Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02342 and BL03576
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence dna-align/BSNT_02342___kinA.1.5803.seq
# -bsequence dna-align/BL03576___kinA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02342___kinA-BL03576___kinA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02342___kinA-BL03576___kinA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02342___kinA
# 2: BL03576___kinA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1946
# Identity: 1281/1946 (65.8%)
# Similarity: 1281/1946 (65.8%)
# Gaps: 250/1946 (12.8%)
# Score: 4246.5
#
#
#=======================================
BSNT_02342___ 1 GTGGAACAGGATACGCAGCATGTTAAACCACTTCAAACAAAA-------A 43
.|||||| ||| |||||||| |
BL03576___kin 1 ATGGAAC-----------------AAA-------AAACAAAACGTTTTGA 26
BSNT_02342___ 44 CCGATAT-----TCAT------------GCAGTCTTGGCCTCTAATGGAC 76
.|.|||| |||| ||||||.||.|..||||.||.|
BL03576___kin 27 GCAATATAAGCCTCATATGAATTTACAGGCAGTCCTGTCAGCTAACGGCC 76
BSNT_02342___ 77 GCATCATTTATATATCTGCCAACTCCAAACTGCATTTGGGCTATCTCCAA 126
|..|.||.||.||||||||.||.|.||||..||..||..|||| |.|
BL03576___kin 77 GTTTTATATACATATCTGCAAATTGCAAAGAGCTCTTAAGCTA----CGA 122
BSNT_02342___ 127 GGAGAGATGATCGGATCATTCCTCAAAACGTTTCTG------------CA 164
|.||| ||||.|.||||..| ||||.|.|| ||
BL03576___kin 123 GCAGA-ATGAACTGATCGGT-------ACGTATTTGAAGGACTATTTACA 164
BSNT_02342___ 165 TGAGGAAGACCAATTTTTGGTTGAAAGCTATTTTTATAATGAACATCATC 214
.||.||.||.|..|||.||||.||||||||||||||.|||||.||||||.
BL03576___kin 165 CGAAGACGATCTTTTTCTGGTAGAAAGCTATTTTTACAATGAGCATCATT 214
BSNT_02342___ 215 TGATGCCGTGCACCTTTCGTTTTATTAAAAAAGATCATACGATTGTGTGG 264
||.||||.||||||||..|.|||.|.||||||||..|.|||||..|.|||
BL03576___kin 215 TGCTGCCCTGCACCTTCAGATTTGTGAAAAAAGACTACACGATGATCTGG 264
BSNT_02342___ 265 GTGGAGGCTGCGGTAGAAATTGTTACGAC--------AAGAGCTGAGCGG 306
.|.||.||..||.|.||..|.||.||||| .||| .
BL03576___kin 265 ATCGAAGCATCGATCGATTTCGTGACGACCCATGTTGGAGA--------A 306
BSNT_02342___ 307 ACAGAACGGGAAATCATTTTGAAAATGAAGGTTCTTGAAG---------- 346
|.||||||.|||||..|..|.||||||||.||..||||||
BL03576___kin 307 AAAGAACGCGAAATTGTACTCAAAATGAAAGTGTTTGAAGACCGTCCCTC 356
BSNT_02342___ 347 -AAGAAA--CAG-GCCATCAA------------TCC-----------CTA 369
|||||| ||| .||||.|| ||| |.|
BL03576___kin 357 TAAGAAAAGCAGCTCCATAAAAGAGGAAGACGCTCCGGAAGAAGCCTCCA 406
BSNT_02342___ 370 AACTGC--GAAAAACATGAAATCGAACCTGCAAGCCCGGAATCGACTACA 417
..|||| |.||||.|.|||.||| |||||
BL03576___kin 407 GGCTGCCGGCAAAAGAGGAATTCG-------AAGCC-------------- 435
BSNT_02342___ 418 TATATAACGGATGATTATGAACGGTTGGTTGAAAATCTCCCGAGTCCGCT 467
||||| .|||.|.||| ||.|..||.||
BL03576___kin 436 ----------ATGAT--CGAAGGCTTG------------CCAAACCCTCT 461
BSNT_02342___ 468 ATGCATCAGTG-TCAAAGGCAAGATCGTCTATGTAAACAGCGCGATGCTC 516
.||||||||.| ||||.||.|| ||.|||||.|||||...|||.||| .
BL03576___kin 462 GTGCATCAGCGTTCAAGGGGAA-ATAGTCTACGTAAATGACGCCATG--G 508
BSNT_02342___ 517 TCAA--TGCTGGGAGC-------AAAAAGCAAGGATGCTATTATTGGAAA 557
|||| ||||.||||| |||..|||| |||||.|||||
BL03576___kin 509 TCAACCTGCTCGGAGCCGAGCATAAACGGCAA-------ATTATCGGAAA 551
BSNT_02342___ 558 ATGGTCCTATGAATTTATTGAAGAAGAATATCATGATATCGTGAAAAACA 607
.|..|||||.||.|||||.||..||||.||.|||||.|||||.||||||.
BL03576___kin 552 GTATTCCTACGATTTTATCGAGAAAGAGTACCATGACATCGTCAAAAACC 601
BSNT_02342___ 608 GGATTATACGAATGCAAAAAGGAATGGAAGTCGGAATGATTGAACAGACG 657
|.||||..||.|||||..|.|||.|.||.|||||||||||.||.||.|||
BL03576___kin 602 GCATTAAGCGGATGCAGCAGGGACTTGATGTCGGAATGATCGAGCAAACG 651
BSNT_02342___ 658 TGGAAAAGGCTTGATGGCACACCTGTTCATTTAGAAGTGAAAGCATCCCC 707
|||.|.|.|||.||.|||||.|...||||..|.|||||.||.||..|.||
BL03576___kin 652 TGGCATAAGCTCGACGGCACGCAGATTCACCTCGAAGTCAAGGCGGCGCC 701
BSNT_02342___ 708 GACCGTCTACAAAAACCAGCAGGCTGAGCTG---CTGCTGATCGATATCT 754
||||.|.||..||||||||.|.||.|||||| ||.||.||.||.||.|
BL03576___kin 702 GACCATTTATCAAAACCAGAAAGCGGAGCTGCTTCTTCTCATTGACATTT 751
BSNT_02342___ 755 CTTCAAGGAAAAAATTCCAAACCATCCTGCAAAAAAGCCGTGAACGATAT 804
|.||.||.||||||||.||.|||||..|||||||||||.|.||.||||||
BL03576___kin 752 CATCGAGAAAAAAATTTCAGACCATTTTGCAAAAAAGCAGGGAGCGATAT 801
BSNT_02342___ 805 CAGCTGCTGATTCAAAATTCCATTGATACCATTGCGGTGATTCACAATGG 854
|||||..||||||||||.||.||.|||||.||.||.||||||||.||.||
BL03576___kin 802 CAGCTCTTGATTCAAAACTCAATCGATACGATAGCCGTGATTCATAAAGG 851
BSNT_02342___ 855 AAAATGGGTGTTTATGAATGAATCGGGAATTTCCCTGTTTGAAGCGGCTA 904
||.||||||.|||||||||||||||||.|||...|||||||||||....|
BL03576___kin 852 AAGATGGGTCTTTATGAATGAATCGGGCATTCGTCTGTTTGAAGCAAAGA 901
BSNT_02342___ 905 CATATGAGGATTTAATTGGCAAAAACATATACGATCAGCTGCATCCTTGC 954
|.||||||||||||||.||||||.|.||.|||||.||.|||||.||.|||
BL03576___kin 902 CGTATGAGGATTTAATCGGCAAAGATATTTACGAACACCTGCACCCATGC 951
BSNT_02342___ 955 GATCACGAGGATGTAAAAGAGAGAATCCAAAAC--ATCGCCGAGCAAAAA 1002
||||||||.|||||.||||.||| .|..|||| |||.|.||.|...||
BL03576___kin 952 GATCACGAAGATGTCAAAGCGAG--GCTGAAACGGATCACAGACCGCCAA 999
BSNT_02342___ 1003 ACAGAATCTGAAATTGTCAAGCAATCCTGGTTCACCTTTCAGAACAGGGT 1052
.|.|||||||||||..|.||.||..|.||||..||.|||.|.||.|||.|
BL03576___kin 1000 TCCGAATCTGAAATCATAAAACAGACGTGGTATACATTTGAAAAAAGGCT 1049
BSNT_02342___ 1053 CATCTATACGGAGATGGTCTGCATTCCGACGACCTTTTTTGGTGAAGCGG 1102
|||||||||.||.|||||.|||||.||.|||||.|||||.||.|||.|||
BL03576___kin 1050 CATCTATACAGAAATGGTTTGCATCCCTACGACATTTTTCGGGGAAACGG 1099
BSNT_02342___ 1103 CCGTCCAGGTCATTCTTCGGGATATCTCAGAGAGAAAACAAACAGAAGAA 1152
|.||.|||||.|||.|..||||.||.||.||..|.||.||.||.|||||.
BL03576___kin 1100 CGGTTCAGGTGATTTTAAGGGACATTTCTGAACGCAAGCAGACCGAAGAG 1149
BSNT_02342___ 1153 TTGATGCTGAAATCGGAAAAATTATCAATCGCAGGGCAGCTCGCGGCGGG 1202
.|||||.|....||||||||..|.||.||.||.||.|||||.||.||.||
BL03576___kin 1150 CTGATGGTCCGTTCGGAAAAGCTGTCGATTGCCGGACAGCTTGCAGCCGG 1199
BSNT_02342___ 1203 AATCGCCCATGAGATCCGCAACCCTCTTACAGCGATCAAAGGATTTTTAC 1252
.|||||||||||.||||||||.||.||.||.|||||||||||.|||||.|
BL03576___kin 1200 GATCGCCCATGAAATCCGCAATCCGCTCACCGCGATCAAAGGGTTTTTGC 1249
BSNT_02342___ 1253 AGCTGATGAAACCGACAATGGAAGGCAACGAACATTACTTTGATATTGTG 1302
||||||||||.|||||||||||||..||.||||||||.|||.|||||.|.
BL03576___kin 1250 AGCTGATGAAGCCGACAATGGAAGAAAATGAACATTATTTTAATATTATC 1299
BSNT_02342___ 1303 TTTTCTGAACTCAGCCGTATCGAATTAATACTCAGTGAATTGCTCATGCT 1352
|||||.||..|.|||.|.||||||||.||..|.||.||..|.||||||||
BL03576___kin 1300 TTTTCCGAGTTAAGCAGAATCGAATTGATCTTGAGCGAGCTTCTCATGCT 1349
BSNT_02342___ 1353 GGCGAAACCTCAGCAAAATGCTGTCAAAGAATA-TTTGAACTTGAAAAAA 1401
|||.||.||.||||||||.||..|.||||||.| .||||.| |||..|..
BL03576___kin 1350 GGCAAAGCCGCAGCAAAACGCATTGAAAGAAAAGCTTGATC-TGATCAGG 1398
BSNT_02342___ 1402 TTAATTGGTGAGGTTTCAGCCCTGTTAGAAACGCAGGCGAATTTAAATGG 1451
.|.||..|.||.||..|.||.||.||||||||||||||.||.|||||.||
BL03576___kin 1399 CTGATCCGCGAAGTGACGGCGCTTTTAGAAACGCAGGCCAACTTAAACGG 1448
BSNT_02342___ 1452 CATTTTTATCAGAACAAGTTATGA-AAAAGACAGCATTTATATAAACGGG 1500
||||||.||||..||.| |..|.| |.|.||||..|||||.||.||.|||
BL03576___kin 1449 CATTTTGATCAATACGA-TCCTCACAGACGACAAAATTTACATTAAAGGG 1497
BSNT_02342___ 1501 GATCAAAACCAATTAAAGCAGGTATTCATTAATTTAATCAAAAATGCAGT 1550
||||||||.|||||||||||.||.||.||.||..||||||||||.||.||
BL03576___kin 1498 GATCAAAATCAATTAAAGCAAGTGTTTATCAACCTAATCAAAAACGCCGT 1547
BSNT_02342___ 1551 TGAATCAATGCCTGATGGGGGAACAGTAGACATTATCAT----------- 1589
.|||||.|||||..|.||.||.||.|| ||||
BL03576___kin 1548 CGAATCCATGCCAAACGGCGGGACGGT--------TCATTTGACGGTCAG 1589
BSNT_02342___ 1590 ---AACCGAAGATGAGCATTCTGT--TCATGTTACTGTCAAAGACGAAGG 1634
||||||.| ||||.|| || ||....||..|.||||||||
BL03576___kin 1590 AGAAACCGACG------ATTCGGTCGTC--GTCGAGGTGGAGGACGAAGG 1631
BSNT_02342___ 1635 GGAAGGTATACCTGAAAAGGTACTAAACCGGATTGGAGAGCCATTTTTAA 1684
.|||||.|||||||||.|.||.||.||.|||||.||.|||||.|||||.|
BL03576___kin 1632 AGAAGGGATACCTGAACATGTCCTGAAGCGGATCGGCGAGCCGTTTTTGA 1681
BSNT_02342___ 1685 CAACAAAAGAAAAAGGTACGGGGCTTGGATTAATGGTGACATTTAATATC 1734
|.||.||.||||||||.||.||.||.||.||.|||||.||.||.||||||
BL03576___kin 1682 CGACGAAGGAAAAAGGAACAGGCCTCGGTTTGATGGTCACCTTCAATATC 1731
BSNT_02342___ 1735 ATTGAAAACCATCAGGGAGTTATACATGTGGACAGCCATCCTGAAAAAGG 1784
||.|||||.||..|.|||...||..|.||.||||||.|..|.||||||||
BL03576___kin 1732 ATCGAAAATCACAACGGAACCATCGAAGTCGACAGCAAAGCAGAAAAAGG 1781
BSNT_02342___ 1785 CACAGCGTTTAAAATTTCATTTCCAAAAAATAAAACAACGGCTTAA 1830
|||..|.|||||.|||..|||||| |||||||
BL03576___kin 1782 CACGACATTTAAGATTCTATTTCC--AAAATAA------------- 1812
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