Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05114 and BL03477
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:13
# Commandline: needle
# -asequence dna-align/BSNT_05114___opuCD.1.5803.seq
# -bsequence dna-align/BL03477___opuCD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05114___opuCD-BL03477___opuCD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05114___opuCD-BL03477___opuCD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05114___opuCD
# 2: BL03477___opuCD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 683
# Identity: 536/683 (78.5%)
# Similarity: 536/683 (78.5%)
# Gaps: 13/683 ( 1.9%)
# Score: 2090.0
#
#
#=======================================
BSNT_05114___ 1 ATGGAAGTACTACAGCAGCTTGGCACATACTATTCGCAAAACGGCGGTTA 50
||||||||.||.|||||||||.|.||.||.||..|||||||||||||.||
BL03477___opu 1 ATGGAAGTGCTGCAGCAGCTTTGGACGTATTACGCGCAAAACGGCGGCTA 50
BSNT_05114___ 51 TGTGCTGCAGGAGTTTTACCGCCATTTTCTGATGTCGGTATACGGCGTTT 100
|||||||..|||.|||||||||||.|||.|.|||||||.|||||||||.|
BL03477___opu 51 TGTGCTGGGGGAATTTTACCGCCACTTTTTAATGTCGGCATACGGCGTAT 100
BSNT_05114___ 101 TATTTGCCGCCATTGTTGGAATTCCGCTCGGCATCCTGATAGCCAGATAC 150
|.||.||||||.|.||.||.||.|||..||||||..|.||.|||||||||
BL03477___opu 101 TGTTCGCCGCCGTCGTCGGCATCCCGGCCGGCATTTTCATCGCCAGATAC 150
BSNT_05114___ 151 AGAAGATTAAGCGGATGGGTTTTTGCGGTCACGAACGTCATTCAGACGAT 200
.|.|.|.|.|||..||||||.|||.|..||||.||.||||||||.|||.|
BL03477___opu 151 CGTAAAATCAGCAAATGGGTCTTTTCCATCACTAATGTCATTCAAACGGT 200
BSNT_05114___ 201 CCCGGCTCTCGCCATGCTTGCCGTGCTGATGCTTGTCATGGGGCTGGGCG 250
.|||||.||.||.|||||.|||||..|||||||||||||||||||.||||
BL03477___opu 201 TCCGGCGCTGGCGATGCTCGCCGTCTTGATGCTTGTCATGGGGCTCGGCG 250
BSNT_05114___ 251 CTAATACGGTGATATTGTCATTATTTCTGTATTCTCTTCTGCCGATTATC 300
|.||.||||||||..|.|||||.|||.|||||||.||..|||||||.||.
BL03477___opu 251 CAAACACGGTGATTCTTTCATTGTTTTTGTATTCGCTGTTGCCGATCATT 300
BSNT_05114___ 301 AGAAATACGTATACAGGGATTATCAGTATTGAGCACGCCTATCTTGAATC 350
.||||.||.|||||.||.||...|||.||.|||||.||||||||||||||
BL03477___opu 301 CGAAACACATATACGGGAATCGCCAGCATCGAGCATGCCTATCTTGAATC 350
BSNT_05114___ 351 CGGAAAAGCAATGGGGATGACAAAATTTCAAGTGCTGCGGATGGTCGAGC 400
.||.||.||.|||||.|||||.||||||||||||||.||||||||.||||
BL03477___opu 351 AGGGAAGGCGATGGGCATGACGAAATTTCAAGTGCTCCGGATGGTGGAGC 400
BSNT_05114___ 401 TTCCGCTTGCGCTT-TCGGTCATAATGGCCGGCCTGCGCACCGCGCTTGT 449
||||.||.|| ||| ||||||||.|||||.||.||..|.||||||||.||
BL03477___opu 401 TTCCCCTCGC-CTTGTCGGTCATTATGGCGGGGCTCAGAACCGCGCTCGT 449
BSNT_05114___ 450 CATTGCCATCGGCATTACGGCCATCGGGACATTTGTCGGTGCAGGCGGTC 499
|||.||.||||||||||||||||||||.||.||||||||.||||||||.|
BL03477___opu 450 CATCGCGATCGGCATTACGGCCATCGGCACGTTTGTCGGCGCAGGCGGCC 499
BSNT_05114___ 500 TCGGGGACATCATCGTCAGGGGATCAAACGCCACAAACGGAACCGCGATT 549
|||||||.|||||.|||||||||||||||||.||.||||||||.|||||.
BL03477___opu 500 TCGGGGATATCATTGTCAGGGGATCAAACGCGACCAACGGAACAGCGATC 549
BSNT_05114___ 550 ATATTAGCGGGAGCGATCCCCACAGCTCTGATGGCGGTGATTGCCGATTT 599
||..||||.||.||||||||.||.||.|||||||||.|.||.||||||.|
BL03477___opu 550 ATTCTAGCAGGCGCGATCCCGACGGCGCTGATGGCGATCATCGCCGATCT 599
BSNT_05114___ 600 GGTCATGGGCTGGCTTGAACGAGCATTAAGCCCGATTAA-------AAAG 642
|.|||||||.|||||.||.||.||..|.|||||..|||| ||||
BL03477___opu 600 GTTCATGGGATGGCTCGAGCGTGCGCTGAGCCCCGTTAAGCATCATAAAG 649
BSNT_05114___ 643 AGAAAGAAGAAAAATCTGGCAGGTGCCGCATAA 675
|.||||.|...|||| |.|.||||||.|||
BL03477___opu 650 -GCAAGACGCCGAATC---CGGATGCCGCTTAA 678
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