATGTGAACGGATCAAAAACA 1140
|..||..|.||.|||.|.|| |.||| ||.|||||||||||||||||.
BL03606___lev 1090 GAATCTGCCGATGAATTGGATCGCATC--GAAGTGAACGGATCAAAAACG 1137
BSNT_05205___ 1141 TTGTCGATAACAGGTG-ATACGTACCAGCTTGATACGGATCTTTCTTGGT 1189
.||..|||.| |||.| ||||.||.||||||||..|.|||.|.||||||.
BL03606___lev 1138 CTGCAGATTA-AGGGGAATACCTATCAGCTTGAGGCAGATATCTCTTGGG 1186
BSNT_05205___ 1190 CAGAGCTAAAGAATGCAGGCGTCAGGCTCAGAGAATCAGAAGACCAAAAA 1239
..||.||.||.|||||.||..||||||||||||||||.|..||||.||||
BL03606___lev 1187 ACGACCTTAAAAATGCGGGTTTCAGGCTCAGAGAATCCGCGGACCGAAAA 1236
BSNT_05205___ 1240 CGCCATATTGATGTCGGCATTTTCGCCGAAGGCGGCTATGCATATGTCAA 1289
||||||||.|||||.||.||||..||.||||||||.|||.|.|||||.||
BL03606___lev 1237 CGCCATATCGATGTTGGAATTTCGGCTGAAGGCGGATATTCTTATGTGAA 1286
BSNT_05205___ 1290 TAGAGCAGCCACAAATCAGCCTGACAAAAGCAATACCTTTGTCGAAAGCA 1339
.||||.|...||....||||||||||..|.|...||||.|.|.|||||||
BL03606___lev 1287 CAGAGGATTTACGGGACAGCCTGACAGCACCCGCACCTATTTGGAAAGCA 1336
BSNT_05205___ 1340 AAGCTCCTTATGAT---GTAAGCAAACGTAAGGTGCATTTGAAAATACTT 1386
||||.||.|.|||| |.||..||||| |||.|||||.|.|||..|.
BL03606___lev 1337 AAGCACCGTTTGATCCGGAAAAAAAACG---GGTCCATTTCACAATTATC 1383
BSNT_05205___ 1387 GTCGAT-AAAACAACGATAGAAGTATTTGTTGGCGACGGGAAAAC--CGT 1433
||.||| ||||| ||..|.||||.||||.|||..|||||..|||| ||
BL03606___lev 1384 GTAGATCAAAAC-ACTGTCGAAGCATTTATTGATGACGGCGAAACGACG- 1431
BSNT_05205___ 1434 TTTTTCAAA---TGAAGTCTTCCCAAAGCCTGAA-GATAAAGGAAT--TA 1477
..|||||| ||.| .|||||.| |.|||| ||||.|||.|| .|
BL03606___lev 1432 -CATTCAAACCTTGCA--TTTCCCGA--CATGAATGATACAGGCATCACA 1476
BSNT_05205___ 1478 CCCTTTATTCTGACGGC------GGCACAGCCTCCTTCAAAAATATAACA 1521
|.||||| || ||.||.|||..|||..|||||.|.| |
BL03606___lev 1477 CTCTTTA--------GCGAAAATGGAACGGCCGTCTTTGAAAATCTTA-A 1517
BSNT_05205___ 1522 G-TGAAACACTTTGATTCGGTTCA-----CGAATAA 1551
| |.||||| |||| .||||| |||.|||
BL03606___lev 1518 GATCAAACA-TTTG----CGTTCAATCCGCGATTAA 1548
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