Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02290 and BL03542
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence dna-align/BSNT_02290___ykrZ.1.5803.seq
# -bsequence dna-align/BL03542___mtnZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02290___ykrZ-BL03542___mtnZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02290___ykrZ-BL03542___mtnZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02290___ykrZ
# 2: BL03542___mtnZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity: 413/553 (74.7%)
# Similarity: 413/553 (74.7%)
# Gaps: 29/553 ( 5.2%)
# Score: 1502.0
#
#
#=======================================
BSNT_02290___ 1 ATGGCTACAATTCGAATTCATGATGAGGCAAATACAACGATTGAAAATCA 50
|||||.||||||||.||.||||||||...|||.||.|..||||||||.||
BL03542___mtn 1 ATGGCGACAATTCGGATCCATGATGAACAAAACACGAGCATTGAAAACCA 50
BSNT_02290___ 51 AGAGGAAGTGG--CAAGCTTTCTGGACAGTCAAGAGGTTATTTATGAGCA 98
.||.|||||.| ||| |||||..|..|.||.|||||.||||||||..|
BL03542___mtn 51 GGAAGAAGTAGAACAA--TTTCTAAAGCGGCAGGAGGTCATTTATGAAAA 98
BSNT_02290___ 99 ATGGGATATCATGAAGCTTCCGG--------AACATCTCTCAGAGAAATA 140
.||||||||||..||.||.|||| || .||.|||||
BL03542___mtn 99 GTGGGATATCACAAAACTGCCGGCCGGTTTAAA--------GGAAAAATA 140
BSNT_02290___ 141 TGACCTGACAGAAGAAGAAAAACAGCAAATTCTTGATACCTTCGAAACTG 190
.||..||||.||.|||||.||||||.|.|||.|.||...|||.|...|||
BL03542___mtn 141 CGATTTGACCGATGAAGAGAAACAGGAGATTTTAGACGTCTTTGCCGCTG 190
BSNT_02290___ 191 AAATTAAAGATATCTCAACCCGCCGCGGCTATAAAGCACAG-GATGTTAT 239
||||.|||||.||.|||...||||||||||||||||| .|| |||||.||
BL03542___mtn 191 AAATCAAAGACATTTCAGAACGCCGCGGCTATAAAGC-GAGCGATGTCAT 239
BSNT_02290___ 240 TTCATTGTCAGACAGCAATCCGAAACTTGATGAACTGCTTG-AAAACTTT 288
.||..|.||.|||...|||||||||||.|||||.|| .||| |||||||.
BL03542___mtn 240 CTCGCTTTCCGACCAAAATCCGAAACTCGATGAGCT-TTTGAAAAACTTC 288
BSNT_02290___ 289 AAA-AGAGAGCATCACCATACAGACGATGAGGTTCGTTTTATTGTAAGCG 337
||| || ||||||||.||||||||||||||.||..|.|||||.||.||||
BL03542___mtn 289 AAACAG-GAGCATCATCATACAGACGATGAAGTCAGGTTTATCGTCAGCG 337
BSNT_02290___ 338 GACACGGTATTTTTGTCATTCAAGGCAAGGACGGCACGTTTTTTGATGTC 387
|.|||||.||.||||..||..||||.||.||||||||.||||||||||||
BL03542___mtn 338 GCCACGGCATCTTTGCGATAGAAGGAAAAGACGGCACATTTTTTGATGTC 387
BSNT_02290___ 388 CGTTTAAACCCTGGAGATTTAATCTCCGTGCCTGAGAATATCCGCCATTA 437
|.||||||.||.||.|||||.|||||.||.|||||.||.|.|||||||||
BL03542___mtn 388 CTTTTAAATCCGGGGGATTTGATCTCTGTTCCTGAAAACACCCGCCATTA 437
BSNT_02290___ 438 CTTCACGCTTCAGGAGGACCGCAAAGTTGTCGCGGTGAGAATTTTTGTCA 487
.||||||||||||||.|||||.|||||.||.||.||.|||||.|||||.|
BL03542___mtn 438 TTTCACGCTTCAGGAAGACCGGAAAGTCGTGGCTGTCAGAATCTTTGTGA 487
BSNT_02290___ 488 CAACTGAAGGCTGGGTTCCGATTTATGAAAAAGACAGCGTGAATCA---A 534
|.||.||.||||||||.|||||||||||||||||.|..|||||.|| |
BL03542___mtn 488 CGACAGAGGGCTGGGTGCCGATTTATGAAAAAGAGAATGTGAACCAGTCA 537
BSNT_02290___ 535 TAA 537
|||
BL03542___mtn 538 TAA 540
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