Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02264 and BL03529
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence dna-align/BSNT_02264___sigI.1.5803.seq
# -bsequence dna-align/BL03529___sigI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02264___sigI-BL03529___sigI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02264___sigI-BL03529___sigI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02264___sigI
# 2: BL03529___sigI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 766
# Identity: 597/766 (77.9%)
# Similarity: 597/766 (77.9%)
# Gaps: 20/766 ( 2.6%)
# Score: 2303.0
#
#
#=======================================
BSNT_02264___ 1 GTGAAACCAGTGCTTAGCCTTTTGTTTAAATTGGGAAAAAAGAAGCAAAC 50
|||||||||||||||||||||||||||||....|||||||.|||.|||.|
BL03529___sig 1 GTGAAACCAGTGCTTAGCCTTTTGTTTAAGACAGGAAAAAGGAAACAATC 50
BSNT_02264___ 51 ACTTGAAAAAGCTGTTGAGAGTATACAAAAAGGCAATAAAGATCTGCAAA 100
|.|.|||.|..||||....||.|||||||||||.|||.|..|..||||||
BL03529___sig 51 ATTAGAAGAGTCTGTAATAAGCATACAAAAAGGAAATCAGCAGTTGCAAA 100
BSNT_02264___ 101 ATGAATTAATACAGCAATATAAGCCATTTATCGCAAAGACGGTTTCATCC 150
|.||..|.||..|.|||||||||||.|||.|.||.||.||||||||||||
BL03529___sig 101 ACGAGCTTATCGATCAATATAAGCCTTTTGTGGCTAAAACGGTTTCATCC 150
BSNT_02264___ 151 GTTTGTAAACGATATATAGATGAAAAAGACGATGAGTTCAGTATTGGACT 200
||.||.|||||||||||||||||||||||.|||||.|||||.||.||..|
BL03529___sig 151 GTGTGCAAACGATATATAGATGAAAAAGATGATGAATTCAGCATCGGCTT 200
BSNT_02264___ 201 GATCGCGTTTAATGAAGCTATAGAAAAATATTCACCTGAAAAAGGAAATT 250
|||.||.||.||||||||.||.|||||||||||..|.||.||||||||||
BL03529___sig 201 GATTGCATTCAATGAAGCCATTGAAAAATATTCTTCAGATAAAGGAAATT 250
BSNT_02264___ 251 CTCTGCTCGCATTTGCTGAGCTTATTATAAAAAGAAAAGTCATTGATTAC 300
|||||||.||||||||.|||||.||.||.||..|.||||||||||||||.
BL03529___sig 251 CTCTGCTTGCATTTGCAGAGCTGATCATTAAGCGCAAAGTCATTGATTAT 300
BSNT_02264___ 301 ATTAGAAAAGAAGCCAGAAGCGCACAAAATATAAATATCGATTTACAGGA 350
||.|||||||||||.||||..||.||.||.||.|||||.||..|.||.||
BL03529___sig 301 ATCAGAAAAGAAGCGAGAAATGCCCAGAACATCAATATGGACATGCAAGA 350
BSNT_02264___ 351 AGGAGACGATCAGGAGTCATCACAAAGCCTGATTGAAGCCGAGCTTTCCA 400
||||||.||.|||||.||.||.||||||.||||||||||.||||||||||
BL03529___sig 351 AGGAGAAGAACAGGAATCCTCCCAAAGCATGATTGAAGCGGAGCTTTCCA 400
BSNT_02264___ 401 TTGATGAATACCGCCGTCA-GATTGAACAGGAGCAGAGGCGGGAGGAAAT 449
||.||||||.|..||| || |.|.|||||||||||.|||||||||||.||
BL03529___sig 401 TTCATGAATTCAACCG-CATGCTCGAACAGGAGCAAAGGCGGGAGGAGAT 449
BSNT_02264___ 450 CCTCTATTTTCAAAAGCA--GCTCAAGGATTATGGTTTATCGTTTAAAGA 497
.|||.||||| ||||.| |||.||...||.|||..|.||.|||...||
BL03529___sig 450 TCTCCATTTT--AAAGAAAGGCTTAAAAGTTTTGGCCTGTCTTTTTCCGA 497
BSNT_02264___ 498 ACTGCTTGAAAATTCTCCAAAGCACACGGATGCAAGGCAAAACGCCATAA 547
..||||.||..||||.||.||.||.|||||||||||||||||||||||.|
BL03529___sig 498 TTTGCTGGAGCATTCCCCGAAACATACGGATGCAAGGCAAAACGCCATCA 547
BSNT_02264___ 548 AGGTGGCA-ATGACGCTTGTTGAACATGAAGAATT------GGCCGCTAT 590
|.|||||| || ||||||||.|||||||||||||| | ||
BL03529___sig 548 AAGTGGCATAT-ACGCTTGTCGAACATGAAGAATTAAAAAAG------AT 590
BSNT_02264___ 591 CCTGTATACAAAGAAGCAGCTTCCGGTCAAACAGCTTGAACAGCTTGTCT 640
|.|||.|..|||||||||||||||.|||||||||||||||.|||||||..
BL03529___sig 591 CTTGTTTGAAAAGAAGCAGCTTCCCGTCAAACAGCTTGAAAAGCTTGTGG 640
BSNT_02264___ 641 CTGTAAGCCGAAAAACGATTGAGAGAAACAGAAAATATATTATTGCGATG 690
||||.|||.|||||||..|.|||||||||.|.||||||||.||.||.|||
BL03529___sig 641 CTGTCAGCAGAAAAACCGTAGAGAGAAACCGCAAATATATCATCGCTATG 690
BSNT_02264___ 691 TGTATTATCATTACGGGTGATTATATTTATTTAAAAGATTATCTTAAAGG 740
...||.||.||.|||||.||||||.||||..|.|||||||||||.|||||
BL03529___sig 691 GCGATCATTATAACGGGCGATTATGTTTACCTTAAAGATTATCTAAAAGG 740
BSNT_02264___ 741 GGTGCTGCACTCATGA 756
||||||..|.||||||
BL03529___sig 741 GGTGCTCAATTCATGA 756
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