Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02818 and BL03495
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_02818.1.5803.seq
# -bsequence dna-align/BL03495.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02818-BL03495.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02818-BL03495.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02818
# 2: BL03495
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 458
# Identity: 343/458 (74.9%)
# Similarity: 343/458 (74.9%)
# Gaps: 40/458 ( 8.7%)
# Score: 1309.5
#
#
#=======================================
BSNT_02818 1 TTGCACCCAAAACAAATTTGTTCCGA-------TTTAGAGGTATTGGGCT 43
.||||||||||||||||||||...|| ||| ||.||.|
BL03495 1 ATGCACCCAAAACAAATTTGTGAAGACCTTGCCTTT-------TTAGGTT 43
BSNT_02818 44 CTCGTTTGGTTCTTGATGGAAACGATCTATATATTGAGAAACCAGAGAAA 93
|.|.|||.|||||.|||||..|.||.||.|||||||||.|.||.|||||.
BL03495 44 CACCTTTAGTTCTGGATGGGGATGACCTTTATATTGAGCATCCGGAGAAC 93
BSNT_02818 94 GTCTATCCGGAACTTGAGGCGTTTGTCCAATCTTACAAAAAGCGAATTAT 143
||||||||.|||||||.||..|||||.||.||..|.|||||.||.||.||
BL03495 94 GTCTATCCAGAACTTGTGGAATTTGTTCAGTCACATAAAAAACGGATCAT 143
BSNT_02818 144 TCGGTATTTGAAAGGCGAATACTCGGATCATGAACATAATGTGAAACAAA 193
.|.||||||.|||||.||||||||.|..||.||.|||||.||.|||||.|
BL03495 144 CCAGTATTTAAAAGGTGAATACTCAGTGCAGGATCATAAAGTCAAACAGA 193
BSNT_02818 194 CTATAGATAAAATCATTAACTATTTCATGGGCATTGATCAAGAAATAAAT 243
|.||.|||||||||||.||.|||||.||||||||.|||||||||||.|||
BL03495 194 CCATTGATAAAATCATCAATTATTTTATGGGCATAGATCAAGAAATGAAT 243
BSNT_02818 244 AGAAAAATAGATGACTGGTTCAATCATGATT---ATG----AATCAGTTA 286
..|||||||||.|||||||||||||||||.| ||| |||||
BL03495 244 CCAAAAATAGACGACTGGTTCAATCATGAGTGGGATGCGGCAATCA---- 289
BSNT_02818 287 TGAAG--GTGATGGAATTGCTTGTTCTCTTTTGGGAGAACGGCTGGAGGG 334
||| |.|| .||||||||||||.||||||||||||||||||||.|
BL03495 290 --AAGCCGCGA---GATTGCTTGTTCTATTTTGGGAGAACGGCTGGAGAG 334
BSNT_02818 335 AGCTAAAGGAA----TCCGTTTCAAACTTTGAAAGTGAGGAAACGGACCG 380
|.|| ||| ||||||.|.||.|||||...|||.|||||||||..
BL03495 335 ATCT----GAACAGCTCCGTTGCGAATTTTGAGGATGAAGAAACGGACAA 380
BSNT_02818 381 GCTTTCCATAGAAATCTATGATCGGGCCATGTCGTATTTTAAGGGGAAGA 430
.||.||..|||||||||||||..|||||||||||||.|||||||||||||
BL03495 381 ACTCTCTTTAGAAATCTATGAAAGGGCCATGTCGTACTTTAAGGGGAAGA 430
BSNT_02818 431 AAGCATGA 438
||||||||
BL03495 431 AAGCATGA 438
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