Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02347 and BL03579
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence dna-align/BSNT_02347___cheV.1.5803.seq
# -bsequence dna-align/BL03579___cheV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02347___cheV-BL03579___cheV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02347___cheV-BL03579___cheV.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02347___cheV
# 2: BL03579___cheV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 943
# Identity: 650/943 (68.9%)
# Similarity: 650/943 (68.9%)
# Gaps: 83/943 ( 8.8%)
# Score: 2241.5
#
#
#=======================================
BSNT_02347___ 1 ---------------------------TTGGATTCTGGTACAAATGAATT 23
||...|||.||.||.||||||||
BL03579___che 1 GTGTCTTCAAACCAACAGGAAATTTTATTAAGTTCGGGAACCAATGAATT 50
BSNT_02347___ 24 AGAAATTGTGAAGTTTGGCGTGGG--TGAAAATGCTTTCGGAATTAACGT 71
||||||.||||||||.|..||.|| |.||.|| ||||||.||.||.||
BL03579___che 51 AGAAATCGTGAAGTTCGAGGTTGGTCTCAACAT--TTTCGGCATAAATGT 98
BSNT_02347___ 72 CATGAAGGTAAGAGAAATTATTCAGCCTGTCGAGGTGACATCAGTGCCTC 121
||||||.||.||||||||.||||||||.||.||..|.||...||||||||
BL03579___che 99 CATGAAAGTCAGAGAAATCATTCAGCCGGTTGAAATTACGAAAGTGCCTC 148
BSNT_02347___ 122 ACTCCCATCAGCATGTAGAAGGAATGATTAAACTCAGAGGAGAAATCCTC 171
|.||.|||.|||||.|.||.||.|||||||.|.|..|.||.|||||.||.
BL03579___che 149 ATTCGCATAAGCATATGGAGGGCATGATTACATTGCGCGGGGAAATTCTT 198
BSNT_02347___ 172 CCTGTGATCAGTCTCTTCTCATTTTTTGGAGTAGAGC------CTGA--A 213
||.||.||...|.|.|||||.||.|||||.||.|||| .||| |
BL03579___che 199 CCCGTCATTGATTTATTCTCTTTCTTTGGCGTTGAGCACGGTGATGACGA 248
BSNT_02347___ 214 GGATCAAAAGATGAGAAATATATCGTGACTGAATTTAATAAACGGAAAAT 263
|.||||| ||.|||||.||.|||||.||||||||.||.||||||||
BL03579___che 249 GCATCAA-----GAAAAATACATTGTGACGGAATTTAACAAGCGGAAAAT 293
BSNT_02347___ 264 TGTTTTTCATGTCGGCTCTGTTTCTCAAATTCACAGAGTATCCTGGGAAG 313
.||.|||||....||..|.|||||.||.||||||.|.||.||.|||||||
BL03579___che 294 CGTCTTTCACACTGGAGCGGTTTCACAGATTCACCGGGTGTCATGGGAAG 343
BSNT_02347___ 314 CGATTGAAAAGCCGACATCGTTAAATCAAGGAATGGAGCGGCACCTTACC 363
..|||||.||||||||..|.||.||||||||.|||||.||.|||||||||
BL03579___che 344 AAATTGAGAAGCCGACTGCTTTGAATCAAGGGATGGACCGTCACCTTACC 393
BSNT_02347___ 364 GGGATTATTAAGCTCGAAG--ACCTGATGATCTTTTTGCCTGACTATGAA 411
||.||.|||||||||||.| ||| |||||.||..||||.||.||.|||
BL03579___che 394 GGCATCATTAAGCTCGACGGCACC--ATGATTTTCCTGCCAGATTACGAA 441
BSNT_02347___ 412 AAAATTATTTATGACATTGAATCAGATTCAGGTGTTGACACGTATAATAT 461
|||||.||||.|||..||||.||.||.||||||.|.|||.|.|||.|.||
BL03579___che 442 AAAATCATTTTTGATCTTGAGTCTGAGTCAGGTATGGACCCTTATCAAAT 491
BSNT_02347___ 462 GCATACCGAGGGCTTCGATGAAAGAAGAACTGATAAAAAGCTTATCATTG 511
|.|.|..||....||||||.|.|||.|.|||||.||||||||.|||||||
BL03579___che 492 GAAAAATGAAAAATTCGATCAGAGACGGACTGACAAAAAGCTGATCATTG 541
BSNT_02347___ 512 TAGAGGACTCACCGCTTTTGATGCGCCTCTTGCAGGA-----TGAATTAA 556
|.||||||||.|||||..|..||||.||.|||..||| |||||
BL03579___che 542 TCGAGGACTCTCCGCTCCTCTTGCGGCTATTGGTGGAAAAGCTGAAT--- 588
BSNT_02347___ 557 AAGAAGCAGGGTACAACAACATCGCTTCGTTTGAAAATGGAAAAGAGGCA 606
|||||.||.|||||||||||||..||.||||||||.||||||||.||.
BL03579___che 589 --GAAGCGGGATACAACAACATCGTGTCTTTTGAAAACGGAAAAGACGCT 636
BSNT_02347___ 607 TATGAATAC--------ATT-ATGAACCTTGCTGAAAACGAAACTGATTT 647
||.||..|| ||| ||| |||.|||..||.|.|.|
BL03579___che 637 TACGAGCACGCGCTTCAATTGATG---------GAAGACGGCACAGCTCT 677
BSNT_02347___ 648 ATCA-GAACAGATTGATATGATCATCACTGATATTGAAATGCCAAAAATG 696
||| |||.|..|.|||.||||.|||||.||||||||||||||..|.|||
BL03579___che 678 -TCACGAAAAAGTCGATCTGATGATCACGGATATTGAAATGCCGCAGATG 726
BSNT_02347___ 697 GACGGACACAGGCTCACAAAGCTGCTGAAGGAAAATCCGAAAAGCTCAGA 746
||.||||||.||||||||||||||||.||.||.||.|||...||..|.||
BL03579___che 727 GATGGACACCGGCTCACAAAGCTGCTAAAAGATAACCCGCTGAGTACGGA 776
BSNT_02347___ 747 TGTGCCGGTTATGATTTTCTCATCGTTAATTACGGATGATCTGCGTCACC 796
..|||||.|..||||||||||.||.||.|||||.||.|||||.||.||..
BL03579___che 777 GCTGCCGATCTTGATTTTCTCTTCTTTGATTACAGACGATCTTCGCCATA 826
BSNT_02347___ 797 GCGGCGAAGTTGTAGGCGCAGATGAGCAAATCAGCAAGCCTGAGATCAGT 846
..||.|||...||.||.||.|||||.||||||||||||||.|||.|||.|
BL03579___che 827 AAGGGGAACAAGTCGGAGCCGATGAACAAATCAGCAAGCCAGAGCTCAAT 876
BSNT_02347___ 847 GATTTGATTAAAAAAGTGGATACGTATGTTATTGAATAA---- 885
||..||||..||||..|.||||..|||.|| ||.||.||
BL03579___che 877 GAACTGATCGAAAAGCTTGATAAATATATT-TTCAAGAACTAA 918
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