Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05259 and BL03605
See
Amino acid alignment /
Visit
BSNT_05259 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence dna-align/BSNT_05259___clpP.1.5803.seq
# -bsequence dna-align/BL03605___clpP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05259___clpP-BL03605___clpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05259___clpP-BL03605___clpP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05259___clpP
# 2: BL03605___clpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 610
# Identity: 499/610 (81.8%)
# Similarity: 499/610 (81.8%)
# Gaps: 29/610 ( 4.8%)
# Score: 2086.0
#
#
#=======================================
BSNT_05259___ 1 ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGC 50
|||||||||||||||||||||||||||||.||||||||||||||||||||
BL03605___clp 1 ATGAATTTAATACCTACAGTCATTGAACAGACGAACCGCGGGGAAAGAGC 50
BSNT_05259___ 51 GTATGACATTTATTCTCGTCTATTAAAGGATCGTATCATCATGCTTGGAT 100
||||||||||||.||.||..|.||.||.||.||||||||.|||||.||||
BL03605___clp 51 GTATGACATTTACTCACGCTTGTTGAAAGACCGTATCATTATGCTGGGAT 100
BSNT_05259___ 101 CTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTC 150
|.||.||.||||||||.|||||||||||||||||.||.||||||.|||||
BL03605___clp 101 CAGCAATCGATGACAATGTTGCGAACTCCATCGTATCTCAGCTTCTATTC 150
BSNT_05259___ 151 TTAGCAGCAGAAGACCCTGAAAAAGAAATTTCTC----TTTACATCAACA 196
.|.|.|||.|||||.||.|||||||| |.|| |.||.|||||||
BL03605___clp 151 CTTGAAGCCGAAGATCCAGAAAAAGA----TATCAGCATCTATATCAACA 196
BSNT_05259___ 197 GCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACCATGCAG 246
||||.||||||||.||.|||||||||||||||||.|||||.|||||||||
BL03605___clp 197 GCCCTGGCGGCTCCATCACAGCCGGTATGGCGATTTATGACACCATGCAG 246
BSNT_05259___ 247 TTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAAT 296
||||||||.|||.|.||.||.||.|||||||..||.|||||.|||||.||
BL03605___clp 247 TTTATTAAACCGCAAGTCTCCACGATTTGTACGGGAATGGCGGCATCCAT 296
BSNT_05259___ 297 GGGCGCTTTCCTGCTTGCAGCCGGCGAAAAAGGCAAACGCTATGCGCTTC 346
|||.||.|||||.||||||||||||||.|||||.||.|||||.||.||||
BL03605___clp 297 GGGTGCGTTCCTTCTTGCAGCCGGCGAGAAAGGGAAGCGCTACGCTCTTC 346
BSNT_05259___ 347 CAAACAGTGAAGTCATGATTCACCAGCCACTTGGCGGTGCGCAAGGTCAG 396
|||||||||||||||||||.||||||||.||||||||.|||||.||||||
BL03605___clp 347 CAAACAGTGAAGTCATGATCCACCAGCCGCTTGGCGGAGCGCAGGGTCAG 396
BSNT_05259___ 397 GCGACAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTT-CGCGACA 445
|||||.||||||||||||||||||||||||||||| ||..|| |||||||
BL03605___clp 397 GCGACTGAAATTGAAATTGCCGCGAAACGCATTCT-TTCATTGCGCGACA 445
BSNT_05259___ 446 AACTAAACAAAGTCCTTGCTGAACGTACTGGCCAGCCGCTTGAAGTGATC 495
|.||.||||||.|||||||.||.||.|||||.||||||||||||||.|||
BL03605___clp 446 AGCTGAACAAAATCCTTGCAGAGCGCACTGGGCAGCCGCTTGAAGTAATC 495
BSNT_05259___ 496 GAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGA 545
||.|||||.||||||||.||.||||||||..|.|||||||||||....||
BL03605___clp 496 GAGCGCGATACAGACCGCGACAACTTCAAAACGGCTGAAGAAGCAAAAGA 545
BSNT_05259___ 546 ATACGGCCTGATTGACAAAAT--TTTGACTCA---------CACAGAAGA 584
|||||||||||||||.|||.| ||..||.|| |||||
BL03605___clp 546 ATACGGCCTGATTGATAAAGTGCTTACACGCAATATCGACGCACAG---- 591
BSNT_05259___ 585 CAAAAAGTAA 594
||||||
BL03605___clp 592 ----AAGTAA 597
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.