Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02328 and BL03564

See Amino acid alignment / Visit BSNT_02328 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence dna-align/BSNT_02328___glcT.1.5803.seq
#    -bsequence dna-align/BL03564___glcT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02328___glcT-BL03564___glcT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02328___glcT-BL03564___glcT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02328___glcT
# 2: BL03564___glcT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity:     644/882 (73.0%)
# Similarity:   644/882 (73.0%)
# Gaps:          51/882 ( 5.8%)
# Score: 2324.0
# 
#
#=======================================

BSNT_02328___      1 ATGACAAAGGAGCTGAGGATCGTGAATGGGTCCTTCACAGTGAAAAAGGT     50
                                          |||||..|.|||||.||.||..|||||||
BL03564___glc      1 ---------------------GTGAACAGATCCTTTACCGTTGAAAAGGT     29

BSNT_02328___     51 ACTGAATAATAACGTATTAATTGCTTCT-CATCATAAATACAGCGAAGTC     99
                     |||.||.||.|||||.|||||.|| ||| |||.||.|.|||||.|||||.
BL03564___glc     30 ACTCAACAACAACGTTTTAATCGC-TCTCCATGATGATTACAGAGAAGTT     78

BSNT_02328___    100 GTTTTAATCGGAAAAGGTATTGGTTTCGGAAAAAAACAAGATGATGTCAT    149
                     ||.||.||.||.|||||.||.|||||.||.|||||.|..|..|||.|.||
BL03564___glc     79 GTCTTGATTGGCAAAGGAATCGGTTTTGGTAAAAAGCGCGGAGATCTTAT    128

BSNT_02328___    150 TGAAGATAAAGGCTACGATAAAATGTTCATTTTAAAAGACGAGAAGGAAC    199
                     .|||.||.|...||||||.||||||||.||..|..||.|.||.|||||||
BL03564___glc    129 CGAACATGAGAACTACGAAAAAATGTTTATCCTGGAAAATGATAAGGAAC    178

BSNT_02328___    200 AAAAGCAATTTAAAAAGCTCCTTGAC-TATGTTGATGAAAAGCTCGTTGA    248
                     ||..|||.|.|||.||||||| |.|| |||||.||||||||..|.|||||
BL03564___glc    179 AATCGCAGTATAAGAAGCTCC-TCACTTATGTCGATGAAAAAATGGTTGA    227

BSNT_02328___    249 TATTTCAAACGATGTCATCTATCACAT-----AAGAAATAGGACTAATCA    293
                     |||..|.||.|||||||||||.||.||     ||.||||.||     .||
BL03564___glc    228 TATCGCCAATGATGTCATCTACCATATCGCGCAAAAAATCGG-----CCA    272

BSNT_02328___    294 CTCATTAAATGAACATATTCACATTGCGTTGACAGACCATATCGCATTTG    343
                     ..|..|.||.|||||.|||||..|.||..||||.||||||||||||||||
BL03564___glc    273 GCCGCTGAACGAACACATTCATGTCGCCCTGACGGACCATATCGCATTTG    322

BSNT_02328___    344 CGATCAAAAGGC-AGCAGCAGGGATTTGATATGAAAAATCCATTTCTAAT    392
                     |..|.||..|.| || |..||||||||||||||||||||||.|||.|..|
BL03564___glc    323 CAGTTAAGCGTCTAG-AAAAGGGATTTGATATGAAAAATCCGTTTTTGCT    371

BSNT_02328___    393 GGAGACTCAGTCACTATATCCTGAGGAGTACCAAATTGCCAAAGAAGTCA    442
                     .|||||..|.||.||.|||||..||||.|||.||.|.|||||.||||.|.
BL03564___glc    372 TGAGACGGAATCGCTTTATCCGAAGGAATACGAAGTCGCCAAGGAAGCCG    421

BSNT_02328___    443 TAGATATGATCAATGAAAAAGCGGGAAT----CTGCCTTCCGGAAGGGGA    488
                     |.||||||||.|||||||||.|.|..||    ||||||    |||||.||
BL03564___glc    422 TCGATATGATTAATGAAAAATCCGACATTCAGCTGCCT----GAAGGTGA    467

BSNT_02328___    489 GATTGGTTTTATCGCTCTGCATATCCATTCA--GCATTGACAAACCGTCC    536
                     .||.||.||.|||||.||.||||||||  ||  ||..||||||||||.||
BL03564___glc    468 AATCGGGTTCATCGCGCTTCATATCCA--CAGTGCGATGACAAACCGCCC    515

BSNT_02328___    537 GCTGTCCGAGGTCAATCAGCACTCTCAGCTCATGGCGCA-GCTTGTCGAG    585
                     |||.||.||.|||||||||||.||.||.||.||..| || |||||||.||
BL03564___glc    516 GCTTTCTGAAGTCAATCAGCATTCACAACTGATCTC-CAGGCTTGTCCAG    564

BSNT_02328___    586 GTGATTGAAGACTCATTTCAAATGAAAGTAAATAAGGAAAGTGTCAACTA    635
                     ||.||.|||||.|||||.||.|||.||||.||.|.||||||.||.|||||
BL03564___glc    565 GTCATCGAAGATTCATTCCAGATGCAAGTCAACAGGGAAAGCGTGAACTA    614

BSNT_02328___    636 TTTGCGGCTGATCAGGCATATCAGATTTACAATAGAAAGAATTAAAAAAG    685
                     ||||||||||||||||||..|..|.|||||.||.||.||.||.|||...|
BL03564___glc    615 TTTGCGGCTGATCAGGCACTTGCGCTTTACGATTGACAGGATAAAACGGG    664

BSNT_02328___    686 AAGAACCGACTAAAGAACCAGAAAAATTAATGTTGTTATTGAAAAATGAA    735
                     |.||.||||.|.|.|||||.|||||||||||||||||.|||||||..|||
BL03564___glc    665 ACGAGCCGATTCAGGAACCGGAAAAATTAATGTTGTTGTTGAAAACGGAA    714

BSNT_02328___    736 TATCCGCTATGCTACAATACAGCTTGGAAATTGATTAAAATCTTGCAGCA    785
                     ||||||||.||.||||||||.||||||||..||||.||.|||||||||||
BL03564___glc    715 TATCCGCTGTGTTACAATACTGCTTGGAAGATGATCAAGATCTTGCAGCA    764

BSNT_02328___    786 AACATTGAAGAAACCAGTTCATGAGGCGGAAGCGGTTTATCTGACGCTTC    835
                     |.|..|.||||||||.|||||||||||.|||||.||||||.||||..|.|
BL03564___glc    765 AGCGCTCAAGAAACCGGTTCATGAGGCAGAAGCCGTTTATTTGACATTGC    814

BSNT_02328___    836 ATCTGTACCGATTAACCAATAAAATTTCATAA    867
                     ||.|||||||.||.||.|||||||||||||||
BL03564___glc    815 ATTTGTACCGTTTGACTAATAAAATTTCATAA    846


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