Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05089 and BL03484
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:12
# Commandline: needle
# -asequence dna-align/BSNT_05089___smpB.1.5803.seq
# -bsequence dna-align/BL03484___smpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05089___smpB-BL03484___smpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05089___smpB-BL03484___smpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05089___smpB
# 2: BL03484___smpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 390/474 (82.3%)
# Similarity: 390/474 (82.3%)
# Gaps: 3/474 ( 0.6%)
# Score: 1615.0
#
#
#=======================================
BSNT_05089___ 1 ATGCCAAAAGGGTCAGGAAAAGTATTATCTCAAAATAAGAAAGCCAATCA 50
||||||||.||...|||.||.||..|.||.||||||||.|||||.|||||
BL03484___smp 1 ATGCCAAAGGGAGAAGGGAAGGTTGTTTCCCAAAATAAAAAAGCAAATCA 50
BSNT_05089___ 51 CGATTATTTTATAGAAGAAACCTATGAAACAGGCATCGTTCTGCAAGGAA 100
|||||||||.|||||||||||.||.||||||||||||||.||.|||||||
BL03484___smp 51 CGATTATTTCATAGAAGAAACATACGAAACAGGCATCGTGCTTCAAGGAA 100
BSNT_05089___ 101 CCGAAATCAAATCGATTCGCGCCGGCCGCGTAAACCTTAAGGATTCCTTC 150
|.||||||||.||.|||||||||||.||.||.||..|.|||||..|.||.
BL03484___smp 101 CGGAAATCAAGTCCATTCGCGCCGGTCGGGTGAATTTAAAGGACGCGTTT 150
BSNT_05089___ 151 GCCAAAATCGAACGGGGAGAAGTGTTTCTCCACAATATGCACGTCAGCCC 200
||||||||.|||||.|||||||||||.|||||||||||||||.|||||||
BL03484___smp 151 GCCAAAATTGAACGCGGAGAAGTGTTCCTCCACAATATGCACATCAGCCC 200
BSNT_05089___ 201 ATATGAGCAGGGAAACCGCTATAACCATGATCCGCTTCGGACAAGAAAGC 250
.|||||||||||.||||||||.||||||||||||.|.||.||.|||||||
BL03484___smp 201 GTATGAGCAGGGGAACCGCTACAACCATGATCCGTTGCGAACGAGAAAGC 250
BSNT_05089___ 251 TGTTAATGCACCGCAAGGAGATTAATAAGCTGATCGGGTTAACAAAGGAA 300
|.||.||||||||||||.||||.||.||..|||||||.||.||.||.||.
BL03484___smp 251 TTTTGATGCACCGCAAGCAGATCAACAAATTGATCGGTTTGACGAAAGAG 300
BSNT_05089___ 301 AAAGGCTATTCTCTCGTTCCGCTGAAGCTGTATTTAAAAAACGGCTTTGC 350
.|.||.|||||.|||||.|||||.|||.|.|||||.||.||||||||.||
BL03484___smp 301 CAGGGATATTCGCTCGTACCGCTCAAGATTTATTTGAAGAACGGCTTCGC 350
BSNT_05089___ 351 CAAAGTGCTTCTCGGCCTTGGAAAAGGGAAGAAGAACTATGACAAACGGG 400
.||||||||.|||||.||.|||||||||||||||||.|..||||||||.|
BL03484___smp 351 AAAAGTGCTGCTCGGTCTCGGAAAAGGGAAGAAGAAGTTCGACAAACGCG 400
BSNT_05089___ 401 AAGATCTGAAGCGCAAGGACGCGAAGCGGGAAATCGAAAGAGCGTTCAGA 450
||||..||||||||||.|||||.||.||.||||||||||||||||||.|.
BL03484___smp 401 AAGACTTGAAGCGCAAAGACGCCAAACGCGAAATCGAAAGAGCGTTCCGC 450
BSNT_05089___ 451 GACAGTCAAAAAGGCT---TCTAA 471
|||||.|||||||||| |||||
BL03484___smp 451 GACAGGCAAAAAGGCTTGATCTAA 474
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