Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02365 and BL03591
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_02365___ykuQ.1.5803.seq
# -bsequence dna-align/BL03591___ykuQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02365___ykuQ-BL03591___ykuQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02365___ykuQ-BL03591___ykuQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02365___ykuQ
# 2: BL03591___ykuQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity: 584/712 (82.0%)
# Similarity: 584/712 (82.0%)
# Gaps: 2/712 ( 0.3%)
# Score: 2396.0
#
#
#=======================================
BSNT_02365___ 1 ATGAAAATGATGGACGCAAATGAAATTATTTCATTTATTCAAAATAGTAC 50
||||||||||||||.||||||||.|||||.|||||||||||||||||||.
BL03591___yku 1 ATGAAAATGATGGATGCAAATGAGATTATCTCATTTATTCAAAATAGTAA 50
BSNT_02365___ 51 AAAATCAACACCTGTAAAGGTTTACGTGAAAGGTGAGCTGGAAGGAATCA 100
.|||||.||||||||.||.||.||.||||||||.||.||.||||||||..
BL03591___yku 51 GAAATCGACACCTGTTAAAGTGTATGTGAAAGGCGACCTTGAAGGAATTG 100
BSNT_02365___ 101 ATTTCGGCGAATCTGCGAAAGCTTTTATCAACGGAAACACTGGTGTCGTT 150
|.|||||||..||.||.||..|||||||.|..||.||.||.||.||.||.
BL03591___yku 101 ACTTCGGCGCTTCAGCCAAGCCTTTTATTACAGGCAATACAGGGGTTGTA 150
BSNT_02365___ 151 TTCGGTGAGTGGAGC-GAAATCCAAACAGCAATCGAAGAAAACCAAAGCA 199
|||||.||.||| || ||.||.|||.|.||..||||||..|||.||.|||
BL03591___yku 151 TTCGGAGAATGG-GCGGAGATTCAAGCTGCGCTCGAAGCCAACAAAGGCA 199
BSNT_02365___ 200 AAATCGAAGACTATGTGGTTGAAAATGACCGCCGCAATTCTGCGATCCCA 249
||||.|||||||||||..|.|||||.||||||||||||||.|||||.|||
BL03591___yku 200 AAATTGAAGACTATGTCATCGAAAACGACCGCCGCAATTCGGCGATTCCA 249
BSNT_02365___ 250 ATGCTTGATCTTAAAAACATCAAAGCGCGTATCGAGCCGGGCGCGATCAT 299
|.|||.|||.|.|||||.||.||||||||.|||||||||||.||||||||
BL03591___yku 250 ACGCTCGATTTAAAAAATATTAAAGCGCGCATCGAGCCGGGTGCGATCAT 299
BSNT_02365___ 300 CCGCGACCAAGTTGAAATCGGTGATAACGCAGTCATCATGATGGGTGCTT 349
||||||.|||||.||||||||.|||||.||.||||||||||||||.||||
BL03591___yku 300 CCGCGATCAAGTGGAAATCGGCGATAATGCCGTCATCATGATGGGGGCTT 349
BSNT_02365___ 350 CTATTAATATCGGTTCAGTCATCGGCGAAGGCACAATGATTGATATGAAC 399
|.||.||.|||||.||.||.|||||.|||||.||.|||||.||||||||.
BL03591___yku 350 CCATCAACATCGGCTCTGTGATCGGAGAAGGAACGATGATCGATATGAAT 399
BSNT_02365___ 400 GTTGTGCTTGGCGGACGAGCTACTGTTGGAAAAAACTGCCATATCGGCGC 449
||.|||||.||||||||||||||.||.||.|||||||||||.|||||.||
BL03591___yku 400 GTCGTGCTGGGCGGACGAGCTACCGTCGGCAAAAACTGCCACATCGGAGC 449
BSNT_02365___ 450 GGGTTCTGTACTTGCGGGCGTTATTGAGCCGCCATCCGCTAAACCGGTTG 499
|||.||.||.||||||||.||.||||||||.||.||.||.|||||.||.|
BL03591___yku 450 GGGATCCGTGCTTGCGGGTGTCATTGAGCCTCCTTCAGCAAAACCTGTCG 499
BSNT_02365___ 500 TGATTGAAGACGACGTCGTAATCGGCGCAAATGCTGTTGTGCTTGAAGGC 549
|.|||||||||||.|||||.|||||.|||||.||.||.||.|||||||||
BL03591___yku 500 TTATTGAAGACGATGTCGTCATCGGTGCAAACGCCGTCGTACTTGAAGGC 549
BSNT_02365___ 550 GTAACAGTAGGTAAAGGAGCTGTTGTTGCTGCGGGCGCGATCGTGGTAAA 599
||.||.||.||.||||||||.|||||||||||.|||||||||||.||..|
BL03591___yku 550 GTGACTGTCGGAAAAGGAGCCGTTGTTGCTGCCGGCGCGATCGTTGTGGA 599
BSNT_02365___ 600 CGACGTTGAGCCATACACTGTCGTTGCAGGCACACCAGCTAAAAAAATCA 649
.||.||||||||.|||||.||.||.||.||.|||||.||.||||||||||
BL03591___yku 600 AGATGTTGAGCCTTACACAGTAGTCGCCGGAACACCTGCGAAAAAAATCA 649
BSNT_02365___ 650 AAGACATTGATGAAAAAACAAAAGGCAAAACTGAAATCAAGCAGGAATTA 699
|||||||.|||||||||||.|||||||||||.||||||||.||||||||.
BL03591___yku 650 AAGACATCGATGAAAAAACTAAAGGCAAAACAGAAATCAAACAGGAATTG 699
BSNT_02365___ 700 CGCCAGCTGTAA 711
||||||||.|||
BL03591___yku 700 CGCCAGCTTTAA 711
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