Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02279 and BL03537
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence dna-align/BSNT_02279___ogt.1.5803.seq
# -bsequence dna-align/BL03537___ogt.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02279___ogt-BL03537___ogt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02279___ogt-BL03537___ogt.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02279___ogt
# 2: BL03537___ogt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity: 332/561 (59.2%)
# Similarity: 332/561 (59.2%)
# Gaps: 126/561 (22.5%)
# Score: 1004.0
#
#
#=======================================
BSNT_02279___ 1 ------------------ATGAACTACTATACGACAGCCGAGACGCCGCT 32
||||.|| ||||..|
BL03537___ogt 1 GTGGGCTTTTATATTGAAATGACCT------------------CGCCTTT 32
BSNT_02279___ 33 CGGTGAA-CTTATCATTGCCGAAGAGGAGGACCGGATCACTCGT---CTA 78
.||..|| |.|| |||.|.|||.||..|..|||..||.||.|.| |||
BL03537___ogt 33 TGGACAAGCCTA-CATCGTCGAGGAAAATAACCATATTACACATTTGCTA 81
BSNT_02279___ 79 TTTCTCAGTCAGGAAGATTGGGTGGATTGGAAAG--------AAAC-GGT 119
||| ||| |||| |||| |.|
BL03537___ogt 82 TTT---------GAA---------------AAAGAAGAACTAAAACAGCT 107
BSNT_02279___ 120 TCAGAATACTGAGCACAAG-----------------------GAAAC--A 144
||| ||||| ||||| |
BL03537___ogt 108 TCA-----------ACAAGACGGCCTGGAGCTTCGCCCGGCCGAAACGGA 146
BSNT_02279___ 145 CCTAATCTTGCA-GAAGCGAAACAACAGCTTCAAGAATATTTCGCA-GGC 192
|.|.|||.| ||.||.||.|..|||||..||||||||||| || ||.
BL03537___ogt 147 ---ATTGTTGAAGGAGGCAAAGCGCCAGCTCGAAGAATATTTC-CAGGGG 192
BSNT_02279___ 193 GAAAGGAAGACATTCTCCCTGCCGCTCAGCCAAAAGGGCACTCCTTTTCA 242
||..||||.||.|||.||||.||.|||.||||..|.||.||.||.|||||
BL03537___ogt 193 GAGCGGAAAACGTTCACCCTTCCTCTCCGCCAGGATGGAACCCCGTTTCA 242
BSNT_02279___ 243 GCAAAAAGTGTGGCAGGCGCTGGAGAGGATTCCATATGGCGAATCCCGAA 292
|.||||.||||||.||||||||.||..|||.||.||.||.|||||.||.|
BL03537___ogt 243 GAAAAAGGTGTGGGAGGCGCTGCAGTCGATCCCGTACGGTGAATCACGGA 292
BSNT_02279___ 293 GCTATGCGGATATTGCCGC-TGCG--GTCGGCAGTCCGAAAGCGGTGCGC 339
|||||...||.|| ||| |||| |||||.|.||||||||||||||||
BL03537___ogt 293 GCTATTTAGACAT---CGCATGCGCCGTCGGGAATCCGAAAGCGGTGCGC 339
BSNT_02279___ 340 GCTGTCGGGCAGGCTAATAAACGTAACGACCTGCCGATTTTTGTCCCGTG 389
||..||||.||.||.||||||.|.||.|..|||||||||||..|||||||
BL03537___ogt 340 GCAATCGGCCAAGCCAATAAAAGAAATGCGCTGCCGATTTTGATCCCGTG 389
BSNT_02279___ 390 CCACAGAGTGATCGGCAAAAACAGTGCGTTAACAGGATACGCCGGAAGCA 439
||||.|.||.|||||||||||..||.|.||.||.||.||..||||||...
BL03537___ogt 390 CCACCGTGTCATCGGCAAAAATCGTTCATTGACGGGGTATTCCGGAAATG 439
BSNT_02279___ 440 AAACGGAGATCAAAGCATTTTTGCTAAACATCGAGCGAATCT--CCTATA 487
|||||||.|..|||||..|..||||..||||||| .|||.| |.||||
BL03537___ogt 440 AAACGGATAAAAAAGCGGTGCTGCTCGACATCGA--AAATATTGCGTATA 487
BSNT_02279___ 488 AAGAAAAATAA 498
|||.|||||||
BL03537___ogt 488 AAGGAAAATAA 498
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