Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02296 and BL03544
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence dna-align/BSNT_02296___ykvE.1.5803.seq
# -bsequence dna-align/BL03544___ykvE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02296___ykvE-BL03544___ykvE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02296___ykvE-BL03544___ykvE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02296___ykvE
# 2: BL03544___ykvE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 331/466 (71.0%)
# Similarity: 331/466 (71.0%)
# Gaps: 38/466 ( 8.2%)
# Score: 1134.0
#
#
#=======================================
BSNT_02296___ 1 ATG-----------ACA-GAAAAATCACTGAAGTTATTTATCGTGCTGTC 38
||| ||| |||.|.||..|||||||||||||.||..|.||
BL03544___ykv 1 ATGAGTAATAGAGAACAGGAACAGTCCTTGAAGTTATTTATTGTATTATC 50
BSNT_02296___ 39 GCGCGCGTATCGGTCTATTAACGATCATATGAATAAGCATATTCATAAGC 88
.||.|||||..|.||.|||||.||||||||||||||.|||||||||.|.|
BL03544___ykv 51 TCGAGCGTACAGATCCATTAATGATCATATGAATAAACATATTCATCATC 100
BSNT_02296___ 89 ATGGGCTGAATCCGACTGAATTTGCTGTGCTAGAGCTTTTGTACCATAAA 138
||||.||||||||.||.||.|||||.||..||||.||..|.||.||||||
BL03544___ykv 101 ATGGTCTGAATCCAACCGAGTTTGCCGTTTTAGAACTCCTCTATCATAAA 150
BSNT_02296___ 139 GGCGATCAGCCGCTACAGCAGATAGGAGATAAAATTCTCTTGGCTAGCGG 188
||.||||||||.||.|||||.|||||.|||||.|||||..||||.|||||
BL03544___ykv 151 GGGGATCAGCCCCTTCAGCAAATAGGGGATAAGATTCTTCTGGCGAGCGG 200
BSNT_02296___ 189 GAGCATCACATACGTTGTAGATAAGCTGGAGCAAAAAGAACTTCTCATTC 238
|||.||.|||||.||.||.||.|||||.||||||||..|.||..||| |
BL03544___ykv 201 GAGTATTACATATGTGGTTGACAAGCTTGAGCAAAAGCAGCTGATCA--C 248
BSNT_02296___ 239 G-GAA-AGCGTCTCCTACAGACAGACGAGTGACATTTGCGCAAATTACTG 286
| ||| |||.|.|.|.||||||.|..|.|||||.|.||||||||||||.|
BL03544___ykv 249 GAGAAGAGCCTGTACGACAGACCGCAGGGTGACCTATGCGCAAATTACAG 298
BSNT_02296___ 287 AAAAAGGCATCGGTCTTTTGAATGATATTTTCCCTGATCACGCTGCTGAA 336
|.|||||||.||..||..|..|..|.|||||.||.|.||| |||.|||
BL03544___ykv 299 ATAAAGGCACCGAGCTCCTCGAGAAGATTTTTCCGGGTCA---TGCAGAA 345
BSNT_02296___ 337 ATTGA--TG----AAATGATCAGCGTATTAAGCGAAGAAGAGGTAGAGAT 380
|| || |.||||||||||||||||||||.||.||| |.|||.
BL03544___ykv 346 ---GAGCTGCACAACATGATCAGCGTATTAAGCGATGAGGAG--AAAGAA 390
BSNT_02296___ 381 G--TGCACCGAAATGTTAAAAAGAGTAGGATTAAACGCAAAACAGTTTCA 428
| ||||.|||||||.|.||||.|||.|||.|.||.||||.|.|..||.|
BL03544___ykv 391 GCCTGCATCGAAATGCTGAAAAAAGTCGGACTGAATGCAAGAAATATTTA 440
BSNT_02296___ 429 T------AATAAGTAA 438
| ||..|||||
BL03544___ykv 441 TAAGGGCAAAGAGTAA 456
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