Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02818 and BL03495

See Amino acid alignment / Visit BSNT_02818 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence dna-align/BSNT_02818.1.5803.seq
#    -bsequence dna-align/BL03495.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02818-BL03495.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02818-BL03495.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02818
# 2: BL03495
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 458
# Identity:     343/458 (74.9%)
# Similarity:   343/458 (74.9%)
# Gaps:          40/458 ( 8.7%)
# Score: 1309.5
# 
#
#=======================================

BSNT_02818         1 TTGCACCCAAAACAAATTTGTTCCGA-------TTTAGAGGTATTGGGCT     43
                     .||||||||||||||||||||...||       |||       ||.||.|
BL03495            1 ATGCACCCAAAACAAATTTGTGAAGACCTTGCCTTT-------TTAGGTT     43

BSNT_02818        44 CTCGTTTGGTTCTTGATGGAAACGATCTATATATTGAGAAACCAGAGAAA     93
                     |.|.|||.|||||.|||||..|.||.||.|||||||||.|.||.|||||.
BL03495           44 CACCTTTAGTTCTGGATGGGGATGACCTTTATATTGAGCATCCGGAGAAC     93

BSNT_02818        94 GTCTATCCGGAACTTGAGGCGTTTGTCCAATCTTACAAAAAGCGAATTAT    143
                     ||||||||.|||||||.||..|||||.||.||..|.|||||.||.||.||
BL03495           94 GTCTATCCAGAACTTGTGGAATTTGTTCAGTCACATAAAAAACGGATCAT    143

BSNT_02818       144 TCGGTATTTGAAAGGCGAATACTCGGATCATGAACATAATGTGAAACAAA    193
                     .|.||||||.|||||.||||||||.|..||.||.|||||.||.|||||.|
BL03495          144 CCAGTATTTAAAAGGTGAATACTCAGTGCAGGATCATAAAGTCAAACAGA    193

BSNT_02818       194 CTATAGATAAAATCATTAACTATTTCATGGGCATTGATCAAGAAATAAAT    243
                     |.||.|||||||||||.||.|||||.||||||||.|||||||||||.|||
BL03495          194 CCATTGATAAAATCATCAATTATTTTATGGGCATAGATCAAGAAATGAAT    243

BSNT_02818       244 AGAAAAATAGATGACTGGTTCAATCATGATT---ATG----AATCAGTTA    286
                     ..|||||||||.|||||||||||||||||.|   |||    |||||    
BL03495          244 CCAAAAATAGACGACTGGTTCAATCATGAGTGGGATGCGGCAATCA----    289

BSNT_02818       287 TGAAG--GTGATGGAATTGCTTGTTCTCTTTTGGGAGAACGGCTGGAGGG    334
                       |||  |.||   .||||||||||||.||||||||||||||||||||.|
BL03495          290 --AAGCCGCGA---GATTGCTTGTTCTATTTTGGGAGAACGGCTGGAGAG    334

BSNT_02818       335 AGCTAAAGGAA----TCCGTTTCAAACTTTGAAAGTGAGGAAACGGACCG    380
                     |.||    |||    ||||||.|.||.|||||...|||.|||||||||..
BL03495          335 ATCT----GAACAGCTCCGTTGCGAATTTTGAGGATGAAGAAACGGACAA    380

BSNT_02818       381 GCTTTCCATAGAAATCTATGATCGGGCCATGTCGTATTTTAAGGGGAAGA    430
                     .||.||..|||||||||||||..|||||||||||||.|||||||||||||
BL03495          381 ACTCTCTTTAGAAATCTATGAAAGGGCCATGTCGTACTTTAAGGGGAAGA    430

BSNT_02818       431 AAGCATGA    438
                     ||||||||
BL03495          431 AAGCATGA    438


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