Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02307 and BL03547
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02307___ykvK.1.5803.seq
# -bsequence dna-align/BL03547___queD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02307___ykvK-BL03547___queD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02307___ykvK-BL03547___queD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02307___ykvK
# 2: BL03547___queD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 341/466 (73.2%)
# Similarity: 341/466 (73.2%)
# Gaps: 50/466 (10.7%)
# Score: 1162.0
#
#
#=======================================
BSNT_02307___ 1 -TTGTTATCTCAAATTTATCCGCAGGCCCAG-CATCCTTATTCGTTTGAA 48
|..||| |.|||||||||||||| .||.|| ||||||||.||.||||||
BL03547___que 1 GTGCTTA-CACAAATTTATCCGCA-ACCAAGCCATCCTTACTCTTTTGAA 48
BSNT_02307___ 49 CTGAATAAGGACATGCATATCTCAGCCGCTCATTTTATCCCTCGGGAAAG 98
.|.|||||.||.|||||.||.|||||.||.||||||||.| ||.||.||
BL03547___que 49 TTAAATAAAGATATGCAAATGTCAGCTGCACATTTTATTC--CGAGAGAG 96
BSNT_02307___ 99 --TGCGGGAGCGTGCAGCAGGGTTCACGGACATACGTATACCGTAAATAT 146
|||.||.||.||||||||.||.||.||.|||||||||||..|.|||||
BL03547___que 97 GATGCAGGCGCATGCAGCAGAGTCCATGGGCATACGTATACAATCAATAT 146
BSNT_02307___ 147 AACCGTTGCCGGCGACGAACTTGACGAT---TCAGGCTTTCTTGTCAATT 193
.||..|||||||.||.| |.|||| || |||||.||.||||||||.|
BL03547___que 147 TACGATTGCCGGGGATG-AGTTGA--ATGCATCAGGTTTCCTTGTCAACT 193
BSNT_02307___ 194 TCAGCGTAC--TCAAAAAACTGGTGCACGGAAACTATGATCACACGCTAT 241
||||| || |.||||||.||.|.||||||.|.||.|||||.|||||.|
BL03547___que 194 TCAGC--ACCATTAAAAAATTGATCCACGGAGAATACGATCATACGCTTT 241
BSNT_02307___ 242 TAAATGATCATGAAGATTTTTCTCAGG---ACGACCGGTAT----TCGCT 284
|||||||||||.|.||.||| ||||| |.|..||| || ||.||
BL03547___que 242 TAAATGATCATCAGGAATTT--TCAGGTGAAAGCGCGG-ATCGGATCCCT 288
BSNT_02307___ 285 GCCGACAACTGAAGTCGTGGCGAAAACGATTTATGACAACGTACAGGCTT 334
.||||| |||||||||||.|||||||||||.||.||.|||.||||||
BL03547___que 289 -TCGACA---GAAGTCGTGGCCAAAACGATTTACGATAAAGTAGAGGCTT 334
BSNT_02307___ 335 ATTT---AGA-CACTTTGGAGAATAAGCCGACC----TGTGTACAGGTGT 376
|||| ||| |.| ||.|| |||.|| ||.||.|||||||
BL03547___que 335 ATTTGAAAGATCTC-------AACAA-CCGTCCGCATTGCGTCCAGGTGT 376
BSNT_02307___ 377 TTGTCCGTGAAACACCGACAAGCTACTGT-GTCTACCGTCCGAAGAAGGG 425
|||||.|.|||||.||||||||||| ||| ||.|||||||||||...|||
BL03547___que 377 TTGTCAGGGAAACGCCGACAAGCTA-TGTCGTGTACCGTCCGAAACCGGG 425
BSNT_02307___ 426 TGGTTTGAATGGCTAA 441
||.|..|.||||||||
BL03547___que 426 TGTTCAGCATGGCTAA 441
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