Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02817 and BL03493
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_02817.1.5803.seq
# -bsequence dna-align/BL03493.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02817-BL03493.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02817-BL03493.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02817
# 2: BL03493
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2473
# Identity: 1878/2473 (75.9%)
# Similarity: 1878/2473 (75.9%)
# Gaps: 110/2473 ( 4.4%)
# Score: 7148.0
#
#
#=======================================
BSNT_02817 1 ATGTACGACTTTAAAAATATACCGCAAGAGCTAAAAAACGCCCCTCAGTG 50
||||||||.||||||||.||||||||||||||||||||||||||||||||
BL03493 1 ATGTACGAATTTAAAAACATACCGCAAGAGCTAAAAAACGCCCCTCAGTG 50
BSNT_02817 51 GATTTTATGGCGTTCGGAAGAGCGTAACGGCAAAAAAACGAAAGTGCCAT 100
|||||||||||||||.|||||.|||.||||.||.|||||.||||||||.|
BL03493 51 GATTTTATGGCGTTCCGAAGAACGTGACGGTAAGAAAACAAAAGTGCCGT 100
BSNT_02817 101 ATCAGATTGACGGCAGCATGGCTCAATCAAGCAATAAGCGAACATGGTCC 150
|.||||||||||||||||||||||||||.||.|||||..||||.|||||.
BL03493 101 ACCAGATTGACGGCAGCATGGCTCAATCCAGTAATAAAAGAACCTGGTCG 150
BSNT_02817 151 ACCTTTGCCACTATCATGAAGTTTTTCAATGAACAGGAGTATGACGGCAT 200
||.||..|.||..|..||||.||.|..||.||.|..||.||||||||.||
BL03493 151 ACATTCCCGACCGTTTTGAAATTCTATAACGATCGAGATTATGACGGGAT 200
BSNT_02817 201 CGGTTTCATGTTTTCTAAAGATGATCCGTTCATCGGAATAGATATAGATC 250
|||.|||||||||||.||||||||||||||||||||.|||||.|||||||
BL03493 201 CGGCTTCATGTTTTCAAAAGATGATCCGTTCATCGGCATAGACATAGATC 250
BSNT_02817 251 ACTGTGTAAATGACGGTGTTCTATCTCCTTTCGCCCAGGAAATCATCCAG 300
|.|||||..|.||||||||..|.||.||.|||||..||||||||.|.|||
BL03493 251 ATTGTGTGGAGGACGGTGTCTTGTCCCCATTCGCTGAGGAAATCGTTCAG 300
BSNT_02817 301 ACGATCAGCAGCTATACTGAATACTCTCCAAGTGGCGAAGGTGTTCATAT 350
.|.||.|||||.||.||.|||||.||.||.||.|||.||||.||.||.||
BL03493 301 GCCATTAGCAGTTACACCGAATATTCACCCAGCGGCAAAGGAGTCCACAT 350
BSNT_02817 351 TATCGCGAAAGGCAAGCTCCCATTACGCGGACCGGGCACAGGGAGAAAAA 400
.|||.|.|||||.|||.|||||||.||.||.|||||||||||.||.||||
BL03493 351 CATCACAAAAGGTAAGATCCCATTGCGGGGGCCGGGCACAGGTAGGAAAA 400
BSNT_02817 401 ATATAGATAAAGGCCTGGAAGTATACAGGCATGGCCGGTATTTCACATTC 450
||...||....||.||||||||||||.|.||||||||.||||||||.||.
BL03493 401 ATCCTGAACTTGGGCTGGAAGTATACCGCCATGGCCGTTATTTCACCTTT 450
BSNT_02817 451 ACCGGGAACAGTCTTGATGTTGGACCTGTTCAGGAACGATCAGAAGAAAT 500
|||||.||.|||||.|...|.||..|.|||.|.||||||.|.||.||..|
BL03493 451 ACCGGCAATAGTCTCGGGATCGGGGCCGTTGAAGAACGAACGGACGAGCT 500
BSNT_02817 501 CAAAACTATCTTT--GATAAGTACCTGACAG----AGAAGGAAGAAGCAA 544
|||| .|.|||| ||.||.||..||| || |.||.||||||.|.|
BL03493 501 CAAA--GAGCTTTTCGAGAAATATTTGA-AGGATAAAAAAGAAGAATCGA 547
BSNT_02817 545 AACCGGTCAGCACCCGAACAC-------AATCAGCAAGCGATATAAGCAA 587
||| |..||.|||.| ..|||.|..|.|||||.|||||
BL03493 548 AAC-------CTTCCAAACTCCCTGCTGCTTCATCCCGTGATATGAGCAA 590
BSNT_02817 588 TCTTTCAAATAAAGAAATTTGGGAAAGAATGTTCAATAGTAAAAACGGAA 637
.||.||.|||||.||.||.||||||||.||||||||.||.||.|||||.|
BL03493 591 CCTCTCTAATAAGGAGATATGGGAAAGGATGTTCAACAGCAAGAACGGGA 640
BSNT_02817 638 AAAGCATTCAGGAGCTGTTTAACGGCCAGCTGATTAATGGCGATCACTCT 687
|.|||||||||||.|||||||||||.||.|||||.||||..||||||||.
BL03493 641 AGAGCATTCAGGATCTGTTTAACGGTCATCTGATAAATGATGATCACTCG 690
BSNT_02817 688 TCCACAGATATGGCTTTATGTAATCACTTGGCATTCTGGACGGACAAGGA 737
.||||||||||||||||.||||||||.|||||||||||||||||.|||||
BL03493 691 GCCACAGATATGGCTTTGTGTAATCATTTGGCATTCTGGACGGATAAGGA 740
BSNT_02817 738 CGCATCAAAAATGGATTCCATGTTTCGCGAATCAGGTTTGTTCCGCGAAA 787
..|..|||||||||||||.||||||||||||||||||||||||||.||.|
BL03493 741 TCCCGCAAAAATGGATTCAATGTTTCGCGAATCAGGTTTGTTCCGGGAGA 790
BSNT_02817 788 AGTGGGATCAGCAGCATTCAGCTGATGGGGCTACATATGGAGAAATGACT 837
|.|||||||.||||||||||.|.|||||.||||||||||||||||||||.
BL03493 791 AATGGGATCGGCAGCATTCATCCGATGGCGCTACATATGGAGAAATGACC 840
BSNT_02817 838 ATTGCTGCAGCTATCTACTCGACTGGTCCCACAATATCAGACTTGATGGA 887
|||||.||.||..|.||.||.|||..|.|.|||||.||.||.|||.||||
BL03493 841 ATTGCCGCGGCCGTTTATTCTACTCATACGACAATTTCTGATTTGCTGGA 890
BSNT_02817 888 A---CAGCAAGAGCAGCCGTATGAAGTGTATTTCTCGCAGCCGCAGGCCT 934
| |||||.||.||||||||||||.|.|||.|.||.||.||..|....|
BL03493 891 AGAGCAGCAGGAACAGCCGTATGAAATATATATTTCCCATCCCGAAAATT 940
BSNT_02817 935 CACATGTTGCTGACACAGAGGAAATCATAGACACGCCACCGGTTTTTCAT 984
|.||.||||..||.||.||.||.|||||.|||||.||.||||..||||||
BL03493 941 CTCAAGTTGAGGATACCGAAGAGATCATTGACACTCCGCCGGCGTTTCAT 990
BSNT_02817 985 CTGACTGAGCTAGGGAACGCTGAAAGGCTTGTATATTATCATGGCAAGAA 1034
.||||.|||||.||.|||||||||.|..||||.||.||.||.||.|||||
BL03493 991 TTGACGGAGCTCGGCAACGCTGAACGAATTGTCTACTACCACGGAAAGAA 1040
BSNT_02817 1035 TATCAGATACTGTAACGAGCTCGACTGGTTAATCTGGAACGGGAAGATGT 1084
|||..||||.|||||||||||.||||||.|.|||||||||||.|||...|
BL03493 1041 TATTCGATATTGTAACGAGCTTGACTGGCTGATCTGGAACGGCAAGCGAT 1090
BSNT_02817 1085 GGGAGGAAGACAGCAAGAGGCAGATCGAGGCATTAACTGCCCAAACCCTT 1134
||||.|||||||||||..||.|.||.||.||..|.||.|||.|.||..|.
BL03493 1091 GGGAAGAAGACAGCAAACGGAAAATTGAAGCTATCACCGCCAAGACATTA 1140
BSNT_02817 1135 CGGGCCATTTACGGGGAAGCGAAAGCCACGGAAGACGGCTACAGAAAAAA 1184
|||||..|.|||||.||.||.||.|||||.||||||...|.|.|||||||
BL03493 1141 CGGGCGTTGTACGGCGAGGCTAAGGCCACAGAAGACAAATTCCGAAAAAA 1190
BSNT_02817 1185 GCAGCTTAACGATTGGGCTAAAAAATGTGAGCGTCGAAATATTCGAATGA 1234
||||||.|||||||||||.||.|||||.|||||.||.||.||.||.||||
BL03493 1191 GCAGCTGAACGATTGGGCGAAGAAATGCGAGCGCCGCAACATACGGATGA 1240
BSNT_02817 1235 ACACCATCCTGGATACCAGGCCGATGGTTGCTGTAAGAAAGCAAGATCTC 1284
||||.||..|.|||....||||.||||||.|.||.||.|||||.||.||.
BL03493 1241 ACACAATTTTAGATGTTCGGCCAATGGTTTCAGTGAGGAAGCAGGAACTG 1290
BSNT_02817 1285 GACTCTCATAAATATCTGTTTAATTGTGAGAATGGAGTGATTGACTTAAA 1334
||.||.||.||||||||.||||||||.||.||.||.|||||.||..||||
BL03493 1291 GATTCCCACAAATATCTTTTTAATTGCGATAACGGTGTGATCGATCTAAA 1340
BSNT_02817 1335 GACTGGTGAACTGCTGCCACATGACCGTGATTTTCTATTCACTAAAATTT 1384
.||.||.|||||.|||||.|||||.||.|||.|.||.|||||.|||||.|
BL03493 1341 AACAGGCGAACTTCTGCCGCATGATCGGGATCTGCTTTTCACGAAAATAT 1390
BSNT_02817 1385 C----ATCAGTAGCTTATCAAAAGGATGCCGACTGCCCAAACTGGAAGGC 1430
| ||| .|||||||||..||||||||||||||.||||||||..|
BL03493 1391 CTCCTATC----TCTTATCAAACTGATGCCGACTGCCCGAACTGGAAAAC 1436
BSNT_02817 1431 ATTCTTAGAAAGTATTTTTATAGATGAACAAGGTCA-GCCAAACTATGAA 1479
.|||||.||||||||||||||||||| ||.|||.|| |||||||||||||
BL03493 1437 TTTCTTGGAAAGTATTTTTATAGATG-ACCAGGGCACGCCAAACTATGAA 1485
BSNT_02817 1480 ATTATTAATTTTATGCAGAAAGCTATTGGCTATTCATTAACCGGGGATAC 1529
||||||.||||.|||||.||.||.|||||||||||..|.||||||||.||
BL03493 1486 ATTATTGATTTCATGCAAAAGGCAATTGGCTATTCGCTGACCGGGGACAC 1535
BSNT_02817 1530 TACGGAACAAGTCATGTTCTTTCTGTTTGGTAATGGCCGTAACGGTAAAT 1579
.||.|||||.||||||||||||||.|||||.|||||.||.||.|||||||
BL03493 1536 CACAGAACAGGTCATGTTCTTTCTATTTGGAAATGGTCGGAATGGTAAAT 1585
BSNT_02817 1580 CAACGTTTATCAATACAGTTCAGCAGCTGCTGGGCGACTATGGCCGGCAG 1629
||||.|||||||||||.||||||||.|||.|.||.||||||||.||||||
BL03493 1586 CAACTTTTATCAATACTGTTCAGCACCTGTTCGGGGACTATGGGCGGCAG 1635
BSNT_02817 1630 ACGAACAGTGACACATTCATAAAAAAGAAAAATGATAGCAGCATCAACAA 1679
||.|||||.|||||.||||||||.|||||||||||.|||..|||.|||||
BL03493 1636 ACAAACAGCGACACCTTCATAAAGAAGAAAAATGACAGCGCCATAAACAA 1685
BSNT_02817 1680 TGACATAGCCCGCCTCGACGGGGCGCGCTTTGTGTCGGCCGTTGAGAGTG 1729
||||||.|||.|..|.|||||.||.||.|||||||||||.||.|||||||
BL03493 1686 TGACATTGCCAGGTTGGACGGCGCCCGGTTTGTGTCGGCTGTCGAGAGTG 1735
BSNT_02817 1730 AAGAAGGTCAGCAGCTTTCCGAATCGTTGGTGAAGCAGATCACCGGGGGC 1779
||||.||.||||||||.||.|||||||||||||||||||||||.||.||.
BL03493 1736 AAGAGGGACAGCAGCTGTCTGAATCGTTGGTGAAGCAGATCACTGGCGGA 1785
BSNT_02817 1780 GAAAAGATGTCCGCGCG-ATTCTTACGCCAGGAGTATTTTGAGTTTACCC 1828
|||||||||||.||||| .||||| ||||||||.||.|||||||||||.|
BL03493 1786 GAAAAGATGTCAGCGCGTTTTCTT-CGCCAGGAATACTTTGAGTTTACAC 1834
BSNT_02817 1829 CAGAATTTAAAGTGTTCTTTACGACAAACCATAAACCAATCGTAAAGGGA 1878
|.|||||||||||.||||||||.||||||||||||||.|||||.||.||.
BL03493 1835 CGGAATTTAAAGTCTTCTTTACCACAAACCATAAACCGATCGTGAAAGGC 1884
BSNT_02817 1879 AGCGACGAGGGTATCTGGCGGCGTATCCGTCTTGTCCCGTTTACTGTCAC 1928
|||||.||.|||||.|||||.||.|||||.||..|.||||||||||||||
BL03493 1885 AGCGATGAAGGTATTTGGCGCCGGATCCGGCTGATTCCGTTTACTGTCAC 1934
BSNT_02817 1929 CATTCCGAAAGAGAAAGTGGACAAAAAGCTTCCGCAGAAACTTGCTGCAG 1978
.|||||.|||||.|||||.|||||.|||||.|||||||||||.|||||||
BL03493 1935 GATTCCAAAAGAAAAAGTAGACAAGAAGCTGCCGCAGAAACTGGCTGCAG 1984
BSNT_02817 1979 AAATGCCTGGTATTCTCAGGTGGGCAGTCGAAGGCTGCTTGAAGTGGCAG 2028
||||||||||.||.||..|.|||||.||.||.|||||.||||||||||||
BL03493 1985 AAATGCCTGGGATCCTTCGCTGGGCTGTTGAGGGCTGTTTGAAGTGGCAG 2034
BSNT_02817 2029 AAGGAAGGGCTTAAAGAACCAGAAGTGATCCGAAAAGCAACGGAAGGTTA 2078
||||||||.||...||||||.||||.||||...||.|||||.||.||.||
BL03493 2035 AAGGAAGGCCTGGGAGAACCGGAAGCGATCAAGAAGGCAACAGATGGCTA 2084
BSNT_02817 2079 CCGCGAGGATATGGATATATTAGGGCCGTATATGTCAGAAAGATGTGTTG 2128
.||.|||||||||||.||..|.||.||.|..|||..|||||||||
BL03493 2085 TCGGGAGGATATGGACATTCTCGGTCCATTCATGGAAGAAAGATG----- 2129
BSNT_02817 2129 TTCATCCCTCA-------GCAAAAATTGAAGCAAAAGAGCTCTATAAGGA 2171
|||||..|| ||.||..|.||.||.||.|||||||||||.||
BL03493 2130 --CATCCAACATCCGAAGGCCAAGGTAGAGGCCAAGGAGCTCTATAAAGA 2177
BSNT_02817 2172 TTACAAAAACTGGTGCTATGAAAATGATGAGATTGAACTCAAAAATCGTG 2221
|||||||.|||||||.|.|||||||||.||.||||||||.||.||.||.|
BL03493 2178 TTACAAAGACTGGTGTTTTGAAAATGACGAAATTGAACTGAAGAACCGGG 2227
BSNT_02817 2222 CTTTTTATAGACAAATTGAAATTCGAGGGTTTAAGAAGGAAAACGGAGCG 2271
||||||||.|.|||.|.||||||||.||.|||||.|| |.|.||..||.
BL03493 2228 CTTTTTATCGGCAACTCGAAATTCGTGGATTTAAAAA--ATATCGCGGCA 2275
BSNT_02817 2272 A----AAAATAAAGTCTTCTTTT-ATGGTATAGGGCTA--AACAAATATC 2314
| ||.|.||| ||.|||| ||||.||.||..|| ||.|.|.|.|
BL03493 2276 ACTATAACAAAAA---TTATTTTGATGGGATCGGTTTAATAAAAGAAAAC 2322
BSNT_02817 2315 AGAGCCACTTGAATTTTTCGGAAAGGGTTAACGAAGGGGTTAA------T 2358
.||| |.|||.|| |||...|||| |
BL03493 2323 CGAG--ATTTGCAT-------------------AAGCAATTAAATCCTTT 2351
BSNT_02817 2359 GAATCAAATGCAAACAGTGACTCC---------AAAAAG----GTTACTT 2395
|||.||.|.||| ||.||| |||||| ||.||..
BL03493 2352 GAAACAGAGGCA------GAATCCATCGGAATTAAAAAGTAATGTCACAA 2395
BSNT_02817 2396 CTATAAATAGAAAAAAGCTATAA 2418
.|||..|.||||||||..|||||
BL03493 2396 GTATTCAAAGAAAAAAATTATAA 2418
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