Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05133 and BL03465
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence dna-align/BSNT_05133___pgk.1.5803.seq
# -bsequence dna-align/BL03465___pgk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05133___pgk-BL03465___pgk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05133___pgk-BL03465___pgk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05133___pgk
# 2: BL03465___pgk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1187
# Identity: 973/1187 (82.0%)
# Similarity: 973/1187 (82.0%)
# Gaps: 4/1187 ( 0.3%)
# Score: 4004.0
#
#
#=======================================
BSNT_05133___ 1 ATGAATAAAAAAACTCTCAAAGACATCGACGTAAAAGGCAAAGTTGTATT 50
|||||.||||||.|..|.||||||||.||.|||||||||...|||||.||
BL03465___pgk 1 ATGAACAAAAAATCAGTAAAAGACATTGATGTAAAAGGCCGCGTTGTTTT 50
BSNT_05133___ 51 CTGCCGCGTCGACTTTAACGTTCCAATGAAAGACGGGGAAGTAACAGACG 100
||||||.||.||||||||||||||.|||||.|||||..||||.||.||.|
BL03465___pgk 51 CTGCCGTGTTGACTTTAACGTTCCGATGAAGGACGGAAAAGTGACGGATG 100
BSNT_05133___ 101 ATACACGTATCCGTGCTGCGCTTCCAACAATCAAACACCTTGCAGACCAA 150
||||..|.|||||.||.||.|||||.||.||..||.||.|..||||.||.
BL03465___pgk 101 ATACGAGAATCCGCGCCGCACTTCCGACGATTCAATACTTAACAGAGCAG 150
BSNT_05133___ 151 GGCGCGAAAGTCCTTCTTGCGAGCCACTTAGGCCGCCCGAAAGGCGAAGT 200
||.||||||||.||||||||.||||||||.|||||.|||||||||.|.||
BL03465___pgk 151 GGAGCGAAAGTTCTTCTTGCAAGCCACTTGGGCCGTCCGAAAGGCCAGGT 200
BSNT_05133___ 201 GGTTGAGGAGCTTCGTTTAACTCCTGTCGCTGCACGTCTCGGCGAACTGC 250
|...||.||||||||.|||||.||.||.||.|||||.||||||||||||.
BL03465___pgk 201 GTCAGAAGAGCTTCGCTTAACGCCGGTAGCCGCACGCCTCGGCGAACTGA 250
BSNT_05133___ 251 TTGGAAAAGAAGTGAAAAAAGCGGATGAAGCATACGGCGATGCTGTAAAA 300
|.||.||||||||||||||||||||||||||.||||||||.||.||.|||
BL03465___pgk 251 TCGGCAAAGAAGTGAAAAAAGCGGATGAAGCTTACGGCGACGCCGTCAAA 300
BSNT_05133___ 301 GCACAAATTTCCGAGATGAAGGACGGAGACGTTCTTGTATTGGAAAACGT 350
||.|||||||||||.|||||.||||||||..||||.|||||||||||.||
BL03465___pgk 301 GCGCAAATTTCCGAAATGAAAGACGGAGATATTCTCGTATTGGAAAATGT 350
BSNT_05133___ 351 ACGTTTCTATCCTGGTGAAGAGAAAAATGACCCTGAACTTGCAAAAGCAT 400
.||.||||||||.||.|||||.||.|||||.|||||.|||.|.|||||.|
BL03465___pgk 351 CCGCTTCTATCCGGGAGAAGAAAAGAATGATCCTGAGCTTTCTAAAGCGT 400
BSNT_05133___ 401 TTGCTGAGCTTGCAGATGTATATGTAAATGACGCATTCGGTGCTGCCCAC 450
||||.||.||.||.||.||.|||||.|||||.||||||||.||.||.|||
BL03465___pgk 401 TTGCCGACCTGGCTGACGTTTATGTCAATGATGCATTCGGAGCGGCTCAC 450
BSNT_05133___ 451 CGTGCTCACGCATCTACAGCTGGAATTGCCGAGCATCTGCCAGCAGTTGC 500
||.||.||.||.||.|||||.||.||.||.||.||.||.||.||.|||||
BL03465___pgk 451 CGCGCCCATGCTTCAACAGCAGGCATCGCTGAACACCTTCCGGCTGTTGC 500
BSNT_05133___ 501 AGGTTTCTTAATGGAAAAAGAGCTTGATGTACTTGGAAAAGCGGTTTCCA 550
|||.|||.|.|||||||||||||||||.||.||.||.||||||.|.||.|
BL03465___pgk 501 AGGCTTCCTCATGGAAAAAGAGCTTGAAGTGCTGGGCAAAGCGCTGTCAA 550
BSNT_05133___ 551 ATCCTGACCGCCCGTTCACAGCGATCATCGGCGGAGCGAAAGTAAAAGAC 600
|.|||||.||.|||||.|||||||||||||||||.||.||||||||||||
BL03465___pgk 551 ACCCTGAACGTCCGTTTACAGCGATCATCGGCGGCGCAAAAGTAAAAGAC 600
BSNT_05133___ 601 AAAATCGGTGTAATCGAAAGTCTTCTTGATAAAGTAGACAACCTGATCAT 650
||||||||.||.||.||||||||||||||.||||||||||||||||||||
BL03465___pgk 601 AAAATCGGCGTGATTGAAAGTCTTCTTGAGAAAGTAGACAACCTGATCAT 650
BSNT_05133___ 651 CGGCGGAGGTCTTGCTTATACTTTCGTAAAAGCGCTTGGCTATGAAGTCG 700
||||||.|||||||||||.||.|||||.||||||||.|||.|||||||.|
BL03465___pgk 651 CGGCGGCGGTCTTGCTTACACGTTCGTCAAAGCGCTCGGCCATGAAGTGG 700
BSNT_05133___ 701 GTAAATCTCTTCTTGAAGAGGATAAAATCGAGCTTGCGAAATCATTTATG 750
|.|||||.||.||.|||||.||||||||.||..|.||.|||||.||.|||
BL03465___pgk 701 GAAAATCCCTGCTGGAAGAAGATAAAATTGAATTGGCTAAATCTTTCATG 750
BSNT_05133___ 751 GACCGCGCTAAAGAAAAAGGCGTTAACTTCTACATGCCTGAAGATGTACT 800
||||||||.||||||||||||||.|||||||||||||||..|||.||.||
BL03465___pgk 751 GACCGCGCCAAAGAAAAAGGCGTGAACTTCTACATGCCTACAGACGTGCT 800
BSNT_05133___ 801 CGTTGCAGATGATTTCTCTAACGATGCAAACGTGAAAATTGTGCCGATCT 850
.|||||.||.||||||||.|||||.||.|||..||||||.||||||.|..
BL03465___pgk 801 TGTTGCTGACGATTTCTCAAACGACGCCAACACGAAAATCGTGCCGGTAA 850
BSNT_05133___ 851 CTGAAATCCCTAGTGATTTAGAAGCAATCGACATTGGTACGA--AAACAC 898
..|||||||||||.||.|..|||||..|.|||||.|| ||| |||||.
BL03465___pgk 851 GCGAAATCCCTAGCGACTGGGAAGCGCTTGACATCGG--CGAGGAAACAA 898
BSNT_05133___ 899 GCGAAACGTATGCTGACGTCATCAAAAACAGCAAACTTGTCGTGTGGAAC 948
|..||||.|||||.||||||||||||||||||||.||||||||.||||||
BL03465___pgk 899 GAAAAACATATGCCGACGTCATCAAAAACAGCAAGCTTGTCGTTTGGAAC 948
BSNT_05133___ 949 GGACCAATGGGCGTATTCGAAATCGACTTGTTCGCTCAAGGAACAAAAGC 998
|||||.|||||||||||||||||||||..|||||||.|||||||||.|||
BL03465___pgk 949 GGACCGATGGGCGTATTCGAAATCGACGCGTTCGCTAAAGGAACAAGAGC 998
BSNT_05133___ 999 GGTTGCGGAAGCATTGGCAGAGGCGAAAGATACATACTCTGTCATCGGCG 1048
.||.||.||||||||.||||||||.||.||||||||||||||||||||||
BL03465___pgk 999 TGTCGCTGAAGCATTAGCAGAGGCAAATGATACATACTCTGTCATCGGCG 1048
BSNT_05133___ 1049 GAGGAGACTCTGCGGCAGCGGTTGAAAAATTCGGCCTTGCTGACAAAATG 1098
|.|||||||||||.||.||.||.|||||.||||||.|.||||||||||||
BL03465___pgk 1049 GCGGAGACTCTGCAGCTGCTGTAGAAAAGTTCGGCTTGGCTGACAAAATG 1098
BSNT_05133___ 1099 AGCCACATCTCAACAGGCGGCGGCGCATCCCTTGAGTTTATGGAAGGCAA 1148
||||||||.||||||||||||||.||.||||||||||||||||||||.||
BL03465___pgk 1099 AGCCACATTTCAACAGGCGGCGGAGCTTCCCTTGAGTTTATGGAAGGAAA 1148
BSNT_05133___ 1149 AGAGCTTCCAGGGGTAGCTGCACTGAACGATAAATAA 1185
|||.|||||.||.||....|||.|||||||.||.|||
BL03465___pgk 1149 AGAACTTCCTGGCGTCAAAGCATTGAACGACAAGTAA 1185
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