Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05205 and BL03606

See Amino acid alignment / Visit BSNT_05205 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence dna-align/BSNT_05205___yveB.1.5803.seq
#    -bsequence dna-align/BL03606___levB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05205___yveB-BL03606___levB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05205___yveB-BL03606___levB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05205___yveB
# 2: BL03606___levB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1636
# Identity:    1115/1636 (68.2%)
# Similarity:  1115/1636 (68.2%)
# Gaps:         173/1636 (10.6%)
# Score: 3566.0
# 
#
#=======================================

BSNT_05205___      1 ---ATGAA--CTATATAAAAGCAG----GCAAATGGCTAACCGTAT-TCC     40
                        |.|||  |..||||.||||.|    |||..|   ||||.||.| || 
BL03606___lev      1 TTGAAGAAGGCAGTATATAAGCGGATCAGCATTT---TAACTGTTTGTC-     46

BSNT_05205___     41 TAACCTTTTTAGAAATATTGCTGTTTATC--GACTTATTTC---CA----     81
                             ||.|||       |.||.|||  ||  ||||||   ||    
BL03606___lev     47 --------TTGGAA-------TCTTCATCATGA--TATTTCTTTCAGTCC     79

BSNT_05205___     82 ---AAAGAAGAACATGACCAAAAAATAA-----AATC----AAAACAGAA    119
                        |||            ||.||||.||     ||||    .|.|||   
BL03606___lev     80 GGGAAA------------CAGAAAAAAAGGGAGAATCTCCGGATACA---    114

BSNT_05205___    120 GCCGGACTACCGGGCGGCATATCATTTTACGACGCCGGATAAATGGAAAA    169
                      |||||.||.||.||.||.|..|||||.||.||.||.||.||||||||||
BL03606___lev    115 -CCGGAATATCGTGCAGCTTTCCATTTGACAACCCCTGACAAATGGAAAA    163

BSNT_05205___    170 ATGACCCTCAAAAACCGATCTATTTTGATGGCAAGTATCATTATTTCTAT    219
                     |.||||||||||||||..|||||||..||||..|.||||||||.|.|||.
BL03606___lev    164 ACGACCCTCAAAAACCCGTCTATTTCAATGGAGAATATCATTACTACTAC    213

BSNT_05205___    220 CTATATAACCGGGATTACCCAAAAGGCAACGGCACAGAATGGCGCCATGC    269
                     ||.||||||||.||.||.||..|.|||||.||.|||||.||||||||.||
BL03606___lev    214 CTCTATAACCGAGACTATCCGGACGGCAATGGAACAGAGTGGCGCCACGC    263

BSNT_05205___    270 CGTCTCAGAGGATTTGGTGCACTGGACCGATGAAGGCGTGGCGATTCCGA    319
                     .||.|||||.|||.|.||.||||||...|||.||||.||.||.|||||||
BL03606___lev    264 AGTATCAGATGATCTCGTCCACTGGCAGGATAAAGGGGTTGCCATTCCGA    313

BSNT_05205___    320 AATATACAAATCCGGACGGTGACATTTGGACCGGTTCCGTCGTAGTTGA-    368
                     |||||||.|||....|.||.||....|||.|||||||.|||||.||.|| 
BL03606___lev    314 AATATACGAATAAAAATGGCGATCCCTGGTCCGGTTCTGTCGTTGTCGAC    363

BSNT_05205___    369 TAAAGAGAACACAGCCGGCTTCGGGAAAAATGCGCTTGTCGCGATTGTGA    418
                     |.|| |.|||||||||||||||||.|||....||.|.||.|||.||.|||
BL03606___lev    364 TCAA-AAAACACAGCCGGCTTCGGCAAAGGGACGATCGTGGCGGTTATGA    412

BSNT_05205___    419 CACAGCCCTCAGCCAAAGACAAAAAACAGGAGCAATATTTGTGGTACAGC    468
                     |.|||||.||.|||||.|||...||..|.|||||||.|||.|||||||||
BL03606___lev    413 CGCAGCCGTCGGCCAATGACGGGAAGGAAGAGCAATTTTTATGGTACAGC    462

BSNT_05205___    469 ACAGATAAAGGAAAATCATTCAAATTCTACAGTGGCAACCCCGTTATGCC    518
                     ..|.||..|||||||.||||.|||...|||.|||...|.||.||..||||
BL03606___lev    463 CAAAATGGAGGAAAAACATTTAAACCTTACGGTGAAGAGCCGGTCTTGCC    512

BSNT_05205___    519 TAATCCGGGCACAGACGATTTCAGAGATCCGAAAGTCATATGGGATGACC    568
                     ||||||||||||.|.|||||||||||||||||||||.||.||||||||.|
BL03606___lev    513 TAATCCGGGCACCGTCGATTTCAGAGATCCGAAAGTGATCTGGGATGAAC    562

BSNT_05205___    569 AGGATAACAAATGGGTCATGGTCATGGCTGAAGGATCAAAAATCGGCTTT    618
                     |||||.|.||||||||.||||...|||||||||||.|.|||.||||||||
BL03606___lev    563 AGGATGATAAATGGGTGATGGCGCTGGCTGAAGGAACGAAAGTCGGCTTT    612

BSNT_05205___    619 TATGAATCCGATAATCTTAAGGACTGGCATTACACAAGCGG-ATTCTTC-    666
                     ||.|||||..|.||.||||||||.||||.|||.|||   || |.|.||| 
BL03606___lev    613 TACGAATCGCAAAACCTTAAGGAATGGCGTTATACA---GGTAGTTTTCA    659

BSNT_05205___    667 -CCAGAACA----GGCGGGAATGGTGGAATGTCCCGACCTCTACATGATG    711
                      .|||||.|    |||    ||..|.||||||||.||.||.||.|.||||
BL03606___lev    660 AACAGAAAATATCGGC----ATCATCGAATGTCCGGATCTGTATAAGATG    705

BSNT_05205___    712 CGGGCAAGCGACGGAACGAATAAGTGGGTTCTCGGTGCCAGCGCGAATGG    761
                     |||||....||||||||..||||.||||||||.||.||.|||||.||.||
BL03606___lev    706 CGGGCGGATGACGGAACATATAAATGGGTTCTTGGAGCAAGCGCCAACGG    755

BSNT_05205___    762 CAAACCGTGG----GGCAAACCAAATACGTACGCCTACTGGACCGGAAGC    807
                     .|||    ||    |||||.||.|||||.||.||.||||||||.||.|||
BL03606___lev    756 GAAA----GGGACCGGCAAGCCGAATACTTATGCATACTGGACAGGCAGC    801

BSNT_05205___    808 TTCGACGGAAAAGAATTCAAAGCGGATCAGACTGAAG------CCCAATG    851
                     |||.||||.||.|||||.|   |||  ||||| ||||      ||||.||
BL03606___lev    802 TTCAACGGCAACGAATTTA---CGG--CAGAC-GAAGCAGAACCCCAGTG    845

BSNT_05205___    852 GCTTGACTATGGCTTCGACTGGTATGGCGGTGTGACGTTCGAAGACAGC-    900
                     ||||||.||.||.||.||||||||||..||.|||||.||.||.|||.|| 
BL03606___lev    846 GCTTGATTACGGATTTGACTGGTATGCGGGCGTGACATTTGAGGACGGCG    895

BSNT_05205___    901 AAAAGCACAGATCCATTAGAAAAGCGGTATGCGCTTGCCTGGATGAACAA    950
                     |||.|.|| |||||.|..||.||.||.|||||..|.||.||||||||.||
BL03606___lev    896 AAACGAAC-GATCCGTACGAGAAACGCTATGCTTTGGCGTGGATGAATAA    944

BSNT_05205___    951 TTGGGATTATGCCAACAACACCCCGACAATGAAGAACGGCTTTAACGGCA   1000
                     .|||||||||||.|||...||.||.|||..|||..||||.||||||||.|
BL03606___lev    945 CTGGGATTATGCAAACCGGACGCCAACATGGAAAGACGGTTTTAACGGAA    994

BSNT_05205___   1001 CAGATTCTGTCATAC-GCAAACTCCGGC-------TGAAGGAGCAGGATG   1042
                     |.|||||..||.|.| ||||| |.||||       |.||||.|.| |||.
BL03606___lev    995 CCGATTCGATCGTCCGGCAAA-TTCGGCTTAAACATAAAGGCGGA-GATC   1042

BSNT_05205___   1043 GAACATACAGCCTCGTCTCACAGCCGATTGAAGCTTTGGAGCAGCTGACT   1092
                     |   |||||||||||.|||.||.||.||.||....|||||..|..|.||.
BL03606___lev   1043 G---ATACAGCCTCGCCTCTCATCCAATCGATCAATTGGATGAATTAACC   1089

BSNT_05205___   1093 GTTTCAACTGACGAAATAGA--GGATCAGGATGTGAACGGATCAAAAACA   1140
                     |..||..|.||.|||.|.||  |.|||  ||.|||||||||||||||||.
BL03606___lev   1090 GAATCTGCCGATGAATTGGATCGCATC--GAAGTGAACGGATCAAAAACG   1137

BSNT_05205___   1141 TTGTCGATAACAGGTG-ATACGTACCAGCTTGATACGGATCTTTCTTGGT   1189
                     .||..|||.| |||.| ||||.||.||||||||..|.|||.|.||||||.
BL03606___lev   1138 CTGCAGATTA-AGGGGAATACCTATCAGCTTGAGGCAGATATCTCTTGGG   1186

BSNT_05205___   1190 CAGAGCTAAAGAATGCAGGCGTCAGGCTCAGAGAATCAGAAGACCAAAAA   1239
                     ..||.||.||.|||||.||..||||||||||||||||.|..||||.||||
BL03606___lev   1187 ACGACCTTAAAAATGCGGGTTTCAGGCTCAGAGAATCCGCGGACCGAAAA   1236

BSNT_05205___   1240 CGCCATATTGATGTCGGCATTTTCGCCGAAGGCGGCTATGCATATGTCAA   1289
                     ||||||||.|||||.||.||||..||.||||||||.|||.|.|||||.||
BL03606___lev   1237 CGCCATATCGATGTTGGAATTTCGGCTGAAGGCGGATATTCTTATGTGAA   1286

BSNT_05205___   1290 TAGAGCAGCCACAAATCAGCCTGACAAAAGCAATACCTTTGTCGAAAGCA   1339
                     .||||.|...||....||||||||||..|.|...||||.|.|.|||||||
BL03606___lev   1287 CAGAGGATTTACGGGACAGCCTGACAGCACCCGCACCTATTTGGAAAGCA   1336

BSNT_05205___   1340 AAGCTCCTTATGAT---GTAAGCAAACGTAAGGTGCATTTGAAAATACTT   1386
                     ||||.||.|.||||   |.||..|||||   |||.|||||.|.|||..|.
BL03606___lev   1337 AAGCACCGTTTGATCCGGAAAAAAAACG---GGTCCATTTCACAATTATC   1383

BSNT_05205___   1387 GTCGAT-AAAACAACGATAGAAGTATTTGTTGGCGACGGGAAAAC--CGT   1433
                     ||.||| ||||| ||..|.||||.||||.|||..|||||..||||  || 
BL03606___lev   1384 GTAGATCAAAAC-ACTGTCGAAGCATTTATTGATGACGGCGAAACGACG-   1431

BSNT_05205___   1434 TTTTTCAAA---TGAAGTCTTCCCAAAGCCTGAA-GATAAAGGAAT--TA   1477
                      ..||||||   ||.|  .|||||.|  |.|||| ||||.|||.||  .|
BL03606___lev   1432 -CATTCAAACCTTGCA--TTTCCCGA--CATGAATGATACAGGCATCACA   1476

BSNT_05205___   1478 CCCTTTATTCTGACGGC------GGCACAGCCTCCTTCAAAAATATAACA   1521
                     |.|||||        ||      ||.||.|||..|||..|||||.|.| |
BL03606___lev   1477 CTCTTTA--------GCGAAAATGGAACGGCCGTCTTTGAAAATCTTA-A   1517

BSNT_05205___   1522 G-TGAAACACTTTGATTCGGTTCA-----CGAATAA   1551
                     | |.||||| ||||    .|||||     |||.|||
BL03606___lev   1518 GATCAAACA-TTTG----CGTTCAATCCGCGATTAA   1548


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