Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02330 and BL03568

See Amino acid alignment / Visit BSNT_02330 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence dna-align/BSNT_02330___ptsH.1.5803.seq
#    -bsequence dna-align/BL03568___ptsH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02330___ptsH-BL03568___ptsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02330___ptsH-BL03568___ptsH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02330___ptsH
# 2: BL03568___ptsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     231/267 (86.5%)
# Similarity:   231/267 (86.5%)
# Gaps:           0/267 ( 0.0%)
# Score: 1011.0
# 
#
#=======================================

BSNT_02330___      1 ATGGCACAAAAAACATTTAAAGTAACTGCAGATTCTGGAATCCATGCTCG     50
                     ||||||||||||||.|||||||||||||||||||||||||||||.|||||
BL03568___pts      1 ATGGCACAAAAAACGTTTAAAGTAACTGCAGATTCTGGAATCCACGCTCG     50

BSNT_02330___     51 TCCTGCGACAGTTCTTGTTCAAACTGCTAGCAAATACGACGCTGACGTTA    100
                     |||.|||||.||||||||.|||||.||.||||||||.||.||.||..|||
BL03568___pts     51 TCCAGCGACTGTTCTTGTACAAACAGCAAGCAAATATGATGCAGATATTA    100

BSNT_02330___    101 ATTTAGAATATAACGGCAAAACAGTTAACCTTAAATCTATTATGGGTGTT    150
                     ||||.|||||||||||.||||||||.||||||||||||||||||||.|||
BL03568___pts    101 ATTTGGAATATAACGGAAAAACAGTAAACCTTAAATCTATTATGGGCGTT    150

BSNT_02330___    151 ATGTCTTTAGGTATCGCTAAAGGCGCTGAGATCACAATCTCTGCTTCCGG    200
                     |||||..|||||||.||.|||||.|||||.|||||.||.|||||||||||
BL03568___pts    151 ATGTCACTAGGTATTGCCAAAGGTGCTGAAATCACGATTTCTGCTTCCGG    200

BSNT_02330___    201 AGCTGACGAAAACGATGCTCTTAACGCTTTAGAAGAAACAATGAAAAGCG    250
                     .|||||.|||||.|||||||||..|||..|.|||||||||||||||||||
BL03568___pts    201 CGCTGATGAAAATGATGCTCTTTCCGCACTTGAAGAAACAATGAAAAGCG    250

BSNT_02330___    251 AAGGACTCGGCGAGTAA    267
                     ||||..|.|||||.|||
BL03568___pts    251 AAGGTTTAGGCGAATAA    267


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.