Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05131 and BL03467
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:14
# Commandline: needle
# -asequence dna-align/BSNT_05131___pgm.1.5803.seq
# -bsequence dna-align/BL03467___pgm.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05131___pgm-BL03467___pgm.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05131___pgm-BL03467___pgm.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05131___pgm
# 2: BL03467___pgm
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1550
# Identity: 1233/1550 (79.5%)
# Similarity: 1233/1550 (79.5%)
# Gaps: 28/1550 ( 1.8%)
# Score: 4862.0
#
#
#=======================================
BSNT_05131___ 1 ATGAGTAAAAAACCAGCTGCACTCATCATTCTTGATGGGTTCGGATTACG 50
||||||||.||...|||.||.|||||||||.|.||||||||.|||.||.|
BL03467___pgm 1 ATGAGTAACAAGTTAGCCGCGCTCATCATTTTAGATGGGTTTGGACTAAG 50
BSNT_05131___ 51 TAACGAAACAGTAGGGAACGCAGTCGCTTTAGCGAAAAAACCGAATTTTG 100
..|||||||.||.||.|||||.||.||...|||||||||||||||.||||
BL03467___pgm 51 GGACGAAACCGTCGGAAACGCCGTAGCCCAAGCGAAAAAACCGAACTTTG 100
BSNT_05131___ 101 ACCGCTATTGGAACCAGTATCCTCATCAAACATTGACTGCTTCAGGCGAG 150
||||||||||||||.|||||||.||.||.||..||||.||||||||.||.
BL03467___pgm 101 ACCGCTATTGGAACAAGTATCCGCACCAGACGCTGACAGCTTCAGGAGAA 150
BSNT_05131___ 151 GCTGTAGGTCTTCCTGAAGGGCAAATGGGGAACTCCGAAGTAGGTCACTT 200
||.|||||||||||.||.||.||.|||||.|||||.|||||.||.||..|
BL03467___pgm 151 GCGGTAGGTCTTCCAGACGGCCAGATGGGCAACTCGGAAGTCGGCCATCT 200
BSNT_05131___ 201 AAATATCGGTGCGGGACGTATTGTGTACCAAAGCTTAACACGCGTAAATG 250
.||||||||.||.||.||.||.||.||||||||..|.||.|||||.||.|
BL03467___pgm 201 GAATATCGGCGCAGGCCGGATCGTTTACCAAAGTCTGACGCGCGTGAACG 250
BSNT_05131___ 251 TTGCCATTCGTGAAGGAGAGTTCGAACGCAATCAAACATTCCTTGACGCG 300
||||.|||||.||.|||||.|||||||..||..||||||||||||..|||
BL03467___pgm 251 TTGCGATTCGCGAGGGAGAATTCGAACAGAACGAAACATTCCTTGCAGCG 300
BSNT_05131___ 301 AT-CAGCAACGCGAAAGAAAACA---ACAAAGCCTTGCACCTGTTCGGTC 346
|| .||| |||.||||||||| | ||||| |.|.|||.|||||||.|
BL03467___pgm 301 ATGAAGC-ACGTGAAAGAAAA-AGGCACAAA--CCTCCACTTGTTCGGAC 346
BSNT_05131___ 347 TTTTATCTGACGGAGGCGTGCACAGCCATATCAATCATTTATTCGCACTG 396
|..|.||||||||.||.|||||||||||.||..|.|||||||..|||||.
BL03467___pgm 347 TGCTGTCTGACGGCGGAGTGCACAGCCACATTCACCATTTATATGCACTC 396
BSNT_05131___ 397 TTAAAGCTTGCGAAAAAAGAAGG-GCTGACAGAGGTTTATATCCATGGCT 445
||.||.|||||.||||||||||| |.||| |.|.||.|||||.||.||||
BL03467___pgm 397 TTGAAACTTGCCAAAAAAGAAGGCGTTGA-AAACGTCTATATTCACGGCT 445
BSNT_05131___ 446 TCCTTGACGGCCGTGATGTAGGTCCGCAGACAGC-GAAAACGTACATCAA 494
|||||||||||||.||||||||.|||||.||||| ||.|| |||||||||
BL03467___pgm 446 TCCTTGACGGCCGCGATGTAGGCCCGCAAACAGCTGAGAA-GTACATCAA 494
BSNT_05131___ 495 CCAGTTGAACGATCAAATCAAGGAAATCGGTGTAGGTGAAATCGCCAGCA 544
..||.|..|.|||||||||.|.||||||||.||.||.||.|||| ||.||
BL03467___pgm 495 AGAGCTTCAGGATCAAATCGAAGAAATCGGCGTCGGCGAGATCG-CAACA 543
BSNT_05131___ 545 TT-TCCGGACGTTACTACTCTATGGACCGCGACAAACGCTGGGACCGTGT 593
|| ||.||.||.|||||.||.||||||||.|||||.|||||||||||.||
BL03467___pgm 544 TTGTCAGGCCGCTACTATTCAATGGACCGAGACAAGCGCTGGGACCGCGT 593
BSNT_05131___ 594 AGAAAAAGCGTACCGCGCAATGGCGTACGGCGAAGGCCC-----ATCTTA 638
.|||||||||||||||||.|||||.|||||.||.||.|| |||..|
BL03467___pgm 594 CGAAAAAGCGTACCGCGCCATGGCATACGGAGAGGGACCGAAATATCAAA 643
BSNT_05131___ 639 --CCGCAGCGCCCTGGATGTTGTTGATGATTCATATGCAAATGGTATCTA 686
||| ||.|||||.||..|.|||||.||||.|||.||.||.||
BL03467___pgm 644 ATCCG-------CTCGATGTCGTGAAAGATTCTTATGAAAACGGAATTTA 686
BSNT_05131___ 687 CGATGAATTCGTGATTCCATCTGTCATCACAAAAGAAAACGGTGAGCCTG 736
||||||||||||||||||.||.|||||.||.|||||||||||.||.||||
BL03467___pgm 687 CGATGAATTCGTGATTCCTTCCGTCATTACGAAAGAAAACGGCGAACCTG 736
BSNT_05131___ 737 TTGCGAAAATCCAAGACGGCGATTCTGTGATTTTCTATAATTTCAGACCG 786
||||||.||||.|.|||..||||.|.||.||||||||.||.||||||||.
BL03467___pgm 737 TTGCGACAATCAAGGACAACGATGCGGTCATTTTCTACAACTTCAGACCC 786
BSNT_05131___ 787 GACCGCGCCATCCAGATTTCCAACACGTTCACAAACAAAGACTTCCGTGA 836
|||||.||.|||||||||||||||||||||||.||..|.||||||||.||
BL03467___pgm 787 GACCGTGCGATCCAGATTTCCAACACGTTCACCAATGACGACTTCCGCGA 836
BSNT_05131___ 837 CTTCGACCGCGGCGAGAATTATCCAAAGAACCTGTATTTCGTCTGCCTGA 886
||||||||||||.||.||..||||.||.|||||..|||||||.|||.|||
BL03467___pgm 837 CTTCGACCGCGGAGACAAGCATCCGAAAAACCTTCATTTCGTTTGCTTGA 886
BSNT_05131___ 887 CTCACTTCAGTGAAACAGTTGACGGCTATGTAGCGTTTAAACCGATAAAT 936
|.||.|||||||||||.||||||||.||.||.||.||.||||||.|.|||
BL03467___pgm 887 CACATTTCAGTGAAACGGTTGACGGATACGTGGCATTCAAACCGGTCAAT 936
BSNT_05131___ 937 CTTGATAACACAGTCGGAGAAGTATTATCTCAGCACGGGTTAAAACAGCT 986
||.||.|||||||||||.|||||.|||||.||..|||||.|.||.|||||
BL03467___pgm 937 CTCGACAACACAGTCGGCGAAGTTTTATCCCAAAACGGGCTGAAGCAGCT 986
BSNT_05131___ 987 TCGAATTGCAGAAACTGAAAAGTATCCGCACGTCACGTTCTTTATGAGCG 1036
|||.||.||.|||||||||||.||||||||||||||.|||||||||||||
BL03467___pgm 987 TCGCATCGCTGAAACTGAAAAATATCCGCACGTCACATTCTTTATGAGCG 1036
BSNT_05131___ 1037 GCGGCCGTGAAGCTGAATTCCCGGGTGAAGAGCGTATTCTCATCAACTCG 1086
||||.||.||||...|.||||||||.||||||||.||..|.|||.|||||
BL03467___pgm 1037 GCGGACGCGAAGAAAAGTTCCCGGGCGAAGAGCGAATCTTAATCGACTCG 1086
BSNT_05131___ 1087 CCTAAAGTTGCAACGTATGACTTGAAGCCTGAGATGAGTGCGTATGAAGT 1136
||||||||.|||||.|||||||||||.|||||.|||||.||.||||||||
BL03467___pgm 1087 CCTAAAGTCGCAACATATGACTTGAAACCTGAAATGAGCGCATATGAAGT 1136
BSNT_05131___ 1137 GAAAGACGCGCTTGTCAAAGAAATTGAAGCTGACAAGCATGACGCGATCA 1186
.|||||.||||||||||||||||||||.|||||.||||||.|||||||||
BL03467___pgm 1137 AAAAGATGCGCTTGTCAAAGAAATTGAGGCTGAAAAGCATAACGCGATCA 1186
BSNT_05131___ 1187 TTCTTAACTTCGCAAACCCTGATATGGTCGGCCACTCCGGAATGGTTGAA 1236
|.||.|||||.||.||||||||.|||||.||.||.||.||||..||.||.
BL03467___pgm 1187 TCCTCAACTTTGCCAACCCTGACATGGTTGGACATTCAGGAAAAGTCGAG 1236
BSNT_05131___ 1237 CCAACAATTAAAGCAATTGAAGCAGTGGACGAATGCTTGGGCGAAGTCGT 1286
||.||..|.||||||||.|||||.||.|||||.|||.|.|||||||||||
BL03467___pgm 1237 CCGACGGTCAAAGCAATCGAAGCGGTTGACGAGTGCCTCGGCGAAGTCGT 1286
BSNT_05131___ 1287 TGACGCGATCCTTGCTAAAGGCGGACACGCTATCATTACCGCTGATCACG 1336
|||.|||||.|||||.||||||||..||||.||.|||||.||.||.||||
BL03467___pgm 1287 TGATGCGATTCTTGCAAAAGGCGGCTACGCGATTATTACGGCCGACCACG 1336
BSNT_05131___ 1337 GTAATGCTGACATTCTGATTACAGAATCAGGCGAACCGCACACTGCGCAT 1386
||||.||.|||.|.||||||||.|||..||||.|.||||||||.||.|||
BL03467___pgm 1337 GTAACGCAGACGTGCTGATTACCGAAGAAGGCAAGCCGCACACCGCACAT 1386
BSNT_05131___ 1387 ACAACAAACCCAGTCCCTGTGATTGTAACGAAAGAAGGCATTACGCTGCG 1436
||.||||||||.||.|||||.||.||.||.|||||||||.|.||..|..|
BL03467___pgm 1387 ACGACAAACCCGGTTCCTGTCATCGTCACAAAAGAAGGCGTGACATTAAG 1436
BSNT_05131___ 1437 TGAAGGCGGAATCCTAGGCGACCTTGCACCAACGTTATTAGACCTTCTTG 1486
.||||||||||||||.||.||.||.||.|||||..|.||||||.|.||.|
BL03467___pgm 1437 AGAAGGCGGAATCCTCGGGGATCTGGCGCCAACTCTTTTAGACTTGCTGG 1486
BSNT_05131___ 1487 GTGTTGAAAAACCGAAAGAAATGACAGGAACATCTTTAATTCAAAAATAA 1536
|||||||||||||||||||||||||||||.|.||.|||||||||||||||
BL03467___pgm 1487 GTGTTGAAAAACCGAAAGAAATGACAGGATCGTCATTAATTCAAAAATAA 1536
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