Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02331 and BL03569
See
Amino acid alignment /
Visit
BSNT_02331 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence dna-align/BSNT_02331___ptsI.1.5803.seq
# -bsequence dna-align/BL03569___ptsI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02331___ptsI-BL03569___ptsI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02331___ptsI-BL03569___ptsI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02331___ptsI
# 2: BL03569___ptsI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1728
# Identity: 1399/1728 (81.0%)
# Similarity: 1399/1728 (81.0%)
# Gaps: 24/1728 ( 1.4%)
# Score: 5687.0
#
#
#=======================================
BSNT_02331___ 1 ATGCAAGAATTAAAAGGGATTGGCGCTTCAGCCGGCATCGCGATTGCAAA 50
||||..|||||||||||.||.||||||||||||||.||.|||||||||||
BL03569___pts 1 ATGCTTGAATTAAAAGGAATAGGCGCTTCAGCCGGTATTGCGATTGCAAA 50
BSNT_02331___ 51 AGCATACCGGCTTGAAGAGCCAGATTTAACGGTTGAAAAGAAAAACATCT 100
||||||.||||||||.|||||.|||.||||||||||||||||||||||||
BL03569___pts 51 AGCATATCGGCTTGAGGAGCCTGATCTAACGGTTGAAAAGAAAAACATCT 100
BSNT_02331___ 101 CTGATTCTGAAGCGGAAGTAAGCCGTTTTGATGAAGCGATTGCACGTTCA 150
||||||||||.||||||||||..||||||||.||.||.||.|..|||||.
BL03569___pts 101 CTGATTCTGATGCGGAAGTAAATCGTTTTGAAGACGCCATCGAGCGTTCT 150
BSNT_02331___ 151 AAAGAAGAGCTCGAAAAAATCAAAGAGCACGCTTTGAAAGAACTGGGTCA 200
||..|||||||.||||..||.|||.|.||.|||||||||||.||.||..|
BL03569___pts 151 AAGAAAGAGCTTGAAACCATTAAAAACCATGCTTTGAAAGAGCTTGGCGA 200
BSNT_02331___ 201 GGATAAAGCTGATATTTTTTCTGCTCACCTTTTAGTTCTCAGTGACCCTG 250
.||||||||.||.||.||||||||.||..|.|||||..|.||.||.||||
BL03569___pts 201 AGATAAAGCGGAAATCTTTTCTGCACATTTGTTAGTATTAAGCGATCCTG 250
BSNT_02331___ 251 AGCTTCTGAACCCTGTGAAAGAAAAAATCAGCACTGATTCAGTGAACGCT 300
|.||..|.|||||..|.|||||.|||||||...|||||||.||.||.||.
BL03569___pts 251 AACTGTTAAACCCGATTAAAGACAAAATCAAATCTGATTCTGTCAATGCG 300
BSNT_02331___ 301 GAATTCGCTTTAAAAGAAACGTCTTCTATGTTCGTTACCATGTTTGAATC 350
|||||||||||||||||||||.|....||||||||.||||||||.||.||
BL03569___pts 301 GAATTCGCTTTAAAAGAAACGGCCGACATGTTCGTCACCATGTTCGAGTC 350
BSNT_02331___ 351 TATGGACAACGAATATATGAAAGAGCGTGCGGCAGATATCCGCGATGTAA 400
.||||||||.||||||||||||||.||.||.||.||.|||||||||||.|
BL03569___pts 351 GATGGACAATGAATATATGAAAGAACGCGCCGCGGACATCCGCGATGTCA 400
BSNT_02331___ 401 CAAAACGCGTAACCGGCCACCTGCTTGGCGTGGAAATTCCAAACCCAAGC 450
|.||.||.||.||.||.||.||.||.|||||.||.|||||.||.||.|||
BL03569___pts 401 CCAAGCGTGTCACAGGGCATCTTCTCGGCGTTGAGATTCCGAATCCGAGC 450
BSNT_02331___ 451 ATGATCTCAGAAGAGGTTATTATTGTAGCTGAAGACTTAACACCGTCTGA 500
.||||.||.|||||.||.||.||.||.||.||||||||.|||||||||||
BL03569___pts 451 CTGATTTCCGAAGAAGTCATCATCGTGGCCGAAGACTTGACACCGTCTGA 500
BSNT_02331___ 501 CACAGCCCAATTAAACCGTGAGTTCGTAAAAGGATTCACTACTGATATCG 550
.|||||.|||||||||||..|.||.||||||||.||.||.||.|||||||
BL03569___pts 501 TACAGCGCAATTAAACCGCAACTTTGTAAAAGGGTTTACAACAGATATCG 550
BSNT_02331___ 551 GCGGACGCACATCTCACTCTGCCATCATGGCACGTTCTCTTGAGATTCCG 600
|||||||.||.||.|||||||||||||||||.||.||.|||||.||||||
BL03569___pts 551 GCGGACGGACGTCCCACTCTGCCATCATGGCGCGCTCGCTTGAAATTCCG 600
BSNT_02331___ 601 GCAGTTGTTGGAACGAAAGCGGCTAC---AGGCACGATCCAAAACGGCGT 647
||.|||||.||.||.||||||||.|| |||| ||||||||||||||
BL03569___pts 601 GCCGTTGTCGGCACAAAAGCGGCAACGAAAGGC---ATCCAAAACGGCGT 647
BSNT_02331___ 648 GACTGTTATCGTTGACGGTATCAATGGCGATGTCATTATTGACCCATCTG 697
.||.||||||||||||||.|||||||||||||||||..||||.||.||..
BL03569___pts 648 AACAGTTATCGTTGACGGCATCAATGGCGATGTCATCGTTGATCCTTCCC 697
BSNT_02331___ 698 CGGAAACTGTAAAAGAGTATGAAGAAAAACATAATGCTTATTTGGCTCAA 747
.||||||..|.|..||.||.||||||||.|||.|.||.|...||||.|||
BL03569___pts 698 AGGAAACAATCAGCGAATACGAAGAAAAGCATCAAGCCTTCCTGGCGCAA 747
BSNT_02331___ 748 AAAGCTGAGTGGGCGAAGCTTGTCAATGAACCGACTGTCTCAAAAGATGG 797
|||||.||.|||||.|||||||||||.|||||||||||..|.|..||.||
BL03569___pts 748 AAAGCCGAATGGGCAAAGCTTGTCAACGAACCGACTGTAACGAGCGACGG 797
BSNT_02331___ 798 ACATCATGTAGAGCTTGCAGCGAACATCGGTACTCCTGATGATGTAAAAG 847
.|||||.||.||.|||||.||.||.||||||||.||||||||||||||||
BL03569___pts 798 CCATCACGTGGAACTTGCCGCTAATATCGGTACACCTGATGATGTAAAAG 847
BSNT_02331___ 848 GTGTTCTTGAAAACGGCGGAGAAGCAGTTGGCCTTTACCGTACAGAATTC 897
|.|||.|.|||||.||.|||||||||||.|||||||||||.||.||.|||
BL03569___pts 848 GCGTTTTGGAAAATGGAGGAGAAGCAGTCGGCCTTTACCGAACTGAGTTC 897
BSNT_02331___ 898 CTTTACATGGGAAGAGATCAGCTGCCTACAGAAGATGAGCAGTTTGATGC 947
|||||||||||.|||||.|||||.||.||||||||.|||||.||||||||
BL03569___pts 898 CTTTACATGGGCAGAGACCAGCTTCCGACAGAAGAGGAGCAATTTGATGC 947
BSNT_02331___ 948 TTACAAAACGGTTCTTGAGCGTATGGAAGGAAAATCAGTCGTCGTGCGGA 997
.||.|||||.||||||||||||||||||||.|||||.||.|||||.||.|
BL03569___pts 948 CTATAAAACCGTTCTTGAGCGTATGGAAGGCAAATCCGTTGTCGTTCGTA 997
BSNT_02331___ 998 CACTTGATATCGGCGGAGACAAAGAGCTTCCTTACCTGCAGCTTCCTAAA 1047
|.|||||||||||||||||||||||||||||.||..|..|.||.||.|||
BL03569___pts 998 CTCTTGATATCGGCGGAGACAAAGAGCTTCCATATTTAGAACTGCCAAAA 1047
BSNT_02331___ 1048 GAAATGAACCCGTTCCTGGGATATAGAGCGATTCGTCTTTGCCTTGAAGA 1097
||||||||.||.|||.|.|||||.||||||||.||||||||||||||.||
BL03569___pts 1048 GAAATGAATCCTTTCTTAGGATACAGAGCGATCCGTCTTTGCCTTGATGA 1097
BSNT_02331___ 1098 GCAAGAAATCTTCAGAACACAGCTTCGCGCGCTGCTTCGTGCAAGTACAT 1147
||||||.||.||||||||.||||||||.|||||||||||.||||||||||
BL03569___pts 1098 GCAAGAGATTTTCAGAACGCAGCTTCGTGCGCTGCTTCGGGCAAGTACAT 1147
BSNT_02331___ 1148 ACGGAAACTTGAAAATCATGTTCCCTATGATTGCGACAGTTAACGAATTC 1197
|.||||||||.|||||.||||||||||||||.|||||.||.||||||||.
BL03569___pts 1148 ATGGAAACTTAAAAATTATGTTCCCTATGATCGCGACTGTAAACGAATTT 1197
BSNT_02331___ 1198 AAAGAAGCAAAAGCGATCCTTCTTGAAGAGAAAGAAAAGCTCGTAAAAGC 1247
||||.|||.||||||||.|||.|.|||||.|||||||||| |.|||||
BL03569___pts 1198 AAAGCAGCGAAAGCGATTCTTTTAGAAGAAAAAGAAAAGC---TGAAAGC 1244
BSNT_02331___ 1248 GGGACAGGC-----TGTATCTGACGATATTGAAGTCGGAATGATGGTTGA 1292
.| .|||| .||.||.|||||.|||||||||||.|||||||||||
BL03569___pts 1245 TG--AAGGCCAACAAGTTTCCGACGACATTGAAGTCGGTATGATGGTTGA 1292
BSNT_02331___ 1293 GATTCCGTCAACTGCAGTCATCGCTGATCAGTTTGCTAAAGAGGTTGATT 1342
.||.||.|||||.||.||||||||||||||.|||||||||||.||.||||
BL03569___pts 1293 AATCCCTTCAACAGCGGTCATCGCTGATCAATTTGCTAAAGAAGTCGATT 1342
BSNT_02331___ 1343 TCTTCAGTATCGGAACAAACGATTTGATCCAATACACAATGGCAGCTGAC 1392
|||||||.||||||||.||.||..||||.||||||||.|||||.||||||
BL03569___pts 1343 TCTTCAGCATCGGAACGAATGACCTGATTCAATACACGATGGCTGCTGAC 1392
BSNT_02331___ 1393 CGTATGAATGAACGTGTATCTTACCTGTATCAGCCATACAACCCGGCAAT 1442
||.||||||||.||.||||||||.||.||.|||||||||||.||.||.||
BL03569___pts 1393 CGGATGAATGAGCGGGTATCTTATCTTTACCAGCCATACAATCCTGCGAT 1442
BSNT_02331___ 1443 CCTTCGCTTAATTACACTGGTAATTGAAGCAGCACACAAAGAAGGAAAAT 1492
.||.|||.|.||.||.||.||.||||||||.||.||.|||||||||||||
BL03569___pts 1443 TCTCCGCCTGATCACGCTTGTCATTGAAGCGGCTCATAAAGAAGGAAAAT 1492
BSNT_02331___ 1493 GGGTTGGCATGTGCGGAGAAATGGCAGGAGACGAGATTGCGATTCCAATC 1542
||||.|||||||||||.||||||||.|||||.||.||||||||.||.|||
BL03569___pts 1493 GGGTCGGCATGTGCGGCGAAATGGCGGGAGATGAAATTGCGATCCCGATC 1542
BSNT_02331___ 1543 CTTCTCGG-CTTAGGCTTAGATGAGTTCTCAATGAGCGCAACGTCTATCC 1591
||.||.|| ||| ||.||.||.||||||||||||||.||.|||||.||||
BL03569___pts 1543 CTGCTGGGTCTT-GGATTGGACGAGTTCTCAATGAGTGCGACGTCAATCC 1591
BSNT_02331___ 1592 TTCCGGCAAGAACACAAATCAGCAAATTGTCTAAACAAGAAGCTGAGTCA 1641
|.|||||||||||.|||||||||||..|.||||||.||||..|.||.||.
BL03569___pts 1592 TGCCGGCAAGAACGCAAATCAGCAAGCTTTCTAAAAAAGAGACAGAATCG 1641
BSNT_02331___ 1642 TTCAAAGAGAAAATCTTATCTATGAGCACGACAGAAGAAGTTGTCGCGTT 1691
|||||||||.||||..|.|||||||||||.||||||||.|||||....||
BL03569___pts 1642 TTCAAAGAGCAAATTCTGTCTATGAGCACAACAGAAGAGGTTGTACAATT 1691
BSNT_02331___ 1692 CGTAAAAGAAACATTCAA------GTAA 1713
||||||||||||.||||| .|||
BL03569___pts 1692 CGTAAAAGAAACCTTCAACCTGGCATAA 1719
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.