Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02328 and BL03564
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence dna-align/BSNT_02328___glcT.1.5803.seq
# -bsequence dna-align/BL03564___glcT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02328___glcT-BL03564___glcT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02328___glcT-BL03564___glcT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02328___glcT
# 2: BL03564___glcT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity: 644/882 (73.0%)
# Similarity: 644/882 (73.0%)
# Gaps: 51/882 ( 5.8%)
# Score: 2324.0
#
#
#=======================================
BSNT_02328___ 1 ATGACAAAGGAGCTGAGGATCGTGAATGGGTCCTTCACAGTGAAAAAGGT 50
|||||..|.|||||.||.||..|||||||
BL03564___glc 1 ---------------------GTGAACAGATCCTTTACCGTTGAAAAGGT 29
BSNT_02328___ 51 ACTGAATAATAACGTATTAATTGCTTCT-CATCATAAATACAGCGAAGTC 99
|||.||.||.|||||.|||||.|| ||| |||.||.|.|||||.|||||.
BL03564___glc 30 ACTCAACAACAACGTTTTAATCGC-TCTCCATGATGATTACAGAGAAGTT 78
BSNT_02328___ 100 GTTTTAATCGGAAAAGGTATTGGTTTCGGAAAAAAACAAGATGATGTCAT 149
||.||.||.||.|||||.||.|||||.||.|||||.|..|..|||.|.||
BL03564___glc 79 GTCTTGATTGGCAAAGGAATCGGTTTTGGTAAAAAGCGCGGAGATCTTAT 128
BSNT_02328___ 150 TGAAGATAAAGGCTACGATAAAATGTTCATTTTAAAAGACGAGAAGGAAC 199
.|||.||.|...||||||.||||||||.||..|..||.|.||.|||||||
BL03564___glc 129 CGAACATGAGAACTACGAAAAAATGTTTATCCTGGAAAATGATAAGGAAC 178
BSNT_02328___ 200 AAAAGCAATTTAAAAAGCTCCTTGAC-TATGTTGATGAAAAGCTCGTTGA 248
||..|||.|.|||.||||||| |.|| |||||.||||||||..|.|||||
BL03564___glc 179 AATCGCAGTATAAGAAGCTCC-TCACTTATGTCGATGAAAAAATGGTTGA 227
BSNT_02328___ 249 TATTTCAAACGATGTCATCTATCACAT-----AAGAAATAGGACTAATCA 293
|||..|.||.|||||||||||.||.|| ||.||||.|| .||
BL03564___glc 228 TATCGCCAATGATGTCATCTACCATATCGCGCAAAAAATCGG-----CCA 272
BSNT_02328___ 294 CTCATTAAATGAACATATTCACATTGCGTTGACAGACCATATCGCATTTG 343
..|..|.||.|||||.|||||..|.||..||||.||||||||||||||||
BL03564___glc 273 GCCGCTGAACGAACACATTCATGTCGCCCTGACGGACCATATCGCATTTG 322
BSNT_02328___ 344 CGATCAAAAGGC-AGCAGCAGGGATTTGATATGAAAAATCCATTTCTAAT 392
|..|.||..|.| || |..||||||||||||||||||||||.|||.|..|
BL03564___glc 323 CAGTTAAGCGTCTAG-AAAAGGGATTTGATATGAAAAATCCGTTTTTGCT 371
BSNT_02328___ 393 GGAGACTCAGTCACTATATCCTGAGGAGTACCAAATTGCCAAAGAAGTCA 442
.|||||..|.||.||.|||||..||||.|||.||.|.|||||.||||.|.
BL03564___glc 372 TGAGACGGAATCGCTTTATCCGAAGGAATACGAAGTCGCCAAGGAAGCCG 421
BSNT_02328___ 443 TAGATATGATCAATGAAAAAGCGGGAAT----CTGCCTTCCGGAAGGGGA 488
|.||||||||.|||||||||.|.|..|| |||||| |||||.||
BL03564___glc 422 TCGATATGATTAATGAAAAATCCGACATTCAGCTGCCT----GAAGGTGA 467
BSNT_02328___ 489 GATTGGTTTTATCGCTCTGCATATCCATTCA--GCATTGACAAACCGTCC 536
.||.||.||.|||||.||.|||||||| || ||..||||||||||.||
BL03564___glc 468 AATCGGGTTCATCGCGCTTCATATCCA--CAGTGCGATGACAAACCGCCC 515
BSNT_02328___ 537 GCTGTCCGAGGTCAATCAGCACTCTCAGCTCATGGCGCA-GCTTGTCGAG 585
|||.||.||.|||||||||||.||.||.||.||..| || |||||||.||
BL03564___glc 516 GCTTTCTGAAGTCAATCAGCATTCACAACTGATCTC-CAGGCTTGTCCAG 564
BSNT_02328___ 586 GTGATTGAAGACTCATTTCAAATGAAAGTAAATAAGGAAAGTGTCAACTA 635
||.||.|||||.|||||.||.|||.||||.||.|.||||||.||.|||||
BL03564___glc 565 GTCATCGAAGATTCATTCCAGATGCAAGTCAACAGGGAAAGCGTGAACTA 614
BSNT_02328___ 636 TTTGCGGCTGATCAGGCATATCAGATTTACAATAGAAAGAATTAAAAAAG 685
||||||||||||||||||..|..|.|||||.||.||.||.||.|||...|
BL03564___glc 615 TTTGCGGCTGATCAGGCACTTGCGCTTTACGATTGACAGGATAAAACGGG 664
BSNT_02328___ 686 AAGAACCGACTAAAGAACCAGAAAAATTAATGTTGTTATTGAAAAATGAA 735
|.||.||||.|.|.|||||.|||||||||||||||||.|||||||..|||
BL03564___glc 665 ACGAGCCGATTCAGGAACCGGAAAAATTAATGTTGTTGTTGAAAACGGAA 714
BSNT_02328___ 736 TATCCGCTATGCTACAATACAGCTTGGAAATTGATTAAAATCTTGCAGCA 785
||||||||.||.||||||||.||||||||..||||.||.|||||||||||
BL03564___glc 715 TATCCGCTGTGTTACAATACTGCTTGGAAGATGATCAAGATCTTGCAGCA 764
BSNT_02328___ 786 AACATTGAAGAAACCAGTTCATGAGGCGGAAGCGGTTTATCTGACGCTTC 835
|.|..|.||||||||.|||||||||||.|||||.||||||.||||..|.|
BL03564___glc 765 AGCGCTCAAGAAACCGGTTCATGAGGCAGAAGCCGTTTATTTGACATTGC 814
BSNT_02328___ 836 ATCTGTACCGATTAACCAATAAAATTTCATAA 867
||.|||||||.||.||.|||||||||||||||
BL03564___glc 815 ATTTGTACCGTTTGACTAATAAAATTTCATAA 846
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