Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02306 and BL03546
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02306___ykvJ.1.5803.seq
# -bsequence dna-align/BL03546___queC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02306___ykvJ-BL03546___queC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02306___ykvJ-BL03546___queC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02306___ykvJ
# 2: BL03546___queC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 663
# Identity: 517/663 (78.0%)
# Similarity: 517/663 (78.0%)
# Gaps: 6/663 ( 0.9%)
# Score: 1993.5
#
#
#=======================================
BSNT_02306___ 1 ATGAAAAAAGAAAAAGCAATTGTCGTATTTAGCGGCGGTCAAGACAGCAC 50
||||||.|.||||||||.||.||||||||.|||||||||||.|||||.||
BL03546___que 1 ATGAAACAGGAAAAAGCGATCGTCGTATTCAGCGGCGGTCAGGACAGTAC 50
BSNT_02306___ 51 AACATGCTTATTGTGGGC-CTTAAAAG--AATTCGAAGAAGTCGAAACGG 97
.||.|||.|||||||||| ||| .| ||||..|.||.||.||..|||
BL03546___que 51 GACTTGCCTATTGTGGGCGCTT---CGGCAATTTCAGGAGGTGGAGGCGG 97
BSNT_02306___ 98 TGACTTTTCATTATAATCAGCGACATTCGCAGGAAATTGAAGTGGCTAAA 147
|.||.|||||.|||||||||||.||...|||||||||.|||||.||.|||
BL03546___que 98 TCACGTTTCAATATAATCAGCGGCACAAGCAGGAAATCGAAGTCGCGAAA 147
BSNT_02306___ 148 TCCATTGCGGAAAAGCTTGGTGTGAAAAATCATTTGCTTGATATGTCACT 197
...||.||.|.|||||||||.||.||..||||..|.|||||||||..|||
BL03546___que 148 AAGATCGCTGCAAAGCTTGGCGTCAAGCATCACCTTCTTGATATGGAACT 197
BSNT_02306___ 198 TTTAAATCAGCTTGCACCGAATGCCCTGACAAGAAATGATATTGAGATAG 247
.|||||||||||.||.||||||||..|||||||..|||||||.|||||.|
BL03546___que 198 GTTAAATCAGCTCGCGCCGAATGCTTTGACAAGGGATGATATCGAGATTG 247
BSNT_02306___ 248 AAGTAAAAGACGGAGAACTGCCATCCACATTCGTCCCTGGCCGCAATTTG 297
|.|..|||||.||.||.||.||.|||||.||.||.||.||.|||||..|.
BL03546___que 248 AGGCGAAAGAAGGCGAGCTTCCGTCCACTTTTGTTCCGGGACGCAACCTC 297
BSNT_02306___ 298 GTATTCTTATCCTTTGCGTCTATCCTGGCTTTCCAAATTGGCGCGCGCCA 347
||.||.|||||.||.||.||.||||||||.|.|||..|.||||||||.||
BL03546___que 298 GTGTTTTTATCGTTCGCTTCGATCCTGGCCTACCAGGTCGGCGCGCGGCA 347
BSNT_02306___ 348 CATTATTACAGGAGTTTGCGAGACAGACTTCAGTGGTTATCCTGACTGCC 397
|||.||||||||.||.|||||||||||||||||.||.|||||.||.||||
BL03546___que 348 CATCATTACAGGCGTATGCGAGACAGACTTCAGCGGGTATCCGGATTGCC 397
BSNT_02306___ 398 GTGACGAATTCGTGAAATCTTGCAATGTCACGGTAAATCTGGCAATGGAG 447
||||.||.|||||.|||||.|||||||||||.||.||..||||.||||||
BL03546___que 398 GTGATGAGTTCGTCAAATCCTGCAATGTCACTGTCAACTTGGCGATGGAG 447
BSNT_02306___ 448 AAGCCGTTTGTGATCCACACGCCTCTCATGTGGCTCAATAAGGCGGAAAC 497
...||||||||.|||||.|||||.||.||||||||.||.|||||||||||
BL03546___que 448 CGCCCGTTTGTCATCCATACGCCGCTTATGTGGCTGAACAAGGCGGAAAC 497
BSNT_02306___ 498 GTGGAAGCTTGTAGATGAGCTTGGCGCGCTGGAGTTTGTAAAAAACAACA 547
||||.||||.|..||||||||||..|||||.||.||.||.||||||.|.|
BL03546___que 498 GTGGGAGCTCGCCGATGAGCTTGATGCGCTTGATTTCGTGAAAAACGAGA 547
BSNT_02306___ 548 CGCTGACATGCTATAACGGCATCATCGCCGACGGCTGCGGCGAATGTCCG 597
|||||||.|||||.|||||.|||||.||||||||||||||||||||.|||
BL03546___que 548 CGCTGACGTGCTACAACGGAATCATTGCCGACGGCTGCGGCGAATGCCCG 597
BSNT_02306___ 598 GCATGTCACCTTCGTTCAAAAGGTTATGAAGAATATATGATGATGAAAGG 647
||.||..|.|||||..||||.||.||..|.||||||||||..||||||..
BL03546___que 598 GCCTGCAAGCTTCGCGCAAACGGCTACAATGAATATATGAAAATGAAAAA 647
BSNT_02306___ 648 AGAGCGTGCATAA 660
.|||||.||.|||
BL03546___que 648 GGAGCGAGCTTAA 660
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